Wall clock time and date at job start Tue Mar 9 2021 13:05:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.47498 * 2 1 4 4 C 1.50698 * 109.46844 * 120.00004 * 2 1 3 5 5 C 1.34185 * 125.44070 * 65.31741 * 4 2 1 6 6 C 1.47018 * 105.95460 * 180.12647 * 5 4 2 7 7 C 1.47382 * 127.18887 * 179.89289 * 6 5 4 8 8 O 1.21607 * 119.99925 * 359.70292 * 7 6 5 9 9 N 1.34779 * 119.99407 * 179.70653 * 7 6 5 10 10 C 1.46496 * 119.99390 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.91246 * 23.74616 * 10 9 7 12 12 C 1.53786 * 113.61518 * 154.99856 * 10 9 7 13 13 C 1.53781 * 87.17350 * 89.15486 * 12 10 9 14 14 H 1.08997 * 113.61223 * 270.84552 * 13 12 10 15 15 C 1.50703 * 113.61417 * 139.93966 * 13 12 10 16 16 C 1.38214 * 119.99914 * 300.00056 * 15 13 12 17 17 C 1.38256 * 119.99597 * 179.97438 * 16 15 13 18 18 C 1.38212 * 120.00013 * 0.02562 * 17 16 15 19 19 C 1.38256 * 120.00145 * 359.97438 * 18 17 16 20 20 C 1.50699 * 119.99603 * 179.97438 * 19 18 17 21 21 F 1.39901 * 109.47489 * 359.97438 * 20 19 18 22 22 F 1.39895 * 109.47284 * 120.00055 * 20 19 18 23 23 F 1.39903 * 109.47004 * 239.99862 * 20 19 18 24 24 C 1.38207 * 120.00022 * 359.74646 * 19 18 17 25 25 C 1.53782 * 87.08260 * 25.39213 * 13 12 10 26 26 C 1.36415 * 105.61412 * 359.62508 * 6 5 4 27 27 O 1.33644 * 108.39952 * 0.22778 * 26 6 5 28 28 H 0.96697 * 114.00191 * 300.00650 * 1 2 3 29 29 H 1.08997 * 109.47252 * 239.99932 * 2 1 3 30 30 H 1.48497 * 109.99970 * 178.68109 * 3 2 1 31 31 H 1.48503 * 109.99768 * 300.00108 * 3 2 1 32 32 H 1.07999 * 127.01727 * 0.02562 * 5 4 2 33 33 H 0.97001 * 120.00492 * 359.97438 * 9 7 6 34 34 H 1.09002 * 113.61357 * 334.56403 * 12 10 9 35 35 H 1.09002 * 113.61608 * 203.74565 * 12 10 9 36 36 H 1.08001 * 120.00000 * 0.02562 * 16 15 13 37 37 H 1.07997 * 119.99531 * 180.02562 * 17 16 15 38 38 H 1.08004 * 119.99853 * 179.97438 * 18 17 16 39 39 H 1.08000 * 120.00257 * 180.28227 * 24 19 18 40 40 H 1.08997 * 113.61668 * 89.11298 * 25 13 12 41 41 H 1.08998 * 113.61674 * 219.93807 * 25 13 12 42 42 H 1.08005 * 125.79865 * 180.23263 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.7601 -2.0135 1.5009 6 6 2.4125 -2.2462 2.7977 7 6 2.5012 -3.5195 3.5345 8 8 1.9947 -4.5248 3.0745 9 7 3.1437 -3.5696 4.7183 10 6 3.2324 -4.8354 5.4504 11 1 3.1300 -5.7074 4.8044 12 6 4.4371 -4.9129 6.4032 13 6 3.5288 -4.2949 7.4793 14 1 3.5440 -3.2051 7.4902 15 6 3.7174 -4.8980 8.8475 16 6 3.4929 -6.2474 9.0448 17 6 3.6664 -6.8007 10.2999 18 6 4.0639 -6.0044 11.3573 19 6 4.2885 -4.6545 11.1598 20 6 4.7213 -3.7862 12.3130 21 9 4.8260 -4.5655 13.4701 22 9 5.9634 -3.2114 12.0234 23 9 3.7757 -2.7753 12.5161 24 6 4.1206 -4.1025 9.9040 25 6 2.3399 -4.8867 6.7039 26 6 2.9237 -1.0386 3.1735 27 8 2.6260 -0.1419 2.2282 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5138 -0.8899 30 1 3.5347 1.7702 0.0321 31 1 1.5616 2.4679 -1.2085 32 1 1.2465 -2.7422 0.8912 33 1 3.5480 -2.7678 5.0851 34 1 5.2672 -4.2699 6.1107 35 1 4.7504 -5.9322 6.6290 36 1 3.1827 -6.8698 8.2184 37 1 3.4914 -7.8552 10.4540 38 1 4.1991 -6.4365 12.3378 39 1 4.3004 -3.0490 9.7487 40 1 2.0787 -5.8993 7.0111 41 1 1.4766 -4.2231 6.6552 42 1 3.4753 -0.8407 4.0807 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705318_13456056.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:08 Heat of formation + Delta-G solvation = -141.985481 kcal Electronic energy + Delta-G solvation = -31647.125457 eV Core-core repulsion = 26532.591153 eV Total energy + Delta-G solvation = -5114.534304 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.107 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.12492 -48.64673 -48.58294 -43.78064 -41.74627 -40.39301 -38.91846 -38.07828 -34.88350 -33.91493 -32.96932 -32.36960 -31.57747 -27.22020 -27.07076 -26.84873 -26.43753 -24.83990 -23.59154 -22.59605 -22.33808 -21.16612 -20.53245 -19.44865 -19.41801 -19.30708 -19.08565 -17.88950 -17.58523 -17.53881 -17.38365 -17.10442 -16.52844 -16.30188 -16.09823 -15.89578 -15.65113 -15.50295 -15.42524 -15.05477 -15.02195 -14.99752 -14.74081 -14.70628 -14.56226 -14.34737 -14.22321 -14.02815 -13.86645 -13.71770 -13.60383 -13.38549 -13.05992 -12.90976 -12.51807 -12.18206 -12.09477 -11.95725 -11.46244 -11.12015 -10.92758 -10.69577 -10.35897 -10.21477 -9.95831 -9.87036 -5.10876 -0.21228 0.07025 0.16375 0.84547 1.07414 1.41292 1.65234 1.71743 1.86253 1.92659 2.25470 2.29442 2.70118 2.99038 3.15226 3.21982 3.33801 3.40504 3.46124 3.49350 3.52846 3.63468 3.72551 3.83708 3.85469 3.90217 4.04697 4.19349 4.22466 4.30171 4.44615 4.46617 4.52241 4.52965 4.65504 4.70513 4.72416 4.76167 4.82767 4.92173 5.02373 5.14359 5.16512 5.27627 5.44282 5.59658 5.77335 6.33137 6.34523 7.12260 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.029 4.029 3 Si 0.706 3.294 4 C -0.058 4.058 5 C -0.123 4.123 6 C -0.238 4.238 7 C 0.591 3.409 8 O -0.528 6.528 9 N -0.712 5.712 10 C 0.121 3.879 11 H 0.109 0.891 12 C -0.135 4.135 13 C -0.075 4.075 14 H 0.101 0.899 15 C -0.072 4.072 16 C -0.085 4.085 17 C -0.115 4.115 18 C -0.076 4.076 19 C -0.179 4.179 20 C 0.508 3.492 21 F -0.177 7.177 22 F -0.176 7.176 23 F -0.176 7.176 24 C -0.066 4.066 25 C -0.144 4.144 26 C 0.033 3.967 27 O -0.165 6.165 28 H 0.384 0.616 29 H 0.134 0.866 30 H -0.254 1.254 31 H -0.247 1.247 32 H 0.162 0.838 33 H 0.399 0.601 34 H 0.079 0.921 35 H 0.100 0.900 36 H 0.134 0.866 37 H 0.137 0.863 38 H 0.139 0.861 39 H 0.133 0.867 40 H 0.097 0.903 41 H 0.078 0.922 42 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.827 1.980 1.460 2.595 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.606 3.394 4 C -0.106 4.106 5 C -0.143 4.143 6 C -0.243 4.243 7 C 0.379 3.621 8 O -0.404 6.404 9 N -0.363 5.363 10 C 0.016 3.984 11 H 0.127 0.873 12 C -0.173 4.173 13 C -0.093 4.093 14 H 0.119 0.881 15 C -0.072 4.072 16 C -0.103 4.103 17 C -0.133 4.133 18 C -0.094 4.094 19 C -0.181 4.181 20 C 0.453 3.547 21 F -0.158 7.158 22 F -0.158 7.158 23 F -0.157 7.157 24 C -0.084 4.084 25 C -0.182 4.182 26 C -0.038 4.038 27 O -0.061 6.061 28 H 0.232 0.768 29 H 0.151 0.849 30 H -0.178 1.178 31 H -0.171 1.171 32 H 0.180 0.820 33 H 0.233 0.767 34 H 0.098 0.902 35 H 0.119 0.881 36 H 0.152 0.848 37 H 0.155 0.845 38 H 0.157 0.843 39 H 0.151 0.849 40 H 0.115 0.885 41 H 0.096 0.904 42 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 1.107 1.860 0.143 2.169 hybrid contribution 0.407 -0.328 0.612 0.805 sum 1.514 1.532 0.755 2.283 Atomic orbital electron populations 1.86580 1.16079 1.81724 1.49142 1.24469 0.85300 1.11371 0.92774 0.94255 0.81364 0.76524 0.87247 1.22751 1.01709 0.93414 0.92705 1.22549 1.01122 0.95329 0.95270 1.21495 1.09327 0.94247 0.99190 1.17253 0.77679 0.87153 0.79975 1.90826 1.46135 1.35643 1.67791 1.45485 1.57715 1.11887 1.21220 1.21877 0.96348 0.87626 0.92567 0.87311 1.23449 0.96679 1.02875 0.94322 1.21634 0.97687 1.00097 0.89901 0.88101 1.19647 0.99208 0.93622 0.94697 1.21305 0.96806 0.94578 0.97564 1.21204 0.99322 1.00502 0.92291 1.21077 0.96114 0.91712 1.00535 1.19973 1.09249 0.95183 0.93677 1.18313 0.75120 0.78776 0.82444 1.93180 1.95958 1.74539 1.52108 1.93229 1.43544 1.85650 1.93336 1.93233 1.64780 1.62201 1.95534 1.20778 0.96525 1.00347 0.90754 1.23621 0.97106 1.02576 0.94927 1.24463 0.99363 0.86747 0.93241 1.83684 1.57145 1.38853 1.26400 0.76798 0.84905 1.17776 1.17113 0.82027 0.76685 0.90216 0.88119 0.84802 0.84534 0.84346 0.84945 0.88467 0.90358 0.76995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.38 12.88 -35.23 -0.45 -0.07 16 2 C -0.03 0.03 2.97 36.00 0.11 0.14 16 3 Si 0.71 -1.32 32.09 -169.99 -5.46 -6.78 16 4 C -0.06 0.01 6.18 -35.74 -0.22 -0.21 16 5 C -0.12 -0.18 10.90 -37.45 -0.41 -0.59 16 6 C -0.24 -0.11 6.31 -103.28 -0.65 -0.76 16 7 C 0.59 1.00 7.81 -12.54 -0.10 0.90 16 8 O -0.53 -3.20 16.58 5.27 0.09 -3.11 16 9 N -0.71 1.42 5.26 -54.01 -0.28 1.14 16 10 C 0.12 -0.24 4.33 -67.02 -0.29 -0.53 16 11 H 0.11 -0.01 7.47 -51.93 -0.39 -0.40 16 12 C -0.14 0.50 7.29 -25.92 -0.19 0.31 16 13 C -0.07 0.26 3.86 -90.96 -0.35 -0.09 16 14 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 15 C -0.07 0.14 5.29 -104.62 -0.55 -0.41 16 16 C -0.08 0.20 8.61 -39.58 -0.34 -0.14 16 17 C -0.12 0.23 10.05 -39.58 -0.40 -0.17 16 18 C -0.08 0.06 9.43 -39.58 -0.37 -0.31 16 19 C -0.18 -0.02 5.37 -104.63 -0.56 -0.58 16 20 C 0.51 0.61 3.32 36.01 0.12 0.73 16 21 F -0.18 -0.31 15.97 2.25 0.04 -0.27 16 22 F -0.18 -0.33 17.23 2.25 0.04 -0.29 16 23 F -0.18 -0.35 17.24 2.25 0.04 -0.31 16 24 C -0.07 0.07 9.26 -39.59 -0.37 -0.30 16 25 C -0.14 0.38 7.26 -25.82 -0.19 0.20 16 26 C 0.03 -0.08 11.61 30.08 0.35 0.27 16 27 O -0.16 0.19 8.90 7.67 0.07 0.25 16 28 H 0.38 -1.79 8.70 45.56 0.40 -1.39 16 29 H 0.13 -0.17 7.96 -51.93 -0.41 -0.59 16 30 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 31 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 32 H 0.16 0.33 8.06 -52.49 -0.42 -0.10 16 33 H 0.40 -2.04 7.68 -40.82 -0.31 -2.36 16 34 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.10 -0.39 7.72 -51.93 -0.40 -0.79 16 36 H 0.13 -0.54 6.66 -52.49 -0.35 -0.89 16 37 H 0.14 -0.53 8.06 -52.49 -0.42 -0.95 16 38 H 0.14 -0.24 7.16 -52.48 -0.38 -0.61 16 39 H 0.13 -0.30 8.06 -52.49 -0.42 -0.72 16 40 H 0.10 -0.30 6.31 -51.93 -0.33 -0.63 16 41 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 42 H 0.21 -1.53 7.47 -52.48 -0.39 -1.92 16 LS Contribution 375.90 15.07 5.66 5.66 Total: 0.00 -9.54 375.90 -8.97 -18.51 By element: Atomic # 1 Polarization: -8.88 SS G_CDS: -4.30 Total: -13.18 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: -4.42 Total: -1.56 kcal Atomic # 7 Polarization: 1.42 SS G_CDS: -0.28 Total: 1.14 kcal Atomic # 8 Polarization: -2.63 SS G_CDS: -0.30 Total: -2.93 kcal Atomic # 9 Polarization: -0.99 SS G_CDS: 0.11 Total: -0.87 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.46 Total: -6.78 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -9.54 -8.97 -18.51 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_13456056.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.476 kcal (2) G-P(sol) polarization free energy of solvation -9.539 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.015 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.970 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.509 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.985 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds