Wall clock time and date at job start Tue Mar 9 2021 13:02:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47081 * 2 1 4 4 C 1.50699 * 109.47415 * 239.99734 * 2 1 3 5 5 C 1.38241 * 119.99846 * 300.00267 * 4 2 1 6 6 C 1.38228 * 119.99721 * 180.02562 * 5 4 2 7 7 C 1.38233 * 120.00320 * 359.95047 * 6 5 4 8 8 C 1.50701 * 120.00193 * 180.02562 * 7 6 5 9 9 C 1.50701 * 109.47110 * 90.00281 * 8 7 6 10 10 O 1.21286 * 119.99554 * 359.97438 * 9 8 7 11 11 N 1.34776 * 120.00433 * 180.02562 * 9 8 7 12 12 C 1.46492 * 120.00368 * 179.97438 * 11 9 8 13 13 H 1.09005 * 112.84630 * 23.80070 * 12 11 9 14 14 C 1.53776 * 113.61713 * 154.99951 * 12 11 9 15 15 C 1.53785 * 87.08214 * 89.20038 * 14 12 11 16 16 H 1.08998 * 113.61399 * 270.79902 * 15 14 12 17 17 C 1.50701 * 113.61212 * 139.98431 * 15 14 12 18 18 C 1.38217 * 120.00041 * 299.99490 * 17 15 14 19 19 C 1.38256 * 120.00087 * 179.97438 * 18 17 15 20 20 C 1.38215 * 119.99734 * 0.05278 * 19 18 17 21 21 C 1.38253 * 120.00294 * 359.97438 * 20 19 18 22 22 C 1.50696 * 119.99941 * 180.02562 * 21 20 19 23 23 F 1.39891 * 109.47206 * 359.97438 * 22 21 20 24 24 F 1.39900 * 109.47125 * 120.00017 * 22 21 20 25 25 F 1.39901 * 109.46951 * 239.99734 * 22 21 20 26 26 C 1.38212 * 119.99859 * 359.97438 * 21 20 19 27 27 C 1.53782 * 113.69314 * 252.53735 * 12 11 9 28 28 C 1.38235 * 119.99981 * 0.28087 * 7 6 5 29 29 C 1.38233 * 119.99822 * 359.53493 * 28 7 6 30 30 H 0.96690 * 114.00031 * 60.00421 * 1 2 3 31 31 H 1.09008 * 109.47050 * 119.99524 * 2 1 3 32 32 H 1.48501 * 110.00273 * 59.99504 * 3 2 1 33 33 H 1.48496 * 110.00119 * 181.31980 * 3 2 1 34 34 H 1.07997 * 119.99634 * 359.97438 * 5 4 2 35 35 H 1.08006 * 119.99634 * 179.97438 * 6 5 4 36 36 H 1.08998 * 109.47045 * 330.00233 * 8 7 6 37 37 H 1.08996 * 109.47402 * 210.00467 * 8 7 6 38 38 H 0.97000 * 119.99342 * 0.02562 * 11 9 8 39 39 H 1.09002 * 113.61481 * 334.65200 * 14 12 11 40 40 H 1.09000 * 113.69417 * 203.76714 * 14 12 11 41 41 H 1.08001 * 119.99701 * 0.02562 * 18 17 15 42 42 H 1.07995 * 120.00047 * 180.32212 * 19 18 17 43 43 H 1.08000 * 119.99306 * 179.97438 * 20 19 18 44 44 H 1.08000 * 119.99961 * 180.02562 * 26 21 20 45 45 H 1.08998 * 113.61411 * 156.32475 * 27 12 11 46 46 H 1.08999 * 113.61642 * 25.41790 * 27 12 11 47 47 H 1.08001 * 120.00143 * 179.72395 * 28 7 6 48 48 H 1.07998 * 120.00102 * 180.21322 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5974 -2.0340 -1.4491 6 6 2.0587 -2.6857 -2.5774 7 6 2.8531 -2.0139 -3.4876 8 6 3.3555 -2.7243 -4.7180 9 6 2.3627 -2.5514 -5.8385 10 8 1.3469 -1.9144 -5.6557 11 7 2.6030 -3.1055 -7.0434 12 6 1.6376 -2.9379 -8.1324 13 1 1.0107 -2.0546 -8.0100 14 6 2.2609 -3.0617 -9.5327 15 6 1.9735 -4.5697 -9.4413 16 1 2.7839 -5.1422 -8.9903 17 6 1.4817 -5.1698 -10.7333 18 6 0.3150 -4.7055 -11.3110 19 6 -0.1359 -5.2557 -12.4965 20 6 0.5794 -6.2707 -13.1034 21 6 1.7461 -6.7355 -12.5253 22 6 2.5263 -7.8418 -13.1873 23 9 1.8765 -8.2316 -14.3632 24 9 3.8129 -7.3861 -13.4940 25 9 2.6135 -8.9352 -12.3189 26 6 2.1974 -6.1848 -11.3407 27 6 0.8455 -4.2151 -8.4580 28 6 3.1910 -0.6918 -3.2665 29 6 2.7266 -0.0389 -2.1401 30 1 -0.3933 0.4416 -0.7650 31 1 1.7924 -0.5138 0.8901 32 1 1.5614 2.4680 1.2084 33 1 3.5346 1.7703 -0.0321 34 1 0.9768 -2.5588 -0.7380 35 1 1.7981 -3.7199 -2.7481 36 1 3.4770 -3.7855 -4.5007 37 1 4.3155 -2.3021 -5.0148 38 1 3.4149 -3.6159 -7.1891 39 1 3.3236 -2.8207 -9.5605 40 1 1.6916 -2.5550 -10.3119 41 1 -0.2439 -3.9124 -10.8367 42 1 -1.0447 -4.8894 -12.9506 43 1 0.2269 -6.7007 -14.0292 44 1 3.1090 -6.5476 -10.8893 45 1 -0.1119 -4.0236 -8.9425 46 1 0.7655 -4.9054 -7.6182 47 1 3.8154 -0.1682 -3.9753 48 1 2.9878 0.9950 -1.9690 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705318_12335836.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:33 Heat of formation + Delta-G solvation = -140.178079 kcal Electronic energy + Delta-G solvation = -34494.838719 eV Core-core repulsion = 29259.763603 eV Total energy + Delta-G solvation = -5235.075116 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.139 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -51.12188 -48.64440 -48.57892 -41.81908 -40.94512 -40.15686 -38.97530 -37.56378 -34.73853 -34.02243 -32.95518 -32.21630 -31.91999 -29.76223 -27.20335 -26.84274 -26.61559 -25.52944 -23.79710 -23.58720 -22.87783 -22.25941 -21.41416 -20.48032 -19.44497 -19.34342 -19.11130 -18.42700 -18.17571 -17.47029 -17.39814 -16.95531 -16.76457 -16.43990 -16.20766 -16.13833 -15.95041 -15.56496 -15.49716 -15.42173 -15.11981 -15.01845 -15.00308 -14.74917 -14.73510 -14.66186 -14.62187 -14.48784 -14.35048 -13.97245 -13.87529 -13.66367 -13.49976 -13.29901 -13.09187 -13.04439 -12.79273 -12.50919 -12.21039 -12.08314 -11.92940 -11.91743 -11.65918 -11.43737 -10.95154 -10.40110 -10.35161 -10.16345 -9.94603 -9.84639 -9.59258 -5.00120 -0.20747 0.07704 0.25523 0.48577 1.32842 1.57864 1.64684 1.65677 1.98205 2.00765 2.28971 2.70524 2.78759 2.99591 3.24292 3.41048 3.46687 3.48084 3.51252 3.56662 3.64123 3.72837 3.75632 3.85203 3.85711 3.89104 3.91660 4.03277 4.05459 4.22062 4.23430 4.34660 4.45733 4.47425 4.48026 4.53382 4.54123 4.67230 4.69982 4.71938 4.76107 4.83186 4.93178 5.00806 5.03187 5.08740 5.15025 5.28820 5.39359 5.47722 5.56628 5.59349 5.60220 6.01616 6.37765 6.61471 7.16552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.688 3.312 4 C -0.119 4.119 5 C -0.091 4.091 6 C -0.103 4.103 7 C -0.064 4.064 8 C -0.104 4.104 9 C 0.518 3.482 10 O -0.523 6.523 11 N -0.717 5.717 12 C 0.121 3.879 13 H 0.106 0.894 14 C -0.135 4.135 15 C -0.075 4.075 16 H 0.101 0.899 17 C -0.072 4.072 18 C -0.085 4.085 19 C -0.115 4.115 20 C -0.076 4.076 21 C -0.179 4.179 22 C 0.508 3.492 23 F -0.177 7.177 24 F -0.176 7.176 25 F -0.176 7.176 26 C -0.066 4.066 27 C -0.144 4.144 28 C -0.100 4.100 29 C -0.115 4.115 30 H 0.380 0.620 31 H 0.113 0.887 32 H -0.255 1.255 33 H -0.258 1.258 34 H 0.126 0.874 35 H 0.122 0.878 36 H 0.105 0.895 37 H 0.105 0.895 38 H 0.402 0.598 39 H 0.079 0.921 40 H 0.099 0.901 41 H 0.134 0.866 42 H 0.137 0.863 43 H 0.139 0.861 44 H 0.133 0.867 45 H 0.096 0.904 46 H 0.076 0.924 47 H 0.124 0.876 48 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.406 1.340 -2.480 3.150 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.590 3.410 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.121 4.121 7 C -0.065 4.065 8 C -0.143 4.143 9 C 0.304 3.696 10 O -0.398 6.398 11 N -0.369 5.369 12 C 0.015 3.985 13 H 0.124 0.876 14 C -0.173 4.173 15 C -0.093 4.093 16 H 0.119 0.881 17 C -0.072 4.072 18 C -0.103 4.103 19 C -0.133 4.133 20 C -0.095 4.095 21 C -0.181 4.181 22 C 0.453 3.547 23 F -0.158 7.158 24 F -0.158 7.158 25 F -0.158 7.158 26 C -0.084 4.084 27 C -0.182 4.182 28 C -0.118 4.118 29 C -0.133 4.133 30 H 0.227 0.773 31 H 0.130 0.870 32 H -0.180 1.180 33 H -0.183 1.183 34 H 0.144 0.856 35 H 0.140 0.860 36 H 0.123 0.877 37 H 0.124 0.876 38 H 0.236 0.764 39 H 0.097 0.903 40 H 0.117 0.883 41 H 0.152 0.848 42 H 0.155 0.845 43 H 0.157 0.843 44 H 0.150 0.850 45 H 0.114 0.886 46 H 0.095 0.905 47 H 0.142 0.858 48 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 1.263 2.076 -1.367 2.788 hybrid contribution 0.699 -1.316 -0.246 1.510 sum 1.962 0.761 -1.614 2.651 Atomic orbital electron populations 1.86488 1.17082 1.81753 1.49293 1.25051 0.85290 1.10076 0.97512 0.94621 0.80894 0.78339 0.87102 1.20333 0.99200 0.95321 0.97037 1.20954 0.98711 0.93844 0.97369 1.21011 0.97016 0.99987 0.94125 1.19252 0.98251 0.94271 0.94697 1.20692 0.98875 1.03004 0.91770 1.20585 0.87377 0.78578 0.83068 1.90762 1.27630 1.39498 1.81915 1.45699 1.24316 1.55771 1.11124 1.21812 0.91406 0.99286 0.85996 0.87551 1.23439 1.02450 0.94790 0.96669 1.21636 0.99242 0.95952 0.92485 0.88103 1.19661 0.95073 0.95943 0.96500 1.21302 0.95190 0.98854 0.94913 1.21204 1.00278 0.96235 0.95615 1.21075 0.92760 0.95863 0.99759 1.19972 0.98974 0.99972 0.99156 1.18312 0.77839 0.81919 0.76584 1.93177 1.81115 1.91919 1.49574 1.93231 1.40390 1.88812 1.93324 1.93232 1.96216 1.56817 1.69497 1.20782 0.99406 0.95041 0.93185 1.23579 0.97806 0.97888 0.98965 1.20905 0.99904 0.93818 0.97137 1.20941 0.98437 0.99229 0.94690 0.77278 0.86983 1.18001 1.18331 0.85619 0.86023 0.87687 0.87631 0.76394 0.90258 0.88261 0.84824 0.84539 0.84350 0.84960 0.88583 0.90507 0.85789 0.85653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.69 12.77 -35.23 -0.45 -1.14 16 2 C -0.07 -0.04 2.82 36.00 0.10 0.06 16 3 Si 0.69 -0.23 29.79 -169.99 -5.06 -5.30 16 4 C -0.12 -0.14 5.39 -104.62 -0.56 -0.70 16 5 C -0.09 -0.14 9.61 -39.58 -0.38 -0.52 16 6 C -0.10 -0.10 9.70 -39.59 -0.38 -0.48 16 7 C -0.06 -0.02 4.37 -104.62 -0.46 -0.48 16 8 C -0.10 0.25 5.83 -29.03 -0.17 0.08 16 9 C 0.52 -0.12 7.82 -10.99 -0.09 -0.21 16 10 O -0.52 -2.23 15.63 5.55 0.09 -2.14 16 11 N -0.72 2.03 5.27 -53.02 -0.28 1.75 16 12 C 0.12 -0.29 4.32 -67.12 -0.29 -0.58 16 13 H 0.11 -0.05 7.46 -51.93 -0.39 -0.44 16 14 C -0.14 0.51 7.29 -25.92 -0.19 0.32 16 15 C -0.07 0.26 3.86 -90.96 -0.35 -0.09 16 16 H 0.10 -0.43 8.09 -51.93 -0.42 -0.85 16 17 C -0.07 0.14 5.29 -104.62 -0.55 -0.41 16 18 C -0.08 0.19 8.61 -39.58 -0.34 -0.15 16 19 C -0.12 0.22 10.05 -39.58 -0.40 -0.18 16 20 C -0.08 0.06 9.43 -39.58 -0.37 -0.32 16 21 C -0.18 -0.03 5.37 -104.63 -0.56 -0.60 16 22 C 0.51 0.66 3.32 36.00 0.12 0.78 16 23 F -0.18 -0.32 15.97 2.25 0.04 -0.28 16 24 F -0.18 -0.35 17.24 2.25 0.04 -0.31 16 25 F -0.18 -0.37 17.24 2.25 0.04 -0.33 16 26 C -0.07 0.06 9.26 -39.58 -0.37 -0.31 16 27 C -0.14 0.40 7.26 -25.92 -0.19 0.21 16 28 C -0.10 -0.04 9.70 -39.58 -0.38 -0.43 16 29 C -0.12 -0.06 8.67 -39.58 -0.34 -0.41 16 30 H 0.38 -0.85 8.70 45.56 0.40 -0.45 16 31 H 0.11 0.10 7.96 -51.92 -0.41 -0.31 16 32 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 33 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 34 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 35 H 0.12 -0.06 8.06 -52.48 -0.42 -0.48 16 36 H 0.10 -0.45 8.09 -51.93 -0.42 -0.87 16 37 H 0.11 -0.48 8.08 -51.93 -0.42 -0.90 16 38 H 0.40 -2.20 8.70 -40.82 -0.36 -2.56 16 39 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 40 H 0.10 -0.38 7.72 -51.93 -0.40 -0.78 16 41 H 0.13 -0.53 6.66 -52.49 -0.35 -0.88 16 42 H 0.14 -0.52 8.06 -52.49 -0.42 -0.95 16 43 H 0.14 -0.23 7.16 -52.49 -0.38 -0.61 16 44 H 0.13 -0.27 8.05 -52.49 -0.42 -0.69 16 45 H 0.10 -0.30 6.31 -51.93 -0.33 -0.62 16 46 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 47 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 48 H 0.13 -0.15 4.88 -52.49 -0.26 -0.41 16 LS Contribution 412.49 15.07 6.22 6.22 Total: 0.00 -8.88 412.49 -11.42 -20.30 By element: Atomic # 1 Polarization: -8.47 SS G_CDS: -5.89 Total: -14.36 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -6.16 Total: -4.41 kcal Atomic # 7 Polarization: 2.03 SS G_CDS: -0.28 Total: 1.75 kcal Atomic # 8 Polarization: -2.92 SS G_CDS: -0.36 Total: -3.29 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 0.11 Total: -0.93 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.06 Total: -5.30 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -8.88 -11.42 -20.30 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_12335836.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.873 kcal (2) G-P(sol) polarization free energy of solvation -8.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.305 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds