Wall clock time and date at job start Tue Mar 9 2021 13:01:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47524 * 2 1 4 4 C 1.50705 * 109.47170 * 119.99585 * 2 1 3 5 5 C 1.34235 * 126.50377 * 255.02834 * 4 2 1 6 6 N 1.36835 * 109.93739 * 179.97438 * 5 4 2 7 7 C 1.46501 * 125.05899 * 180.02562 * 6 5 4 8 8 C 1.50699 * 109.47261 * 264.97546 * 7 6 5 9 9 O 1.21285 * 119.99900 * 359.97438 * 8 7 6 10 10 N 1.34772 * 120.00186 * 180.02562 * 8 7 6 11 11 C 1.46505 * 120.00009 * 179.97438 * 10 8 7 12 12 H 1.08988 * 112.85020 * 25.33235 * 11 10 8 13 13 C 1.53777 * 113.61219 * 156.52841 * 11 10 8 14 14 C 1.53779 * 87.08241 * 89.11571 * 13 11 10 15 15 H 1.08999 * 113.61431 * 270.79638 * 14 13 11 16 16 C 1.50707 * 113.61548 * 139.98061 * 14 13 11 17 17 C 1.38173 * 119.98341 * 299.72654 * 16 14 13 18 18 C 1.38479 * 119.97060 * 179.72815 * 17 16 14 19 19 F 1.35098 * 120.02733 * 180.25012 * 18 17 16 20 20 C 1.38447 * 119.94922 * 0.54589 * 18 17 16 21 21 C 1.38221 * 119.97118 * 359.72660 * 20 18 17 22 22 C 1.38221 * 120.02722 * 359.97438 * 21 20 18 23 23 C 1.53785 * 113.61256 * 254.13149 * 11 10 8 24 24 C 1.37693 * 109.87519 * 359.97438 * 6 5 4 25 25 C 1.39080 * 133.50925 * 180.02562 * 24 6 5 26 26 C 1.37790 * 119.77552 * 179.97438 * 25 24 6 27 27 C 1.38793 * 120.66437 * 0.02562 * 26 25 24 28 28 C 1.36654 * 120.53129 * 359.97438 * 27 26 25 29 29 C 1.39595 * 119.76204 * 359.97438 * 28 27 26 30 30 H 0.96701 * 113.99574 * 300.00192 * 1 2 3 31 31 H 1.09002 * 109.47482 * 239.99516 * 2 1 3 32 32 H 1.48507 * 109.99779 * 300.00238 * 3 2 1 33 33 H 1.48497 * 109.99978 * 61.31247 * 3 2 1 34 34 H 1.07997 * 125.02551 * 0.23363 * 5 4 2 35 35 H 1.08998 * 109.47236 * 24.97781 * 7 6 5 36 36 H 1.09003 * 109.46956 * 144.97590 * 7 6 5 37 37 H 0.97002 * 119.99757 * 359.97438 * 10 8 7 38 38 H 1.09000 * 113.61506 * 203.66246 * 13 11 10 39 39 H 1.09002 * 113.61908 * 334.56963 * 13 11 10 40 40 H 1.07996 * 120.01512 * 359.97438 * 17 16 14 41 41 H 1.08001 * 120.01456 * 179.70616 * 20 18 17 42 42 H 1.07993 * 119.98140 * 180.02562 * 21 20 18 43 43 H 1.07994 * 119.97180 * 179.97438 * 22 21 20 44 44 H 1.09002 * 113.61285 * 25.43871 * 23 11 10 45 45 H 1.09002 * 113.60750 * 156.33565 * 23 11 10 46 46 H 1.08002 * 120.11621 * 359.97438 * 25 24 6 47 47 H 1.07997 * 119.66858 * 180.02562 * 26 25 24 48 48 H 1.08007 * 119.73020 * 180.02562 * 27 26 25 49 49 H 1.07999 * 120.12251 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.4604 -0.1375 2.3232 6 7 2.8020 -1.0989 3.2350 7 6 3.4057 -0.8401 4.5445 8 6 4.9041 -0.9625 4.4400 9 8 5.4171 -1.2392 3.3764 10 7 5.6739 -0.7656 5.5285 11 6 7.1305 -0.8852 5.4269 12 1 7.5014 -0.6975 4.4194 13 6 7.8897 -0.1104 6.5170 14 6 7.7920 -1.3810 7.3777 15 1 6.8899 -1.4269 7.9876 16 6 9.0444 -1.6766 8.1621 17 6 10.2384 -1.8928 7.5011 18 6 11.3902 -2.1588 8.2224 19 9 12.5591 -2.3654 7.5774 20 6 11.3416 -2.2189 9.6047 21 6 10.1449 -2.0078 10.2634 22 6 8.9972 -1.7363 9.5427 23 6 7.6886 -2.1711 6.0593 24 6 2.4928 -2.3456 2.7389 25 6 2.6270 -3.6359 3.2403 26 6 2.2127 -4.7105 2.4838 27 6 1.6622 -4.5191 1.2241 28 6 1.5210 -3.2600 0.7122 29 6 1.9331 -2.1569 1.4619 30 1 -0.3933 0.4417 0.7651 31 1 1.7924 -0.5139 -0.8899 32 1 1.5616 2.4679 -1.2085 33 1 1.5879 2.4586 1.2241 34 1 2.5925 0.9251 2.4636 35 1 3.1454 0.1663 4.8722 36 1 3.0314 -1.5655 5.2669 37 1 5.2635 -0.5447 6.3792 38 1 8.9105 0.1499 6.2370 39 1 7.3319 0.7345 6.9209 40 1 10.2741 -1.8505 6.4225 41 1 12.2383 -2.4310 10.1680 42 1 10.1069 -2.0543 11.3417 43 1 8.0626 -1.5719 10.0582 44 1 6.9686 -2.9887 6.0939 45 1 8.6545 -2.4731 5.6543 46 1 3.0546 -3.7952 4.2192 47 1 2.3174 -5.7117 2.8749 48 1 1.3420 -5.3722 0.6443 49 1 1.0913 -3.1186 -0.2685 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:53 Heat of formation + Delta-G solvation = 14.885503 kcal Electronic energy + Delta-G solvation = -33457.975321 eV Core-core repulsion = 28846.654026 eV Total energy + Delta-G solvation = -4611.321295 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -49.84707 -42.51950 -41.65670 -40.30321 -38.83395 -38.03441 -37.56816 -34.80291 -34.01151 -32.07865 -31.58975 -31.25899 -30.13661 -28.99796 -26.95302 -26.58007 -25.61093 -23.95135 -23.62718 -22.96297 -22.59216 -21.87663 -20.63356 -20.41533 -18.94628 -18.53766 -18.32846 -17.71250 -17.39112 -17.33611 -17.13303 -16.83099 -16.56530 -16.37483 -16.30091 -16.08184 -15.75261 -15.56544 -15.37020 -15.08652 -14.94981 -14.70369 -14.61450 -14.34697 -14.30875 -14.00471 -14.00353 -13.77913 -13.58166 -13.33918 -13.09375 -13.00979 -12.61738 -12.58317 -12.46479 -12.29363 -12.17273 -11.90203 -11.89150 -11.63742 -11.40550 -11.14228 -10.43919 -10.36144 -10.29594 -9.99274 -9.69715 -9.03818 -8.54799 -4.87144 0.07888 0.13113 0.26545 0.78215 1.33698 1.37328 1.39324 1.61070 1.68358 2.01923 2.04964 2.46093 3.09820 3.11861 3.28275 3.36530 3.42200 3.45865 3.53131 3.58117 3.65421 3.71671 3.74620 3.78109 3.84621 3.94246 4.01680 4.05091 4.09432 4.28651 4.30571 4.35784 4.42700 4.52256 4.58647 4.61287 4.66762 4.71422 4.76830 4.79629 4.80156 4.89370 4.90534 4.98421 4.98850 5.07810 5.23030 5.24672 5.33240 5.44641 5.63595 5.79656 5.83113 5.85164 5.88942 6.11433 6.28677 6.35000 6.58817 6.96204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.192 4.192 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.494 3.506 9 O -0.508 6.508 10 N -0.712 5.712 11 C 0.121 3.879 12 H 0.107 0.893 13 C -0.134 4.134 14 C -0.074 4.074 15 H 0.102 0.898 16 C -0.044 4.044 17 C -0.153 4.153 18 C 0.102 3.898 19 F -0.138 7.138 20 C -0.158 4.158 21 C -0.087 4.087 22 C -0.127 4.127 23 C -0.144 4.144 24 C 0.109 3.891 25 C -0.128 4.128 26 C -0.096 4.096 27 C -0.146 4.146 28 C -0.065 4.065 29 C -0.086 4.086 30 H 0.372 0.628 31 H 0.114 0.886 32 H -0.256 1.256 33 H -0.260 1.260 34 H 0.168 0.832 35 H 0.122 0.878 36 H 0.118 0.882 37 H 0.402 0.598 38 H 0.100 0.900 39 H 0.079 0.921 40 H 0.136 0.864 41 H 0.135 0.865 42 H 0.134 0.866 43 H 0.129 0.871 44 H 0.076 0.924 45 H 0.096 0.904 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.088 2.219 7.078 7.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.584 3.416 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.278 3.722 9 O -0.381 6.381 10 N -0.365 5.365 11 C 0.015 3.985 12 H 0.125 0.875 13 C -0.172 4.172 14 C -0.093 4.093 15 H 0.120 0.880 16 C -0.044 4.044 17 C -0.171 4.171 18 C 0.083 3.917 19 F -0.117 7.117 20 C -0.177 4.177 21 C -0.105 4.105 22 C -0.145 4.145 23 C -0.182 4.182 24 C 0.004 3.996 25 C -0.148 4.148 26 C -0.115 4.115 27 C -0.165 4.165 28 C -0.083 4.083 29 C -0.090 4.090 30 H 0.220 0.780 31 H 0.132 0.868 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.185 0.815 35 H 0.140 0.860 36 H 0.136 0.864 37 H 0.237 0.763 38 H 0.118 0.882 39 H 0.098 0.902 40 H 0.154 0.846 41 H 0.153 0.847 42 H 0.152 0.848 43 H 0.147 0.853 44 H 0.095 0.905 45 H 0.115 0.885 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.513 2.631 5.978 6.552 hybrid contribution -0.772 -0.177 1.181 1.422 sum -0.259 2.454 7.159 7.573 Atomic orbital electron populations 1.86608 1.18153 1.79965 1.48954 1.24284 0.83281 1.09828 0.97365 0.95022 0.91783 0.74458 0.80372 1.20585 1.09742 0.92353 0.97327 1.21578 1.00934 0.94001 0.89384 1.43194 1.52607 1.04689 1.14433 1.21577 0.90732 1.05837 0.85305 1.21009 0.89452 0.77386 0.84400 1.90824 1.74435 1.45113 1.27741 1.45628 1.06455 1.72364 1.12058 1.21857 0.79469 0.96475 1.00686 0.87538 1.23422 1.01835 0.96585 0.95361 1.21687 0.95493 0.97192 0.94885 0.88006 1.19506 0.93904 0.97486 0.93505 1.20997 0.91419 1.03803 1.00904 1.17718 0.81656 1.01634 0.90666 1.91529 1.45982 1.92350 1.81842 1.21229 1.00053 1.03784 0.92615 1.21054 0.91663 0.97334 1.00455 1.21136 0.98919 1.01113 0.93348 1.23622 1.02470 0.97364 0.94780 1.18165 1.01220 0.85826 0.94339 1.19947 1.05021 0.89251 1.00625 1.20829 0.98294 0.97934 0.94483 1.20676 1.02424 0.96960 0.96399 1.20311 0.97915 0.90911 0.99181 1.18937 1.03382 0.92776 0.93912 0.78045 0.86777 1.18024 1.18540 0.81453 0.85979 0.86431 0.76325 0.88163 0.90199 0.84610 0.84661 0.84835 0.85340 0.90508 0.88524 0.86778 0.85734 0.85913 0.85897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.34 12.88 -35.23 -0.45 -1.79 16 2 C -0.04 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.14 30.82 -169.99 -5.24 -5.38 16 4 C -0.19 -0.44 5.57 -102.71 -0.57 -1.01 16 5 C 0.07 0.05 9.89 -16.73 -0.17 -0.12 16 6 N -0.47 -0.43 2.27 -115.71 -0.26 -0.69 16 7 C 0.09 -0.27 6.48 -5.19 -0.03 -0.31 16 8 C 0.49 -0.40 7.90 -10.99 -0.09 -0.48 16 9 O -0.51 -2.17 16.04 5.55 0.09 -2.08 16 10 N -0.71 2.57 5.26 -53.02 -0.28 2.29 16 11 C 0.12 -0.30 4.30 -67.12 -0.29 -0.59 16 12 H 0.11 -0.04 7.50 -51.94 -0.39 -0.43 16 13 C -0.13 0.51 7.29 -25.92 -0.19 0.32 16 14 C -0.07 0.26 3.87 -90.82 -0.35 -0.09 16 15 H 0.10 -0.50 8.09 -51.93 -0.42 -0.92 16 16 C -0.04 0.07 5.29 -104.63 -0.55 -0.48 16 17 C -0.15 0.05 8.61 -39.52 -0.34 -0.29 16 18 C 0.10 0.12 7.30 -39.42 -0.29 -0.17 16 19 F -0.14 -0.38 17.27 2.25 0.04 -0.34 16 20 C -0.16 0.01 10.03 -39.51 -0.40 -0.39 16 21 C -0.09 0.12 10.04 -39.59 -0.40 -0.28 16 22 C -0.13 0.23 9.71 -39.58 -0.38 -0.15 16 23 C -0.14 0.35 7.27 -25.78 -0.19 0.16 16 24 C 0.11 0.34 6.80 -83.99 -0.57 -0.23 16 25 C -0.13 -0.30 10.00 -39.43 -0.39 -0.69 16 26 C -0.10 -0.20 10.01 -39.54 -0.40 -0.59 16 27 C -0.15 -0.36 9.97 -39.95 -0.40 -0.76 16 28 C -0.06 -0.23 10.05 -39.65 -0.40 -0.63 16 29 C -0.09 -0.34 6.35 -105.14 -0.67 -1.01 16 30 H 0.37 -0.21 8.70 45.56 0.40 0.19 16 31 H 0.11 0.15 7.96 -51.93 -0.41 -0.26 16 32 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 33 H -0.26 -0.16 6.99 56.52 0.40 0.24 16 34 H 0.17 -0.32 6.27 -52.49 -0.33 -0.65 16 35 H 0.12 -0.75 8.12 -51.93 -0.42 -1.17 16 36 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 37 H 0.40 -2.68 8.70 -40.82 -0.36 -3.03 16 38 H 0.10 -0.33 7.73 -51.93 -0.40 -0.73 16 39 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 40 H 0.14 -0.18 6.64 -52.49 -0.35 -0.53 16 41 H 0.14 -0.17 8.06 -52.49 -0.42 -0.59 16 42 H 0.13 -0.45 8.06 -52.49 -0.42 -0.87 16 43 H 0.13 -0.49 8.05 -52.49 -0.42 -0.91 16 44 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.10 -0.20 6.30 -51.93 -0.33 -0.52 16 46 H 0.11 0.04 8.06 -52.49 -0.42 -0.38 16 47 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 48 H 0.12 0.07 8.06 -52.48 -0.42 -0.35 16 49 H 0.12 0.32 8.06 -52.49 -0.42 -0.11 16 LS Contribution 415.28 15.07 6.26 6.26 Total: 0.00 -10.41 415.28 -13.24 -23.65 By element: Atomic # 1 Polarization: -7.74 SS G_CDS: -6.44 Total: -14.19 kcal Atomic # 6 Polarization: -0.78 SS G_CDS: -6.95 Total: -7.73 kcal Atomic # 7 Polarization: 2.14 SS G_CDS: -0.54 Total: 1.60 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.36 Total: -3.87 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.24 Total: -5.38 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -10.41 -13.24 -23.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.536 kcal (2) G-P(sol) polarization free energy of solvation -10.410 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.126 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.240 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.650 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds