Wall clock time and date at job start Tue Mar 9 2021 13:03:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47522 * 2 1 4 4 C 1.50702 * 109.46636 * 120.00197 * 2 1 3 5 5 C 1.38190 * 119.83999 * 254.97330 * 4 2 1 6 6 C 1.38306 * 120.14723 * 179.69756 * 5 4 2 7 7 F 1.35101 * 120.08852 * 180.32496 * 6 5 4 8 8 C 1.39813 * 119.82694 * 0.57908 * 6 5 4 9 9 C 1.47697 * 120.15255 * 179.72039 * 8 6 5 10 10 O 1.21578 * 119.99917 * 359.72646 * 9 8 6 11 11 N 1.34772 * 120.00111 * 179.72905 * 9 8 6 12 12 C 1.46506 * 120.00033 * 180.02562 * 11 9 8 13 13 H 1.08992 * 112.90684 * 336.24748 * 12 11 9 14 14 C 1.54049 * 113.61276 * 107.61836 * 12 11 9 15 15 C 1.53781 * 87.08031 * 89.07129 * 14 12 11 16 16 H 1.08999 * 113.61181 * 270.87794 * 15 14 12 17 17 C 1.50696 * 113.69134 * 139.98880 * 15 14 12 18 18 C 1.38216 * 119.99821 * 322.18905 * 17 15 14 19 19 C 1.38259 * 119.99653 * 179.74855 * 18 17 15 20 20 C 1.38215 * 120.00051 * 0.52680 * 19 18 17 21 21 C 1.38255 * 120.00049 * 359.74799 * 20 19 18 22 22 C 1.50698 * 120.00174 * 179.97438 * 21 20 19 23 23 F 1.39897 * 109.46906 * 269.98173 * 22 21 20 24 24 F 1.39900 * 109.47022 * 29.97962 * 22 21 20 25 25 F 1.39895 * 109.47461 * 149.97852 * 22 21 20 26 26 C 1.38213 * 119.99894 * 359.97438 * 21 20 19 27 27 C 1.53781 * 87.08070 * 25.42738 * 15 14 12 28 28 C 1.39649 * 119.69109 * 359.44997 * 8 6 5 29 29 C 1.38069 * 119.85006 * 0.26906 * 28 8 6 30 30 F 1.35106 * 119.91279 * 180.02562 * 29 28 8 31 31 H 0.96710 * 113.99477 * 60.00300 * 1 2 3 32 32 H 1.09003 * 109.46900 * 239.99643 * 2 1 3 33 33 H 1.48504 * 109.99893 * 59.99396 * 3 2 1 34 34 H 1.48497 * 109.99963 * 181.31591 * 3 2 1 35 35 H 1.08002 * 119.92755 * 0.02791 * 5 4 2 36 36 H 0.97002 * 120.00078 * 359.97438 * 11 9 8 37 37 H 1.09005 * 113.62125 * 334.52173 * 14 12 11 38 38 H 1.09003 * 113.61268 * 203.61961 * 14 12 11 39 39 H 1.07997 * 119.99950 * 0.02562 * 18 17 15 40 40 H 1.08006 * 120.00118 * 180.29942 * 19 18 17 41 41 H 1.08004 * 119.99821 * 179.77406 * 20 19 18 42 42 H 1.08004 * 119.99793 * 179.97438 * 26 21 20 43 43 H 1.09002 * 113.61445 * 89.11830 * 27 15 14 44 44 H 1.09002 * 113.61408 * 219.93560 * 27 15 14 45 45 H 1.07998 * 120.07109 * 180.25501 * 28 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 2.4534 0.0197 2.2811 6 6 2.9104 -0.6254 3.4160 7 9 3.4146 0.0901 4.4451 8 6 2.8541 -2.0202 3.4932 9 6 3.3458 -2.7169 4.6992 10 8 3.8054 -2.0776 5.6256 11 7 3.2850 -4.0612 4.7727 12 6 3.7722 -4.7522 5.9692 13 1 4.5060 -4.1698 6.5262 14 6 2.6476 -5.3336 6.8469 15 6 2.7541 -6.6121 5.9989 16 1 2.1137 -6.6055 5.1169 17 6 2.6328 -7.8823 6.8006 18 6 3.1993 -7.9621 8.0588 19 6 3.0835 -9.1257 8.7965 20 6 2.4108 -10.2129 8.2713 21 6 1.8490 -10.1350 7.0104 22 6 1.1160 -11.3205 6.4375 23 9 2.0144 -12.1275 5.7313 24 9 0.5420 -12.0605 7.4767 25 9 0.1111 -10.8741 5.5727 26 6 1.9598 -8.9698 6.2753 27 6 4.2078 -6.2038 5.7077 28 6 2.3256 -2.7513 2.4272 29 6 1.8677 -2.0936 1.3029 30 9 1.3557 -2.7996 0.2711 31 1 -0.3933 0.4417 -0.7652 32 1 1.7923 -0.5139 -0.8900 33 1 1.5615 2.4679 1.2085 34 1 3.5347 1.7701 -0.0320 35 1 2.4999 1.0969 2.2181 36 1 2.9180 -4.5713 4.0337 37 1 1.6953 -4.8148 6.7370 38 1 2.9358 -5.4753 7.8886 39 1 3.7284 -7.1140 8.4675 40 1 3.5220 -9.1865 9.7817 41 1 2.3235 -11.1231 8.8461 42 1 1.5213 -8.9091 5.2901 43 1 4.9225 -6.5834 6.4379 44 1 4.5155 -6.3887 4.6785 45 1 2.2753 -3.8287 2.4821 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705318_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:19 Heat of formation + Delta-G solvation = -214.127431 kcal Electronic energy + Delta-G solvation = -38316.315873 eV Core-core repulsion = 32294.663740 eV Total energy + Delta-G solvation = -6021.652133 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.104 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -51.11790 -50.15006 -50.05476 -48.63609 -48.57884 -41.93670 -40.99683 -40.01773 -38.96758 -37.72333 -35.04560 -33.56326 -32.91197 -32.09029 -31.48771 -28.12260 -27.20434 -26.86827 -26.39200 -24.54041 -23.95743 -23.56731 -22.65757 -22.03628 -20.59943 -19.74270 -19.44956 -19.31917 -19.08135 -18.74941 -18.62188 -18.43537 -17.61895 -17.42224 -17.14677 -17.10555 -16.53004 -16.48305 -16.29120 -16.24811 -15.83944 -15.66778 -15.61567 -15.46933 -15.44052 -15.37563 -15.08422 -14.97298 -14.83723 -14.73413 -14.65755 -14.56086 -14.32059 -13.99885 -13.86336 -13.83384 -13.65152 -13.62571 -13.44774 -13.10487 -13.07090 -12.54063 -12.42837 -12.15143 -12.10643 -11.98066 -11.48302 -11.18735 -10.71515 -10.58418 -10.37059 -10.28084 -9.96159 -9.88132 -5.18400 -0.89898 -0.41838 -0.21335 0.07040 0.99971 1.31101 1.47574 1.65794 1.70814 1.74292 2.16560 2.28292 2.65091 2.70618 2.73386 2.92334 2.99294 3.15093 3.21329 3.30705 3.39762 3.44876 3.47983 3.55448 3.60009 3.62904 3.71229 3.84618 3.87980 3.93574 4.04322 4.15259 4.21918 4.22476 4.37516 4.43636 4.45422 4.50651 4.56186 4.61176 4.64075 4.68637 4.73921 4.80075 4.87799 5.02079 5.13624 5.23111 5.27918 5.38632 5.59466 6.16523 6.37931 6.92007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.079 4.079 3 Si 0.693 3.307 4 C -0.053 4.053 5 C -0.140 4.140 6 C 0.162 3.838 7 F -0.104 7.104 8 C -0.142 4.142 9 C 0.565 3.435 10 O -0.510 6.510 11 N -0.707 5.707 12 C 0.120 3.880 13 H 0.111 0.889 14 C -0.143 4.143 15 C -0.076 4.076 16 H 0.101 0.899 17 C -0.072 4.072 18 C -0.085 4.085 19 C -0.115 4.115 20 C -0.074 4.074 21 C -0.179 4.179 22 C 0.508 3.492 23 F -0.176 7.176 24 F -0.176 7.176 25 F -0.177 7.177 26 C -0.067 4.067 27 C -0.135 4.135 28 C -0.092 4.092 29 C 0.113 3.887 30 F -0.119 7.119 31 H 0.389 0.611 32 H 0.085 0.915 33 H -0.244 1.244 34 H -0.248 1.248 35 H 0.152 0.848 36 H 0.401 0.599 37 H 0.078 0.922 38 H 0.099 0.901 39 H 0.134 0.866 40 H 0.137 0.863 41 H 0.136 0.864 42 H 0.135 0.865 43 H 0.102 0.898 44 H 0.080 0.920 45 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.559 1.353 -4.066 4.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.189 4.189 3 Si 0.593 3.407 4 C -0.054 4.054 5 C -0.158 4.158 6 C 0.141 3.859 7 F -0.082 7.082 8 C -0.146 4.146 9 C 0.351 3.649 10 O -0.385 6.385 11 N -0.359 5.359 12 C 0.014 3.986 13 H 0.129 0.871 14 C -0.182 4.182 15 C -0.094 4.094 16 H 0.119 0.881 17 C -0.072 4.072 18 C -0.102 4.102 19 C -0.133 4.133 20 C -0.092 4.092 21 C -0.181 4.181 22 C 0.453 3.547 23 F -0.157 7.157 24 F -0.158 7.158 25 F -0.158 7.158 26 C -0.085 4.085 27 C -0.173 4.173 28 C -0.112 4.112 29 C 0.093 3.907 30 F -0.098 7.098 31 H 0.237 0.763 32 H 0.103 0.897 33 H -0.169 1.169 34 H -0.172 1.172 35 H 0.169 0.831 36 H 0.237 0.763 37 H 0.097 0.903 38 H 0.117 0.883 39 H 0.152 0.848 40 H 0.155 0.845 41 H 0.154 0.846 42 H 0.153 0.847 43 H 0.120 0.880 44 H 0.099 0.901 45 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.463 2.061 -2.417 3.497 hybrid contribution -0.439 -1.246 -0.392 1.378 sum 1.023 0.816 -2.808 3.098 Atomic orbital electron populations 1.86494 1.16133 1.82070 1.50003 1.24678 0.86737 1.11242 0.96264 0.94789 0.81270 0.77198 0.87470 1.19428 0.98346 0.92005 0.95630 1.20908 1.01629 1.01186 0.92080 1.17428 0.95264 0.88028 0.85209 1.91656 1.83542 1.77133 1.55829 1.19830 1.05859 0.92371 0.96541 1.17774 0.78809 0.82272 0.86059 1.90899 1.43972 1.65664 1.37968 1.45515 1.64260 1.06035 1.20070 1.21945 0.97130 0.92996 0.86488 0.87094 1.23640 1.00150 0.95041 0.99362 1.21643 0.98063 0.91192 0.98518 0.88077 1.19639 0.97793 0.94820 0.94954 1.21298 0.97298 0.98069 0.93571 1.21196 0.98971 0.92592 1.00555 1.21009 0.95032 0.99772 0.93387 1.19977 1.05717 0.94376 0.97998 1.18312 0.77343 0.83082 0.75916 1.93241 1.67613 1.75349 1.79517 1.93205 1.85487 1.78923 1.58139 1.93201 1.62393 1.89104 1.71111 1.20844 0.96878 0.91192 0.99609 1.23452 0.96050 0.94133 1.03633 1.21163 0.97627 1.01098 0.91262 1.17167 0.98797 0.88689 0.86035 1.91578 1.84249 1.77938 1.55985 0.76276 0.89740 1.16914 1.17232 0.83064 0.76280 0.90319 0.88311 0.84806 0.84519 0.84580 0.84723 0.87970 0.90142 0.82897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.54 12.86 -35.23 -0.45 0.09 16 2 C -0.08 0.11 2.43 36.01 0.09 0.20 16 3 Si 0.69 -1.76 30.18 -169.99 -5.13 -6.89 16 4 C -0.05 -0.04 5.30 -104.49 -0.55 -0.59 16 5 C -0.14 -0.19 8.62 -39.57 -0.34 -0.53 16 6 C 0.16 0.42 7.28 -38.97 -0.28 0.13 16 7 F -0.10 -0.50 15.55 2.25 0.04 -0.46 16 8 C -0.14 -0.16 5.88 -104.92 -0.62 -0.78 16 9 C 0.56 1.09 7.77 -12.40 -0.10 1.00 16 10 O -0.51 -3.01 14.94 5.30 0.08 -2.93 16 11 N -0.71 1.09 5.22 -53.87 -0.28 0.81 16 12 C 0.12 -0.22 4.34 -66.97 -0.29 -0.51 16 13 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 14 C -0.14 0.35 7.27 -25.78 -0.19 0.16 16 15 C -0.08 0.24 3.85 -90.96 -0.35 -0.11 16 16 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 17 C -0.07 0.12 5.29 -104.63 -0.55 -0.43 16 18 C -0.08 0.18 8.60 -39.58 -0.34 -0.16 16 19 C -0.12 0.20 10.05 -39.58 -0.40 -0.19 16 20 C -0.07 0.04 9.40 -39.58 -0.37 -0.33 16 21 C -0.18 -0.07 5.45 -104.63 -0.57 -0.64 16 22 C 0.51 0.76 3.36 36.00 0.12 0.89 16 23 F -0.18 -0.41 17.30 2.25 0.04 -0.38 16 24 F -0.18 -0.38 16.46 2.25 0.04 -0.34 16 25 F -0.18 -0.36 16.46 2.25 0.04 -0.32 16 26 C -0.07 0.04 9.06 -39.58 -0.36 -0.32 16 27 C -0.13 0.47 7.28 -25.92 -0.19 0.28 16 28 C -0.09 0.09 9.51 -39.12 -0.37 -0.28 16 29 C 0.11 0.05 7.23 -39.49 -0.29 -0.24 16 30 F -0.12 -0.12 16.73 2.25 0.04 -0.08 16 31 H 0.39 -2.35 8.74 45.56 0.40 -1.96 16 32 H 0.08 -0.24 7.89 -51.93 -0.41 -0.65 16 33 H -0.24 -0.06 6.74 56.52 0.38 0.33 16 34 H -0.25 0.03 7.11 56.52 0.40 0.43 16 35 H 0.15 0.10 4.87 -52.49 -0.26 -0.16 16 36 H 0.40 -1.70 6.73 -40.82 -0.27 -1.98 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.10 -0.29 6.33 -51.93 -0.33 -0.62 16 39 H 0.13 -0.52 6.68 -52.49 -0.35 -0.87 16 40 H 0.14 -0.51 8.06 -52.48 -0.42 -0.93 16 41 H 0.14 -0.22 7.60 -52.48 -0.40 -0.62 16 42 H 0.13 -0.23 7.60 -52.48 -0.40 -0.63 16 43 H 0.10 -0.39 7.71 -51.93 -0.40 -0.79 16 44 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 45 H 0.15 -0.67 6.40 -52.49 -0.34 -1.00 16 LS Contribution 398.02 15.07 6.00 6.00 Total: 0.00 -9.31 398.02 -9.60 -18.91 By element: Atomic # 1 Polarization: -7.91 SS G_CDS: -4.05 Total: -11.96 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -5.95 Total: -2.45 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.28 Total: 0.81 kcal Atomic # 8 Polarization: -2.47 SS G_CDS: -0.37 Total: -2.84 kcal Atomic # 9 Polarization: -1.77 SS G_CDS: 0.19 Total: -1.58 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.13 Total: -6.89 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -9.31 -9.60 -18.91 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -195.214 kcal (2) G-P(sol) polarization free energy of solvation -9.310 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -204.524 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.603 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.913 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds