Wall clock time and date at job start Tue Mar 9 2021 13:05:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47302 * 2 1 4 4 C 1.50705 * 109.47128 * 240.00095 * 2 1 3 5 5 C 1.38709 * 120.02687 * 285.02154 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00129 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.47033 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00105 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99611 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99563 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.85288 * 334.67148 * 11 10 8 13 13 C 1.53787 * 113.61033 * 105.86764 * 11 10 8 14 14 C 1.54050 * 86.98733 * 89.16241 * 13 11 10 15 15 H 1.09007 * 113.68278 * 270.87445 * 14 13 11 16 16 C 1.50698 * 113.62035 * 139.97881 * 14 13 11 17 17 C 1.38214 * 119.99691 * 142.50270 * 16 14 13 18 18 C 1.38255 * 119.99489 * 179.97438 * 17 16 14 19 19 C 1.50709 * 119.99972 * 179.97438 * 18 17 16 20 20 F 1.39901 * 109.46764 * 89.99643 * 19 18 17 21 21 F 1.39901 * 109.47126 * 209.99876 * 19 18 17 22 22 F 1.39898 * 109.46558 * 330.00037 * 19 18 17 23 23 C 1.38213 * 120.00544 * 0.02562 * 18 17 16 24 24 C 1.38262 * 119.99640 * 359.96254 * 23 18 17 25 25 C 1.38208 * 120.00088 * 359.78030 * 24 23 18 26 26 C 1.53781 * 87.07862 * 25.42768 * 14 13 11 27 27 C 1.38759 * 119.88822 * 179.97438 * 5 4 2 28 28 C 1.38126 * 119.94094 * 0.02562 * 27 5 4 29 29 C 1.38290 * 120.05768 * 359.97408 * 28 27 5 30 30 C 1.38164 * 120.02624 * 104.99828 * 4 2 1 31 31 H 0.96705 * 113.99836 * 60.00232 * 1 2 3 32 32 H 1.08997 * 109.47395 * 120.00391 * 2 1 3 33 33 H 1.48498 * 110.00059 * 298.68305 * 3 2 1 34 34 H 1.48502 * 109.99868 * 60.00019 * 3 2 1 35 35 H 1.09001 * 109.47177 * 299.99686 * 7 6 5 36 36 H 1.09002 * 109.46778 * 59.99753 * 7 6 5 37 37 H 0.97003 * 120.00302 * 0.02562 * 10 8 7 38 38 H 1.09004 * 113.61076 * 203.66202 * 13 11 10 39 39 H 1.09003 * 113.61490 * 334.56326 * 13 11 10 40 40 H 1.07995 * 120.00298 * 0.02562 * 17 16 14 41 41 H 1.07997 * 120.00464 * 179.97438 * 23 18 17 42 42 H 1.08004 * 119.99728 * 180.02562 * 24 23 18 43 43 H 1.08003 * 120.00493 * 180.25211 * 25 24 23 44 44 H 1.08991 * 113.61527 * 220.02135 * 26 14 13 45 45 H 1.09001 * 113.61174 * 89.11755 * 26 14 13 46 46 H 1.07998 * 120.02743 * 180.02562 * 27 5 4 47 47 H 1.08005 * 119.97091 * 180.02562 * 28 27 5 48 48 H 1.07995 * 119.94278 * 180.27458 * 29 28 27 49 49 H 1.07997 * 119.97398 * 0.02562 * 30 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.8693 -2.0940 -1.3072 6 8 1.3550 -2.8106 -0.2734 7 6 1.3220 -4.2315 -0.4219 8 6 0.7243 -4.8521 0.8146 9 8 0.3627 -4.1470 1.7327 10 7 0.5916 -6.1905 0.8999 11 6 0.0111 -6.7938 2.1022 12 1 0.1303 -6.1705 2.9884 13 6 -1.4233 -7.3105 1.9008 14 6 -0.7939 -8.6485 1.4687 15 1 -0.5816 -8.7080 0.4012 16 6 -1.5294 -9.8572 1.9875 17 6 -1.6571 -10.9816 1.1939 18 6 -2.3314 -12.0907 1.6701 19 6 -2.4712 -13.3166 0.8047 20 9 -1.3862 -14.1710 1.0278 21 9 -3.6607 -13.9799 1.1245 22 9 -2.4965 -12.9365 -0.5414 23 6 -2.8782 -12.0749 2.9394 24 6 -2.7501 -10.9501 3.7333 25 6 -2.0715 -9.8434 3.2593 26 6 0.4269 -8.2584 2.3186 27 6 2.3321 -2.7451 -2.4417 28 6 2.8538 -2.0144 -3.4914 29 6 2.9146 -0.6351 -3.4125 30 6 2.4537 0.0160 -2.2834 31 1 -0.3933 0.4417 -0.7651 32 1 1.7924 -0.5139 0.8899 33 1 1.5879 2.4586 -1.2242 34 1 1.5615 2.4679 1.2085 35 1 0.7154 -4.4922 -1.2892 36 1 2.3361 -4.6058 -0.5620 37 1 0.8812 -6.7545 0.1657 38 1 -1.9974 -7.3764 2.8251 39 1 -1.9626 -6.8017 1.1017 40 1 -1.2295 -10.9941 0.2023 41 1 -3.4053 -12.9411 3.3112 42 1 -3.1771 -10.9379 4.7253 43 1 -1.9680 -8.9662 3.8809 44 1 1.3803 -8.5145 1.8567 45 1 0.3577 -8.5830 3.3569 46 1 2.2845 -3.8222 -2.5040 47 1 3.2139 -2.5207 -4.3749 48 1 3.3188 -0.0653 -4.2361 49 1 2.5023 1.0932 -2.2241 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705318_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:31 Heat of formation + Delta-G solvation = -163.428720 kcal Electronic energy + Delta-G solvation = -37103.644766 eV Core-core repulsion = 31548.879234 eV Total energy + Delta-G solvation = -5554.765532 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.138 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -51.12404 -48.64376 -48.58516 -41.90039 -41.43432 -40.45992 -39.18678 -38.30266 -37.47945 -34.83360 -33.00003 -32.77734 -32.32853 -31.27264 -29.45636 -27.20645 -26.86259 -26.63855 -26.33626 -23.80396 -23.56711 -22.71105 -22.59093 -21.84369 -20.54495 -19.55076 -19.45563 -19.33699 -19.07734 -18.36539 -18.00735 -17.56111 -17.44747 -17.20914 -16.93797 -16.66233 -16.36972 -16.19861 -15.91717 -15.66729 -15.52584 -15.45889 -15.33131 -15.09740 -15.07682 -15.01320 -14.94771 -14.74193 -14.71009 -14.59095 -14.38476 -14.14904 -13.86799 -13.70427 -13.61960 -13.57109 -13.30496 -13.09996 -13.05849 -12.53534 -12.51042 -12.21666 -12.10121 -11.96106 -11.84746 -11.57334 -11.46463 -10.93557 -10.41229 -10.36422 -10.24442 -10.03163 -9.95638 -9.24203 -4.90237 -0.21333 0.07036 0.18139 0.37668 1.36659 1.37219 1.43329 1.62220 1.65217 2.03169 2.28200 2.48680 2.64728 2.70069 2.98931 3.20457 3.37558 3.40956 3.45667 3.50488 3.52555 3.62857 3.69412 3.71599 3.75728 3.82965 3.84946 3.87383 3.89441 3.99844 4.04476 4.22297 4.22981 4.31166 4.43108 4.46247 4.48759 4.51819 4.63432 4.68910 4.69516 4.74477 4.81667 4.89869 4.95581 5.02034 5.13951 5.22325 5.25831 5.29047 5.41120 5.45337 5.59544 5.65635 6.18042 6.33271 6.58477 7.04423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.145 4.145 5 C 0.152 3.848 6 O -0.277 6.277 7 C 0.039 3.961 8 C 0.519 3.481 9 O -0.504 6.504 10 N -0.712 5.712 11 C 0.122 3.878 12 H 0.108 0.892 13 C -0.144 4.144 14 C -0.075 4.075 15 H 0.101 0.899 16 C -0.072 4.072 17 C -0.067 4.067 18 C -0.180 4.180 19 C 0.508 3.492 20 F -0.176 7.176 21 F -0.176 7.176 22 F -0.177 7.177 23 C -0.074 4.074 24 C -0.115 4.115 25 C -0.085 4.085 26 C -0.134 4.134 27 C -0.212 4.212 28 C -0.072 4.072 29 C -0.151 4.151 30 C -0.083 4.083 31 H 0.370 0.630 32 H 0.118 0.882 33 H -0.260 1.260 34 H -0.257 1.257 35 H 0.094 0.906 36 H 0.095 0.905 37 H 0.402 0.598 38 H 0.097 0.903 39 H 0.077 0.923 40 H 0.135 0.865 41 H 0.136 0.864 42 H 0.137 0.863 43 H 0.134 0.866 44 H 0.080 0.920 45 H 0.101 0.899 46 H 0.129 0.871 47 H 0.128 0.872 48 H 0.129 0.871 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.081 -1.055 -2.350 4.826 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.175 4.175 3 Si 0.590 3.410 4 C -0.146 4.146 5 C 0.106 3.894 6 O -0.189 6.189 7 C -0.040 4.040 8 C 0.303 3.697 9 O -0.377 6.377 10 N -0.366 5.366 11 C 0.017 3.983 12 H 0.126 0.874 13 C -0.182 4.182 14 C -0.093 4.093 15 H 0.119 0.881 16 C -0.072 4.072 17 C -0.086 4.086 18 C -0.181 4.181 19 C 0.453 3.547 20 F -0.157 7.157 21 F -0.158 7.158 22 F -0.158 7.158 23 C -0.092 4.092 24 C -0.133 4.133 25 C -0.102 4.102 26 C -0.172 4.172 27 C -0.231 4.231 28 C -0.090 4.090 29 C -0.169 4.169 30 C -0.101 4.101 31 H 0.217 0.783 32 H 0.136 0.864 33 H -0.186 1.186 34 H -0.182 1.182 35 H 0.112 0.888 36 H 0.113 0.887 37 H 0.237 0.763 38 H 0.116 0.884 39 H 0.096 0.904 40 H 0.153 0.847 41 H 0.154 0.846 42 H 0.155 0.845 43 H 0.152 0.848 44 H 0.099 0.901 45 H 0.119 0.881 46 H 0.147 0.853 47 H 0.146 0.854 48 H 0.147 0.853 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.612 0.050 -0.938 3.732 hybrid contribution -0.952 -1.170 -1.430 2.079 sum 2.660 -1.120 -2.368 3.733 Atomic orbital electron populations 1.86706 1.17564 1.79618 1.48661 1.24900 0.84011 1.10312 0.98242 0.95120 0.91441 0.74485 0.79944 1.19640 1.05596 0.90981 0.98428 1.18788 0.93112 0.90820 0.86699 1.86235 1.77386 1.16748 1.38547 1.22459 1.02535 0.81525 0.97452 1.20025 0.78993 0.82348 0.88325 1.90809 1.47079 1.60897 1.38929 1.45476 1.64652 1.06255 1.20234 1.21845 0.93549 0.94148 0.88765 0.87398 1.23639 0.96791 0.94767 1.03048 1.21693 0.95963 0.91588 1.00093 0.88051 1.19657 0.98658 0.94773 0.94136 1.20836 0.96253 0.91429 1.00039 1.19978 1.07009 0.94387 0.96712 1.18319 0.73970 0.83741 0.78626 1.93242 1.55235 1.72778 1.94469 1.93205 1.47434 1.82599 1.92515 1.93199 1.96166 1.91126 1.35340 1.21010 0.96871 0.99303 0.92024 1.21197 0.99134 0.92656 1.00326 1.21303 0.95341 0.98514 0.95079 1.23436 0.97996 0.94149 1.01621 1.21293 1.06492 1.00422 0.94871 1.21031 0.96236 0.94101 0.97672 1.21068 1.02705 0.94574 0.98556 1.21049 0.96539 0.99949 0.92560 0.78348 0.86417 1.18562 1.18183 0.88845 0.88744 0.76289 0.88428 0.90384 0.84743 0.84587 0.84521 0.84804 0.90134 0.88068 0.85285 0.85358 0.85313 0.84764 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.02 12.88 -35.23 -0.45 -2.47 16 2 C -0.06 -0.14 2.38 36.01 0.09 -0.05 16 3 Si 0.69 0.11 30.25 -169.99 -5.14 -5.03 16 4 C -0.15 -0.22 5.27 -104.47 -0.55 -0.77 16 5 C 0.15 0.27 6.66 -39.21 -0.26 0.01 16 6 O -0.28 -0.82 9.00 -39.32 -0.35 -1.17 16 7 C 0.04 -0.04 5.22 36.01 0.19 0.14 16 8 C 0.52 0.49 7.91 -10.99 -0.09 0.41 16 9 O -0.50 -3.13 16.12 -14.35 -0.23 -3.36 16 10 N -0.71 1.79 5.26 -53.01 -0.28 1.51 16 11 C 0.12 -0.26 4.30 -67.11 -0.29 -0.55 16 12 H 0.11 -0.02 7.50 -51.93 -0.39 -0.41 16 13 C -0.14 0.36 7.27 -25.77 -0.19 0.17 16 14 C -0.08 0.26 3.87 -90.82 -0.35 -0.09 16 15 H 0.10 -0.44 8.09 -51.92 -0.42 -0.86 16 16 C -0.07 0.14 5.29 -104.62 -0.55 -0.42 16 17 C -0.07 0.06 9.06 -39.58 -0.36 -0.30 16 18 C -0.18 -0.04 5.45 -104.62 -0.57 -0.61 16 19 C 0.51 0.68 3.36 36.01 0.12 0.80 16 20 F -0.18 -0.39 17.30 2.25 0.04 -0.35 16 21 F -0.18 -0.35 16.46 2.25 0.04 -0.32 16 22 F -0.18 -0.32 16.46 2.25 0.04 -0.28 16 23 C -0.07 0.05 9.40 -39.58 -0.37 -0.32 16 24 C -0.12 0.21 10.05 -39.58 -0.40 -0.19 16 25 C -0.08 0.18 8.60 -39.58 -0.34 -0.16 16 26 C -0.13 0.51 7.29 -25.92 -0.19 0.32 16 27 C -0.21 0.10 9.04 -39.43 -0.36 -0.26 16 28 C -0.07 0.07 10.04 -39.60 -0.40 -0.33 16 29 C -0.15 0.11 10.04 -39.56 -0.40 -0.29 16 30 C -0.08 0.00 8.66 -39.61 -0.34 -0.34 16 31 H 0.37 0.16 8.70 45.56 0.40 0.56 16 32 H 0.12 0.35 7.83 -51.93 -0.41 -0.06 16 33 H -0.26 -0.32 6.68 56.52 0.38 0.06 16 34 H -0.26 -0.92 7.11 56.52 0.40 -0.52 16 35 H 0.09 -0.32 7.66 -51.93 -0.40 -0.72 16 36 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 37 H 0.40 -2.27 8.70 -40.82 -0.36 -2.62 16 38 H 0.10 -0.28 6.33 -51.93 -0.33 -0.61 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.13 -0.27 7.60 -52.49 -0.40 -0.67 16 41 H 0.14 -0.23 7.60 -52.49 -0.40 -0.63 16 42 H 0.14 -0.51 8.06 -52.48 -0.42 -0.93 16 43 H 0.13 -0.52 6.68 -52.48 -0.35 -0.87 16 44 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 45 H 0.10 -0.40 7.71 -51.93 -0.40 -0.80 16 46 H 0.13 -0.39 6.30 -52.49 -0.33 -0.72 16 47 H 0.13 -0.39 8.06 -52.48 -0.42 -0.82 16 48 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 49 H 0.13 -0.19 4.86 -52.49 -0.26 -0.44 16 LS Contribution 420.38 15.07 6.33 6.33 Total: 0.00 -10.45 420.38 -11.39 -21.84 By element: Atomic # 1 Polarization: -8.10 SS G_CDS: -5.77 Total: -13.87 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: -5.61 Total: -2.83 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -0.28 Total: 1.51 kcal Atomic # 8 Polarization: -5.96 SS G_CDS: -1.04 Total: -7.00 kcal Atomic # 9 Polarization: -1.06 SS G_CDS: 0.11 Total: -0.95 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: -5.14 Total: -5.03 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -10.45 -11.39 -21.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.593 kcal (2) G-P(sol) polarization free energy of solvation -10.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds