Wall clock time and date at job start Tue Mar 9 2021 13:04:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.46807 * 2 1 4 4 C 1.50695 * 109.47223 * 119.99842 * 2 1 3 5 5 C 1.38055 * 119.80382 * 65.00422 * 4 2 1 6 6 C 1.38707 * 120.08691 * 179.97438 * 5 4 2 7 7 O 1.35652 * 120.15364 * 179.97438 * 6 5 4 8 8 C 1.40140 * 119.69843 * 0.02562 * 6 5 4 9 9 C 1.47533 * 120.18947 * 180.02562 * 8 6 5 10 10 O 1.21584 * 120.00461 * 359.95470 * 9 8 6 11 11 N 1.34780 * 119.99713 * 179.97438 * 9 8 6 12 12 C 1.46497 * 119.99997 * 179.97438 * 11 9 8 13 13 H 1.08998 * 112.85112 * 336.19541 * 12 11 9 14 14 C 1.53784 * 113.61487 * 107.50341 * 12 11 9 15 15 C 1.53779 * 87.08038 * 89.11397 * 14 12 11 16 16 H 1.09001 * 113.69284 * 270.87266 * 15 14 12 17 17 C 1.50708 * 113.60968 * 139.98108 * 15 14 12 18 18 C 1.38208 * 120.00210 * 322.23068 * 17 15 14 19 19 C 1.38260 * 120.00172 * 179.74673 * 18 17 15 20 20 C 1.38217 * 119.99576 * 0.54686 * 19 18 17 21 21 C 1.38259 * 119.99786 * 359.70562 * 20 19 18 22 22 C 1.50707 * 119.99676 * 179.97438 * 21 20 19 23 23 F 1.39894 * 109.47110 * 270.02439 * 22 21 20 24 24 F 1.39902 * 109.46868 * 30.02723 * 22 21 20 25 25 F 1.39902 * 109.46513 * 150.02296 * 22 21 20 26 26 C 1.38214 * 120.00388 * 0.02562 * 21 20 19 27 27 C 1.53780 * 87.08160 * 25.43426 * 15 14 12 28 28 C 1.39702 * 119.61469 * 359.95597 * 8 6 5 29 29 C 1.37790 * 119.91009 * 0.02562 * 28 8 6 30 30 H 0.96696 * 114.00161 * 59.99991 * 1 2 3 31 31 H 1.09000 * 109.46874 * 240.00627 * 2 1 3 32 32 H 1.48500 * 109.99957 * 60.00161 * 3 2 1 33 33 H 1.48498 * 109.99963 * 181.31809 * 3 2 1 34 34 H 1.08010 * 119.95766 * 359.72080 * 5 4 2 35 35 H 0.96701 * 113.99411 * 89.99869 * 7 6 5 36 36 H 0.97003 * 120.00284 * 0.02562 * 11 9 8 37 37 H 1.08993 * 113.61886 * 203.66846 * 14 12 11 38 38 H 1.09006 * 113.61046 * 334.56917 * 14 12 11 39 39 H 1.07997 * 119.99902 * 359.97438 * 18 17 15 40 40 H 1.07996 * 120.00518 * 180.27627 * 19 18 17 41 41 H 1.07996 * 119.99748 * 179.72615 * 20 19 18 42 42 H 1.07998 * 119.99612 * 179.97438 * 26 21 20 43 43 H 1.09004 * 113.61462 * 220.01517 * 27 15 14 44 44 H 1.09005 * 113.61221 * 89.11230 * 27 15 14 45 45 H 1.08000 * 120.04491 * 180.02562 * 28 8 6 46 46 H 1.08002 * 119.84771 * 180.02562 * 29 28 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.6829 -2.0585 1.3940 6 6 2.1430 -2.7183 2.5240 7 8 1.8991 -4.0428 2.6863 8 6 2.8600 -2.0101 3.4978 9 6 3.3549 -2.7012 4.7036 10 8 3.1404 -3.8883 4.8552 11 7 4.0445 -2.0164 5.6375 12 6 4.5355 -2.7025 6.8351 13 1 3.9659 -3.6012 7.0716 14 6 6.0584 -2.9166 6.8418 15 6 6.1698 -1.5406 7.5193 16 1 6.2515 -0.7116 6.8164 17 6 7.2080 -1.4873 8.6104 18 6 7.3885 -2.5731 9.4463 19 6 8.3446 -2.5262 10.4439 20 6 9.1122 -1.3892 10.6124 21 6 8.9281 -0.3011 9.7795 22 6 9.7646 0.9389 9.9636 23 9 9.1225 1.8068 10.8532 24 9 11.0161 0.5847 10.4791 25 9 9.9319 1.5759 8.7294 26 6 7.9761 -0.3501 8.7787 27 6 4.7407 -1.7686 8.0395 28 6 3.1047 -0.6463 3.3193 29 6 2.6405 -0.0069 2.1905 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5137 -0.8900 32 1 1.5614 2.4679 1.2085 33 1 3.5345 1.7704 -0.0321 34 1 1.1259 -2.5992 0.6430 35 1 2.5830 -4.6169 2.3151 36 1 4.2152 -1.0692 5.5169 37 1 6.3805 -3.7427 7.4755 38 1 6.4990 -2.9495 5.8453 39 1 6.7851 -3.4595 9.3179 40 1 8.4887 -3.3762 11.0942 41 1 9.8560 -1.3509 11.3945 42 1 7.8320 0.5001 8.1284 43 1 4.1175 -0.8747 8.0101 44 1 4.7026 -2.2810 9.0009 45 1 3.6569 -0.0938 4.0652 46 1 2.8306 1.0474 2.0533 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705318_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:46 Heat of formation + Delta-G solvation = -169.653307 kcal Electronic energy + Delta-G solvation = -35438.095355 eV Core-core repulsion = 30038.597524 eV Total energy + Delta-G solvation = -5399.497831 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.122 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -51.12267 -48.64188 -48.58398 -41.97300 -41.27925 -40.07690 -38.92234 -38.27125 -37.26316 -34.81727 -33.20384 -32.82549 -31.93735 -31.19652 -27.79949 -27.19672 -26.84351 -26.27822 -23.98555 -23.68554 -23.55635 -22.59428 -21.75598 -20.52604 -19.45569 -19.40229 -19.27475 -19.09852 -18.75537 -18.49471 -17.64115 -17.48641 -16.94407 -16.73203 -16.47253 -16.37940 -16.06001 -15.81285 -15.64528 -15.46752 -15.44414 -15.20839 -15.07390 -14.95233 -14.88879 -14.74057 -14.68341 -14.57079 -14.31611 -14.26512 -14.00042 -13.84471 -13.62961 -13.48513 -13.28411 -13.09369 -13.06299 -12.51953 -12.44451 -12.15428 -12.08661 -11.93598 -11.80328 -11.42891 -10.84727 -10.53242 -10.35649 -10.22679 -10.09617 -9.95038 -9.84413 -5.09698 -0.47430 -0.20986 0.03644 0.07484 1.11654 1.50100 1.65405 1.69518 1.82026 1.93314 2.28650 2.49697 2.70235 2.99063 2.99331 3.21511 3.23775 3.40821 3.45085 3.47596 3.52712 3.58576 3.64264 3.65340 3.74416 3.85461 3.89848 3.95429 4.04965 4.13041 4.16248 4.22970 4.44257 4.47632 4.48888 4.53369 4.62356 4.66807 4.70990 4.76226 4.82556 4.86952 4.91785 5.02369 5.06076 5.14300 5.14455 5.28674 5.44758 5.47202 5.59925 6.35523 6.47356 6.66008 7.14208 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.079 4.079 3 Si 0.687 3.313 4 C -0.030 4.030 5 C -0.126 4.126 6 C 0.176 3.824 7 O -0.474 6.474 8 C -0.166 4.166 9 C 0.564 3.436 10 O -0.514 6.514 11 N -0.713 5.713 12 C 0.121 3.879 13 H 0.109 0.891 14 C -0.143 4.143 15 C -0.076 4.076 16 H 0.100 0.900 17 C -0.072 4.072 18 C -0.085 4.085 19 C -0.115 4.115 20 C -0.074 4.074 21 C -0.180 4.180 22 C 0.508 3.492 23 F -0.176 7.176 24 F -0.176 7.176 25 F -0.177 7.177 26 C -0.068 4.068 27 C -0.136 4.136 28 C -0.063 4.063 29 C -0.142 4.142 30 H 0.385 0.615 31 H 0.080 0.920 32 H -0.248 1.248 33 H -0.253 1.253 34 H 0.143 0.857 35 H 0.398 0.602 36 H 0.399 0.601 37 H 0.097 0.903 38 H 0.077 0.923 39 H 0.134 0.866 40 H 0.137 0.863 41 H 0.136 0.864 42 H 0.134 0.866 43 H 0.079 0.921 44 H 0.101 0.899 45 H 0.133 0.867 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.176 1.864 -4.147 4.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.189 4.189 3 Si 0.588 3.412 4 C -0.031 4.031 5 C -0.144 4.144 6 C 0.129 3.871 7 O -0.285 6.285 8 C -0.169 4.169 9 C 0.351 3.649 10 O -0.389 6.389 11 N -0.365 5.365 12 C 0.016 3.984 13 H 0.127 0.873 14 C -0.182 4.182 15 C -0.094 4.094 16 H 0.118 0.882 17 C -0.072 4.072 18 C -0.102 4.102 19 C -0.133 4.133 20 C -0.092 4.092 21 C -0.181 4.181 22 C 0.453 3.547 23 F -0.157 7.157 24 F -0.157 7.157 25 F -0.158 7.158 26 C -0.086 4.086 27 C -0.174 4.174 28 C -0.082 4.082 29 C -0.159 4.159 30 H 0.233 0.767 31 H 0.098 0.902 32 H -0.173 1.173 33 H -0.177 1.177 34 H 0.161 0.839 35 H 0.257 0.743 36 H 0.235 0.765 37 H 0.116 0.884 38 H 0.095 0.905 39 H 0.152 0.848 40 H 0.155 0.845 41 H 0.154 0.846 42 H 0.152 0.848 43 H 0.098 0.902 44 H 0.119 0.881 45 H 0.151 0.849 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 0.111 1.483 -2.763 3.138 hybrid contribution 0.823 0.138 -0.027 0.835 sum 0.935 1.622 -2.790 3.360 Atomic orbital electron populations 1.86505 1.16708 1.81907 1.49854 1.24778 0.86202 1.10772 0.97166 0.95054 0.80799 0.77784 0.87573 1.19430 0.95721 0.93427 0.94496 1.21344 1.00967 0.94450 0.97678 1.18475 0.92220 0.85279 0.91091 1.84772 1.49334 1.12421 1.82024 1.20378 1.04200 0.94837 0.97518 1.17996 0.77662 0.86706 0.82526 1.90836 1.56145 1.14617 1.77312 1.45587 1.56815 1.13010 1.21107 1.21838 0.95031 0.97015 0.84538 0.87309 1.23585 0.96175 0.96547 1.01856 1.21642 0.93027 0.99274 0.95441 0.88170 1.19658 0.96954 0.93453 0.97095 1.21299 0.96944 0.98209 0.93781 1.21196 0.95637 0.97997 0.98471 1.21006 0.98633 0.91981 0.97613 1.19979 1.01481 0.94506 1.02121 1.18317 0.78396 0.83954 0.73985 1.93240 1.81484 1.72013 1.68977 1.93205 1.43589 1.91825 1.87130 1.93200 1.95622 1.83793 1.43227 1.20839 0.93329 0.98493 0.95916 1.23455 0.95144 1.00440 0.98343 1.21077 0.97426 0.92743 0.96947 1.20829 1.01041 0.99460 0.94594 0.76667 0.90244 1.17311 1.17739 0.83946 0.74313 0.76531 0.88435 0.90462 0.84796 0.84512 0.84582 0.84772 0.90236 0.88080 0.84903 0.85499 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.35 12.81 -35.23 -0.45 -0.10 16 2 C -0.08 0.10 2.78 36.00 0.10 0.20 16 3 Si 0.69 -1.66 29.83 -169.99 -5.07 -6.74 16 4 C -0.03 -0.03 5.39 -104.58 -0.56 -0.60 16 5 C -0.13 -0.20 9.60 -39.48 -0.38 -0.58 16 6 C 0.18 0.45 6.72 -38.69 -0.26 0.19 16 7 O -0.47 -1.43 11.58 -40.54 -0.47 -1.90 16 8 C -0.17 -0.31 5.89 -104.85 -0.62 -0.93 16 9 C 0.56 1.44 7.76 -12.47 -0.10 1.35 16 10 O -0.51 -3.07 14.76 -16.59 -0.24 -3.31 16 11 N -0.71 0.50 5.21 -54.06 -0.28 0.22 16 12 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 13 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 14 C -0.14 0.30 7.25 -25.92 -0.19 0.11 16 15 C -0.08 0.20 3.86 -90.96 -0.35 -0.15 16 16 H 0.10 -0.35 8.09 -51.93 -0.42 -0.77 16 17 C -0.07 0.10 5.29 -104.62 -0.55 -0.45 16 18 C -0.08 0.16 8.60 -39.58 -0.34 -0.18 16 19 C -0.12 0.18 10.05 -39.58 -0.40 -0.21 16 20 C -0.07 0.03 9.40 -39.58 -0.37 -0.34 16 21 C -0.18 -0.10 5.45 -104.62 -0.57 -0.67 16 22 C 0.51 0.82 3.36 36.01 0.12 0.94 16 23 F -0.18 -0.44 17.30 2.25 0.04 -0.40 16 24 F -0.18 -0.39 16.46 2.25 0.04 -0.35 16 25 F -0.18 -0.37 16.46 2.25 0.04 -0.33 16 26 C -0.07 0.03 9.06 -39.58 -0.36 -0.33 16 27 C -0.14 0.38 7.29 -25.92 -0.19 0.19 16 28 C -0.06 0.01 9.54 -39.20 -0.37 -0.37 16 29 C -0.14 -0.08 8.64 -39.63 -0.34 -0.43 16 30 H 0.39 -2.20 8.74 45.56 0.40 -1.81 16 31 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 32 H -0.25 -0.15 7.04 56.52 0.40 0.25 16 33 H -0.25 0.06 7.11 56.52 0.40 0.46 16 34 H 0.14 0.09 8.06 -52.48 -0.42 -0.33 16 35 H 0.40 -0.40 9.06 45.56 0.41 0.01 16 36 H 0.40 -1.25 6.73 -40.82 -0.27 -1.52 16 37 H 0.10 -0.26 6.32 -51.93 -0.33 -0.59 16 38 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.13 -0.48 6.68 -52.49 -0.35 -0.83 16 40 H 0.14 -0.49 8.06 -52.49 -0.42 -0.91 16 41 H 0.14 -0.20 7.60 -52.49 -0.40 -0.60 16 42 H 0.13 -0.20 7.60 -52.49 -0.40 -0.60 16 43 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 44 H 0.10 -0.31 7.71 -51.93 -0.40 -0.72 16 45 H 0.13 -0.44 6.40 -52.49 -0.34 -0.77 16 46 H 0.13 -0.05 4.83 -52.49 -0.25 -0.30 16 LS Contribution 396.43 15.07 5.97 5.97 Total: 0.00 -10.32 396.43 -10.50 -20.81 By element: Atomic # 1 Polarization: -7.15 SS G_CDS: -4.04 Total: -11.19 kcal Atomic # 6 Polarization: 3.34 SS G_CDS: -6.02 Total: -2.69 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.28 Total: 0.22 kcal Atomic # 8 Polarization: -4.14 SS G_CDS: -1.17 Total: -5.31 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.11 Total: -1.08 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.07 Total: -6.74 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -10.32 -10.50 -20.81 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.842 kcal (2) G-P(sol) polarization free energy of solvation -10.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.812 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds