Wall clock time and date at job start Tue Mar 9 2021 13:04:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38974 * 119.95353 * 2 1 4 4 O 1.35710 * 119.91559 * 359.97438 * 3 2 1 5 5 C 1.39028 * 120.17121 * 179.76739 * 3 2 1 6 6 C 1.50699 * 119.95169 * 180.27834 * 5 3 2 7 7 O 1.42898 * 109.47013 * 285.22787 * 6 5 3 8 8 Si 1.86306 * 109.46704 * 165.23178 * 6 5 3 9 9 C 1.37674 * 120.08728 * 0.51049 * 5 3 2 10 10 C 1.39750 * 119.91560 * 359.74616 * 9 5 3 11 11 C 1.47609 * 120.09182 * 179.97438 * 10 9 5 12 12 O 1.21584 * 119.99654 * 0.02562 * 11 10 9 13 13 N 1.34770 * 120.00032 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99769 * 179.97438 * 13 11 10 15 15 H 1.08995 * 112.85131 * 23.80485 * 14 13 11 16 16 C 1.53785 * 113.61422 * 154.99917 * 14 13 11 17 17 C 1.53783 * 87.07983 * 89.11618 * 16 14 13 18 18 H 1.08995 * 113.61558 * 270.88318 * 17 16 14 19 19 C 1.50701 * 113.61197 * 139.98256 * 17 16 14 20 20 C 1.38216 * 119.99768 * 119.72715 * 19 17 16 21 21 C 1.38263 * 119.99832 * 179.74450 * 20 19 17 22 22 C 1.50699 * 120.00204 * 180.27465 * 21 20 19 23 23 F 1.39895 * 109.46986 * 180.27112 * 22 21 20 24 24 F 1.39894 * 109.47200 * 300.27483 * 22 21 20 25 25 F 1.39901 * 109.46975 * 60.27795 * 22 21 20 26 26 C 1.38218 * 119.99494 * 0.54887 * 21 20 19 27 27 C 1.38259 * 120.00354 * 359.70649 * 26 21 20 28 28 C 1.38210 * 119.99561 * 0.02562 * 27 26 21 29 29 C 1.53776 * 87.08116 * 25.43340 * 17 16 14 30 30 C 1.37727 * 119.95432 * 180.27928 * 2 1 3 31 31 H 1.09002 * 109.47152 * 269.72335 * 1 2 3 32 32 H 1.09001 * 109.46980 * 149.72436 * 1 2 3 33 33 H 1.09004 * 109.47113 * 29.72417 * 1 2 3 34 34 H 0.96699 * 113.99502 * 90.00322 * 4 3 2 35 35 H 1.08996 * 109.47399 * 45.23168 * 6 5 3 36 36 H 0.96697 * 114.00420 * 300.00020 * 7 6 5 37 37 H 1.48497 * 110.00096 * 58.68157 * 8 6 5 38 38 H 1.48500 * 109.99526 * 179.97438 * 8 6 5 39 39 H 1.08012 * 120.04233 * 179.76737 * 9 5 3 40 40 H 0.97001 * 119.99930 * 359.97438 * 13 11 10 41 41 H 1.09003 * 113.61761 * 203.66659 * 16 14 13 42 42 H 1.09000 * 113.61342 * 334.48683 * 16 14 13 43 43 H 1.07999 * 120.00341 * 359.97438 * 20 19 17 44 44 H 1.07999 * 119.99794 * 179.72868 * 26 21 20 45 45 H 1.07996 * 120.00160 * 180.02562 * 27 26 21 46 46 H 1.08004 * 119.99446 * 179.97438 * 28 27 26 47 47 H 1.08997 * 113.61333 * 220.01620 * 29 17 16 48 48 H 1.09003 * 113.61280 * 89.11172 * 29 17 16 49 49 H 1.08000 * 120.04574 * 359.97438 * 30 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5912 1.2094 0.0049 6 6 4.3386 2.5180 0.0112 7 8 4.2721 3.1108 -1.2873 8 14 6.1199 2.2134 0.4643 9 6 4.2859 0.0208 -0.0009 10 6 3.5919 -1.1921 -0.0063 11 6 4.3328 -2.4688 -0.0130 12 8 5.5486 -2.4659 -0.0134 13 7 3.6616 -3.6374 -0.0188 14 6 4.3970 -4.9044 -0.0260 15 1 5.4046 -4.8113 0.3791 16 6 3.6023 -6.0814 0.5638 17 6 3.0621 -6.3254 -0.8552 18 1 2.1500 -5.7713 -1.0765 19 6 2.9659 -7.7840 -1.2219 20 6 1.7414 -8.3346 -1.5505 21 6 1.6539 -9.6715 -1.8921 22 6 0.3199 -10.2704 -2.2564 23 9 0.4839 -11.6272 -2.5553 24 9 -0.5625 -10.1334 -1.1795 25 9 -0.2000 -9.6066 -3.3727 26 6 2.7892 -10.4599 -1.8939 27 6 4.0131 -9.9104 -1.5601 28 6 4.1014 -8.5726 -1.2240 29 6 4.3388 -5.6428 -1.3737 30 6 2.1947 -1.1933 -0.0058 31 1 -0.3633 -0.0050 1.0277 32 1 -0.3633 -0.8875 -0.5181 33 1 -0.3633 0.8925 -0.5096 34 1 1.3220 2.7182 0.8827 35 1 3.8879 3.1904 0.7411 36 1 4.6558 2.5664 -1.9884 37 1 6.7370 1.2730 -0.5052 38 1 6.8679 3.4962 0.4735 39 1 5.3660 0.0258 -0.0009 40 1 2.6916 -3.6396 -0.0181 41 1 4.2312 -6.8899 0.9367 42 1 2.8366 -5.7772 1.2775 43 1 0.8536 -7.7197 -1.5441 44 1 2.7202 -11.5052 -2.1565 45 1 4.9002 -10.5263 -1.5619 46 1 5.0574 -8.1435 -0.9629 47 1 4.1668 -4.9845 -2.2252 48 1 5.1691 -6.3313 -1.5305 49 1 1.6547 -2.1286 -0.0100 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:23 Heat of formation + Delta-G solvation = -176.069324 kcal Electronic energy + Delta-G solvation = -37709.820780 eV Core-core repulsion = 32154.507111 eV Total energy + Delta-G solvation = -5555.313669 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.138 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -51.23359 -48.76293 -48.70302 -41.92198 -41.28553 -40.31785 -38.94759 -37.98220 -37.47926 -34.87470 -33.97981 -32.89250 -32.35704 -31.36919 -27.98699 -27.16539 -27.02847 -26.64120 -26.38886 -24.71052 -23.45672 -22.58903 -22.04717 -21.62297 -20.41763 -19.59259 -19.55918 -19.43574 -19.04590 -18.78994 -18.13863 -17.34936 -17.29127 -16.89955 -16.65994 -16.32837 -16.17890 -16.03630 -15.93232 -15.74053 -15.62739 -15.52007 -15.27116 -15.14853 -14.98984 -14.86892 -14.78673 -14.75764 -14.49817 -14.35031 -14.22382 -14.06110 -13.86904 -13.77838 -13.44497 -13.28573 -13.25330 -12.92483 -12.88855 -12.77751 -12.46423 -12.38906 -11.92834 -11.87710 -11.76500 -11.63524 -11.25229 -11.12832 -10.62567 -10.24037 -10.17000 -9.97428 -9.79814 -9.63854 -5.01930 -0.39107 -0.08564 0.07398 0.23195 1.20359 1.52306 1.60403 1.61200 1.85941 1.99082 2.43076 2.56195 2.67772 2.95677 3.12831 3.30717 3.35317 3.44078 3.51836 3.55432 3.64627 3.70781 3.73264 3.84474 3.94716 4.02351 4.08124 4.10422 4.17412 4.24615 4.36612 4.39746 4.47262 4.62308 4.64610 4.67056 4.73853 4.78544 4.83144 4.85901 4.90343 4.95902 5.03607 5.05140 5.08485 5.14364 5.18092 5.21959 5.32351 5.33599 5.42989 5.59276 5.63159 5.78390 6.39504 6.42792 6.77158 7.10611 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.120 4.120 3 C 0.159 3.841 4 O -0.496 6.496 5 C -0.153 4.153 6 C -0.062 4.062 7 O -0.541 6.541 8 Si 0.750 3.250 9 C -0.065 4.065 10 C -0.151 4.151 11 C 0.562 3.438 12 O -0.576 6.576 13 N -0.694 5.694 14 C 0.113 3.887 15 H 0.091 0.909 16 C -0.122 4.122 17 C -0.068 4.068 18 H 0.113 0.887 19 C -0.072 4.072 20 C -0.075 4.075 21 C -0.195 4.195 22 C 0.506 3.494 23 F -0.182 7.182 24 F -0.182 7.182 25 F -0.183 7.183 26 C -0.088 4.088 27 C -0.118 4.118 28 C -0.086 4.086 29 C -0.143 4.143 30 C -0.053 4.053 31 H 0.088 0.912 32 H 0.083 0.917 33 H 0.067 0.933 34 H 0.413 0.587 35 H 0.133 0.867 36 H 0.382 0.618 37 H -0.295 1.295 38 H -0.293 1.293 39 H 0.132 0.868 40 H 0.415 0.585 41 H 0.106 0.894 42 H 0.091 0.909 43 H 0.141 0.859 44 H 0.142 0.858 45 H 0.155 0.845 46 H 0.152 0.848 47 H 0.066 0.934 48 H 0.103 0.897 49 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.508 -1.725 5.067 5.911 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.121 4.121 3 C 0.113 3.887 4 O -0.310 6.310 5 C -0.154 4.154 6 C -0.172 4.172 7 O -0.348 6.348 8 Si 0.657 3.343 9 C -0.084 4.084 10 C -0.154 4.154 11 C 0.351 3.649 12 O -0.457 6.457 13 N -0.345 5.345 14 C 0.008 3.992 15 H 0.109 0.891 16 C -0.160 4.160 17 C -0.086 4.086 18 H 0.131 0.869 19 C -0.072 4.072 20 C -0.093 4.093 21 C -0.196 4.196 22 C 0.452 3.548 23 F -0.163 7.163 24 F -0.163 7.163 25 F -0.165 7.165 26 C -0.106 4.106 27 C -0.136 4.136 28 C -0.103 4.103 29 C -0.182 4.182 30 C -0.072 4.072 31 H 0.106 0.894 32 H 0.102 0.898 33 H 0.086 0.914 34 H 0.274 0.726 35 H 0.150 0.850 36 H 0.231 0.769 37 H -0.222 1.222 38 H -0.220 1.220 39 H 0.149 0.851 40 H 0.253 0.747 41 H 0.125 0.875 42 H 0.109 0.891 43 H 0.159 0.841 44 H 0.159 0.841 45 H 0.173 0.827 46 H 0.170 0.830 47 H 0.085 0.915 48 H 0.121 0.879 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.146 -1.269 4.561 4.871 hybrid contribution -0.756 -0.149 -1.124 1.362 sum -1.902 -1.418 3.437 4.176 Atomic orbital electron populations 1.20771 0.88310 1.03994 1.03807 1.20449 0.98288 0.91760 1.01610 1.18449 0.88640 0.85914 0.95666 1.84738 1.75439 1.35635 1.35231 1.20513 0.94175 0.95401 1.05354 1.24909 1.10022 0.93934 0.88325 1.86614 1.82911 1.48148 1.17151 0.94198 0.73165 0.77218 0.89709 1.21113 1.00402 0.91022 0.95841 1.19781 0.94331 0.92553 1.08726 1.18347 0.86749 0.84493 0.75296 1.90794 1.15255 1.88059 1.51568 1.45455 1.10795 1.04263 1.74031 1.21910 0.97057 0.82545 0.97715 0.89074 1.23399 1.00007 0.96871 0.95748 1.21639 0.99425 0.90510 0.97022 0.86888 1.19798 0.92250 0.96225 0.98969 1.20955 0.99304 0.92753 0.96311 1.20005 0.91813 0.97020 1.10750 1.18511 0.86108 0.75778 0.74387 1.93159 1.95584 1.34242 1.93355 1.93210 1.71783 1.95539 1.55806 1.93211 1.88595 1.80637 1.54032 1.21243 0.91815 1.00603 0.96987 1.21467 0.97685 0.95874 0.98558 1.21582 0.99348 0.93519 0.95899 1.23592 0.98153 0.99173 0.97244 1.21365 0.91612 0.99049 0.95154 0.89350 0.89794 0.91380 0.72626 0.84957 0.76883 1.22212 1.22049 0.85084 0.74650 0.87524 0.89086 0.84137 0.84054 0.82702 0.83015 0.91507 0.87892 0.81955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.84 9.79 71.24 0.70 1.53 16 2 C -0.12 0.45 5.89 -19.81 -0.12 0.33 16 3 C 0.16 -0.13 6.66 22.64 0.15 0.02 16 4 O -0.50 0.86 11.84 -90.31 -1.07 -0.21 16 5 C -0.15 -0.10 5.27 -19.81 -0.10 -0.20 16 6 C -0.06 -0.04 2.37 71.24 0.17 0.13 16 7 O -0.54 -2.64 12.88 -148.98 -1.92 -4.56 16 8 Si 0.75 1.04 30.24 68.60 2.07 3.11 16 9 C -0.07 -0.16 8.20 22.50 0.18 0.02 16 10 C -0.15 -0.06 5.88 -20.08 -0.12 -0.18 16 11 C 0.56 1.62 7.76 86.72 0.67 2.29 16 12 O -0.58 -6.69 15.94 -3.98 -0.06 -6.76 16 13 N -0.69 3.16 5.21 -443.14 -2.31 0.85 16 14 C 0.11 -0.54 4.32 45.52 0.20 -0.34 16 15 H 0.09 -0.04 7.46 -2.39 -0.02 -0.06 16 16 C -0.12 1.12 7.29 31.12 0.23 1.35 16 17 C -0.07 0.56 3.86 -11.01 -0.04 0.52 16 18 H 0.11 -1.20 8.10 -2.39 -0.02 -1.22 16 19 C -0.07 0.37 5.29 -19.87 -0.11 0.26 16 20 C -0.08 0.17 9.26 22.27 0.21 0.38 16 21 C -0.19 -0.09 5.37 -19.86 -0.11 -0.19 16 22 C 0.51 1.60 3.32 71.24 0.24 1.83 16 23 F -0.18 -0.79 15.97 44.97 0.72 -0.07 16 24 F -0.18 -0.80 17.23 44.97 0.77 -0.02 16 25 F -0.18 -0.89 17.24 44.97 0.78 -0.11 16 26 C -0.09 0.14 9.43 22.27 0.21 0.35 16 27 C -0.12 0.56 10.05 22.27 0.22 0.79 16 28 C -0.09 0.51 8.61 22.27 0.19 0.70 16 29 C -0.14 0.84 7.25 31.12 0.23 1.07 16 30 C -0.05 0.27 9.18 22.51 0.21 0.48 16 31 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 32 H 0.08 -0.82 8.08 -2.39 -0.02 -0.84 16 33 H 0.07 -0.32 7.51 -2.38 -0.02 -0.34 16 34 H 0.41 -4.55 9.06 -74.06 -0.67 -5.22 16 35 H 0.13 -0.38 7.83 -2.39 -0.02 -0.40 16 36 H 0.38 0.12 8.70 -74.06 -0.64 -0.52 16 37 H -0.29 -2.27 6.68 99.48 0.66 -1.61 16 38 H -0.29 -2.28 7.11 99.48 0.71 -1.57 16 39 H 0.13 0.65 4.43 -2.90 -0.01 0.63 16 40 H 0.41 -4.49 6.72 -92.71 -0.62 -5.11 16 41 H 0.11 -1.04 7.72 -2.39 -0.02 -1.06 16 42 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 43 H 0.14 -0.68 8.06 -2.91 -0.02 -0.70 16 44 H 0.14 -0.43 7.16 -2.91 -0.02 -0.45 16 45 H 0.16 -1.40 8.06 -2.91 -0.02 -1.42 16 46 H 0.15 -1.50 6.66 -2.91 -0.02 -1.52 16 47 H 0.07 -0.22 8.14 -2.39 -0.02 -0.23 16 48 H 0.10 -0.72 6.31 -2.39 -0.02 -0.74 16 49 H 0.16 -1.99 6.39 -2.91 -0.02 -2.00 16 Total: 0.00 -24.24 418.08 1.32 -22.92 By element: Atomic # 1 Polarization: -25.41 SS G_CDS: -0.87 Total: -26.28 kcal Atomic # 6 Polarization: 7.92 SS G_CDS: 3.21 Total: 11.12 kcal Atomic # 7 Polarization: 3.16 SS G_CDS: -2.31 Total: 0.85 kcal Atomic # 8 Polarization: -8.47 SS G_CDS: -3.05 Total: -11.53 kcal Atomic # 9 Polarization: -2.47 SS G_CDS: 2.27 Total: -0.21 kcal Atomic # 14 Polarization: 1.04 SS G_CDS: 2.07 Total: 3.11 kcal Total: -24.24 1.32 -22.92 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -153.150 kcal (2) G-P(sol) polarization free energy of solvation -24.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -177.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.317 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.920 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.069 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds