Wall clock time and date at job start Tue Mar 9 2021 13:05:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47302 * 2 1 4 4 C 1.50705 * 109.47128 * 240.00095 * 2 1 3 5 5 C 1.38709 * 120.02687 * 285.02154 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00129 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.47033 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00105 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99611 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99563 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.85288 * 334.67148 * 11 10 8 13 13 C 1.53787 * 113.61033 * 105.86764 * 11 10 8 14 14 C 1.54050 * 86.98733 * 89.16241 * 13 11 10 15 15 H 1.09007 * 113.68278 * 270.87445 * 14 13 11 16 16 C 1.50698 * 113.62035 * 139.97881 * 14 13 11 17 17 C 1.38214 * 119.99691 * 142.50270 * 16 14 13 18 18 C 1.38255 * 119.99489 * 179.97438 * 17 16 14 19 19 C 1.50709 * 119.99972 * 179.97438 * 18 17 16 20 20 F 1.39901 * 109.46764 * 89.99643 * 19 18 17 21 21 F 1.39901 * 109.47126 * 209.99876 * 19 18 17 22 22 F 1.39898 * 109.46558 * 330.00037 * 19 18 17 23 23 C 1.38213 * 120.00544 * 0.02562 * 18 17 16 24 24 C 1.38262 * 119.99640 * 359.96254 * 23 18 17 25 25 C 1.38208 * 120.00088 * 359.78030 * 24 23 18 26 26 C 1.53781 * 87.07862 * 25.42768 * 14 13 11 27 27 C 1.38759 * 119.88822 * 179.97438 * 5 4 2 28 28 C 1.38126 * 119.94094 * 0.02562 * 27 5 4 29 29 C 1.38290 * 120.05768 * 359.97408 * 28 27 5 30 30 C 1.38164 * 120.02624 * 104.99828 * 4 2 1 31 31 H 0.96705 * 113.99836 * 60.00232 * 1 2 3 32 32 H 1.08997 * 109.47395 * 120.00391 * 2 1 3 33 33 H 1.48498 * 110.00059 * 298.68305 * 3 2 1 34 34 H 1.48502 * 109.99868 * 60.00019 * 3 2 1 35 35 H 1.09001 * 109.47177 * 299.99686 * 7 6 5 36 36 H 1.09002 * 109.46778 * 59.99753 * 7 6 5 37 37 H 0.97003 * 120.00302 * 0.02562 * 10 8 7 38 38 H 1.09004 * 113.61076 * 203.66202 * 13 11 10 39 39 H 1.09003 * 113.61490 * 334.56326 * 13 11 10 40 40 H 1.07995 * 120.00298 * 0.02562 * 17 16 14 41 41 H 1.07997 * 120.00464 * 179.97438 * 23 18 17 42 42 H 1.08004 * 119.99728 * 180.02562 * 24 23 18 43 43 H 1.08003 * 120.00493 * 180.25211 * 25 24 23 44 44 H 1.08991 * 113.61527 * 220.02135 * 26 14 13 45 45 H 1.09001 * 113.61174 * 89.11755 * 26 14 13 46 46 H 1.07998 * 120.02743 * 180.02562 * 27 5 4 47 47 H 1.08005 * 119.97091 * 180.02562 * 28 27 5 48 48 H 1.07995 * 119.94278 * 180.27458 * 29 28 27 49 49 H 1.07997 * 119.97398 * 0.02562 * 30 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.8693 -2.0940 -1.3072 6 8 1.3550 -2.8106 -0.2734 7 6 1.3220 -4.2315 -0.4219 8 6 0.7243 -4.8521 0.8146 9 8 0.3627 -4.1470 1.7327 10 7 0.5916 -6.1905 0.8999 11 6 0.0111 -6.7938 2.1022 12 1 0.1303 -6.1705 2.9884 13 6 -1.4233 -7.3105 1.9008 14 6 -0.7939 -8.6485 1.4687 15 1 -0.5816 -8.7080 0.4012 16 6 -1.5294 -9.8572 1.9875 17 6 -1.6571 -10.9816 1.1939 18 6 -2.3314 -12.0907 1.6701 19 6 -2.4712 -13.3166 0.8047 20 9 -1.3862 -14.1710 1.0278 21 9 -3.6607 -13.9799 1.1245 22 9 -2.4965 -12.9365 -0.5414 23 6 -2.8782 -12.0749 2.9394 24 6 -2.7501 -10.9501 3.7333 25 6 -2.0715 -9.8434 3.2593 26 6 0.4269 -8.2584 2.3186 27 6 2.3321 -2.7451 -2.4417 28 6 2.8538 -2.0144 -3.4914 29 6 2.9146 -0.6351 -3.4125 30 6 2.4537 0.0160 -2.2834 31 1 -0.3933 0.4417 -0.7651 32 1 1.7924 -0.5139 0.8899 33 1 1.5879 2.4586 -1.2242 34 1 1.5615 2.4679 1.2085 35 1 0.7154 -4.4922 -1.2892 36 1 2.3361 -4.6058 -0.5620 37 1 0.8812 -6.7545 0.1657 38 1 -1.9974 -7.3764 2.8251 39 1 -1.9626 -6.8017 1.1017 40 1 -1.2295 -10.9941 0.2023 41 1 -3.4053 -12.9411 3.3112 42 1 -3.1771 -10.9379 4.7253 43 1 -1.9680 -8.9662 3.8809 44 1 1.3803 -8.5145 1.8567 45 1 0.3577 -8.5830 3.3569 46 1 2.2845 -3.8222 -2.5040 47 1 3.2139 -2.5207 -4.3749 48 1 3.3188 -0.0653 -4.2361 49 1 2.5023 1.0932 -2.2241 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:29 Heat of formation + Delta-G solvation = -160.793129 kcal Electronic energy + Delta-G solvation = -37103.530478 eV Core-core repulsion = 31548.879234 eV Total energy + Delta-G solvation = -5554.651244 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.138 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -51.24109 -48.76633 -48.71525 -41.82000 -41.35329 -40.43188 -39.10738 -38.35239 -37.59935 -34.81880 -32.90687 -32.74336 -32.21014 -31.19254 -29.38314 -27.16092 -26.69225 -26.67261 -26.18319 -23.74308 -23.44674 -22.65705 -22.54368 -21.81603 -20.44554 -19.57594 -19.53567 -19.43382 -18.99700 -18.34813 -18.09508 -17.51105 -17.33087 -17.13433 -16.90093 -16.61171 -16.33359 -16.08916 -15.96327 -15.64961 -15.60390 -15.52023 -15.38650 -15.17677 -15.06172 -15.02542 -14.98762 -14.87794 -14.73311 -14.48998 -14.25418 -14.18151 -13.78081 -13.72727 -13.54452 -13.41862 -13.22164 -13.04556 -12.95019 -12.52777 -12.41836 -12.12099 -11.92083 -11.85885 -11.79723 -11.68213 -11.28965 -11.03753 -10.53428 -10.24823 -10.16472 -9.96649 -9.81285 -9.20614 -4.95481 -0.10392 0.21354 0.24619 0.43127 1.28950 1.40482 1.46782 1.54208 1.60025 1.93405 2.41166 2.58345 2.66552 2.71173 2.94605 3.34033 3.41270 3.45431 3.50120 3.62465 3.67128 3.72842 3.82727 3.90248 3.91310 3.97808 4.05287 4.07219 4.08320 4.14062 4.22634 4.32903 4.37600 4.38405 4.54679 4.60934 4.63821 4.68510 4.75133 4.82163 4.88406 4.93889 4.99116 5.00359 5.10579 5.15547 5.29448 5.30022 5.38726 5.40339 5.54432 5.58166 5.76365 5.77146 6.27975 6.45459 6.52681 7.10705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.082 4.082 3 Si 0.782 3.218 4 C -0.164 4.164 5 C 0.129 3.871 6 O -0.313 6.313 7 C 0.036 3.964 8 C 0.515 3.485 9 O -0.569 6.569 10 N -0.693 5.693 11 C 0.114 3.886 12 H 0.084 0.916 13 C -0.144 4.144 14 C -0.066 4.066 15 H 0.116 0.884 16 C -0.074 4.074 17 C -0.075 4.075 18 C -0.194 4.194 19 C 0.506 3.494 20 F -0.183 7.183 21 F -0.183 7.183 22 F -0.181 7.181 23 C -0.086 4.086 24 C -0.118 4.118 25 C -0.087 4.087 26 C -0.121 4.121 27 C -0.211 4.211 28 C -0.075 4.075 29 C -0.155 4.155 30 C -0.088 4.088 31 H 0.381 0.619 32 H 0.097 0.903 33 H -0.266 1.266 34 H -0.308 1.308 35 H 0.120 0.880 36 H 0.126 0.874 37 H 0.421 0.579 38 H 0.100 0.900 39 H 0.067 0.933 40 H 0.143 0.857 41 H 0.140 0.860 42 H 0.155 0.845 43 H 0.150 0.850 44 H 0.093 0.907 45 H 0.105 0.895 46 H 0.155 0.845 47 H 0.153 0.847 48 H 0.150 0.850 49 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.310 -1.555 -4.114 6.895 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.190 4.190 3 Si 0.686 3.314 4 C -0.165 4.165 5 C 0.084 3.916 6 O -0.226 6.226 7 C -0.042 4.042 8 C 0.301 3.699 9 O -0.447 6.447 10 N -0.347 5.347 11 C 0.009 3.991 12 H 0.102 0.898 13 C -0.182 4.182 14 C -0.084 4.084 15 H 0.134 0.866 16 C -0.074 4.074 17 C -0.093 4.093 18 C -0.196 4.196 19 C 0.452 3.548 20 F -0.165 7.165 21 F -0.164 7.164 22 F -0.163 7.163 23 C -0.104 4.104 24 C -0.136 4.136 25 C -0.104 4.104 26 C -0.159 4.159 27 C -0.230 4.230 28 C -0.093 4.093 29 C -0.173 4.173 30 C -0.106 4.106 31 H 0.230 0.770 32 H 0.115 0.885 33 H -0.192 1.192 34 H -0.236 1.236 35 H 0.137 0.863 36 H 0.143 0.857 37 H 0.259 0.741 38 H 0.118 0.882 39 H 0.086 0.914 40 H 0.161 0.839 41 H 0.158 0.842 42 H 0.173 0.827 43 H 0.168 0.832 44 H 0.111 0.889 45 H 0.123 0.877 46 H 0.173 0.827 47 H 0.171 0.829 48 H 0.167 0.833 49 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 4.857 -0.527 -2.757 5.610 hybrid contribution -1.372 -1.076 -0.857 1.943 sum 3.485 -1.603 -3.614 5.270 Atomic orbital electron populations 1.86651 1.18987 1.80344 1.49668 1.25201 0.83241 1.12344 0.98184 0.94055 0.89873 0.70961 0.76555 1.19705 1.06765 0.91479 0.98589 1.19060 0.94098 0.91078 0.87362 1.86188 1.77969 1.18686 1.39712 1.22710 1.04569 0.79955 0.96933 1.20528 0.78119 0.82961 0.88246 1.90781 1.50175 1.62482 1.41261 1.45343 1.63273 1.05443 1.20605 1.21867 0.94352 0.94730 0.88166 0.89818 1.23635 0.96379 0.95288 1.02916 1.21684 0.95556 0.90190 1.00942 0.86590 1.19811 0.98561 0.94836 0.94154 1.21002 0.96266 0.91419 1.00651 1.20009 1.08298 0.94227 0.97031 1.18506 0.73509 0.84073 0.78662 1.93221 1.55569 1.73165 1.94504 1.93185 1.47819 1.82847 1.92556 1.93182 1.96164 1.91137 1.35772 1.21183 0.97156 1.00055 0.92014 1.21455 0.98908 0.92259 1.00982 1.21576 0.94692 0.98941 0.95222 1.23381 0.98410 0.92124 1.01975 1.21595 1.05567 1.01837 0.93990 1.21402 0.95445 0.94181 0.98227 1.21400 1.02053 0.95132 0.98670 1.21186 0.96474 1.00484 0.92462 0.77033 0.88517 1.19154 1.23645 0.86258 0.85663 0.74089 0.88178 0.91447 0.83879 0.84189 0.82743 0.83210 0.88863 0.87706 0.82730 0.82887 0.83273 0.83713 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -5.68 12.88 -148.98 -1.92 -7.60 16 2 C -0.08 -0.52 2.38 71.24 0.17 -0.35 16 3 Si 0.78 1.03 30.25 68.60 2.07 3.11 16 4 C -0.16 -0.66 5.27 -19.77 -0.10 -0.76 16 5 C 0.13 0.52 6.66 22.51 0.15 0.67 16 6 O -0.31 -2.28 9.00 -73.34 -0.66 -2.94 16 7 C 0.04 -0.09 5.22 71.24 0.37 0.29 16 8 C 0.52 1.49 7.91 87.66 0.69 2.19 16 9 O -0.57 -8.69 16.12 16.01 0.26 -8.43 16 10 N -0.69 3.60 5.26 -440.02 -2.32 1.29 16 11 C 0.11 -0.45 4.30 45.52 0.20 -0.25 16 12 H 0.08 0.13 7.50 -2.39 -0.02 0.11 16 13 C -0.14 0.71 7.27 31.21 0.23 0.93 16 14 C -0.07 0.52 3.87 -10.92 -0.04 0.48 16 15 H 0.12 -1.24 8.09 -2.38 -0.02 -1.26 16 16 C -0.07 0.33 5.29 -19.87 -0.11 0.23 16 17 C -0.08 0.15 9.06 22.27 0.20 0.36 16 18 C -0.19 -0.14 5.45 -19.86 -0.11 -0.25 16 19 C 0.51 1.68 3.36 71.24 0.24 1.92 16 20 F -0.18 -0.93 17.30 44.97 0.78 -0.15 16 21 F -0.18 -0.89 16.46 44.97 0.74 -0.15 16 22 F -0.18 -0.74 16.46 44.97 0.74 0.00 16 23 C -0.09 0.10 9.40 22.27 0.21 0.31 16 24 C -0.12 0.49 10.05 22.27 0.22 0.72 16 25 C -0.09 0.44 8.60 22.27 0.19 0.63 16 26 C -0.12 1.04 7.29 31.12 0.23 1.27 16 27 C -0.21 0.48 9.04 22.37 0.20 0.68 16 28 C -0.07 0.30 10.04 22.26 0.22 0.52 16 29 C -0.15 0.47 10.04 22.28 0.22 0.70 16 30 C -0.09 0.04 8.66 22.25 0.19 0.23 16 31 H 0.38 1.12 8.70 -74.05 -0.64 0.48 16 32 H 0.10 0.92 7.83 -2.39 -0.02 0.91 16 33 H -0.27 -0.54 6.68 99.48 0.66 0.13 16 34 H -0.31 -2.96 7.11 99.48 0.71 -2.25 16 35 H 0.12 -0.97 7.66 -2.39 -0.02 -0.99 16 36 H 0.13 -1.15 7.66 -2.39 -0.02 -1.17 16 37 H 0.42 -5.40 8.70 -92.71 -0.81 -6.21 16 38 H 0.10 -0.55 6.33 -2.39 -0.02 -0.57 16 39 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 40 H 0.14 -0.65 7.60 -2.91 -0.02 -0.68 16 41 H 0.14 -0.40 7.60 -2.91 -0.02 -0.42 16 42 H 0.15 -1.29 8.06 -2.91 -0.02 -1.31 16 43 H 0.15 -1.31 6.68 -2.91 -0.02 -1.33 16 44 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 45 H 0.10 -0.92 7.71 -2.39 -0.02 -0.94 16 46 H 0.16 -1.33 6.30 -2.91 -0.02 -1.35 16 47 H 0.15 -1.42 8.06 -2.91 -0.02 -1.44 16 48 H 0.15 -1.13 8.06 -2.91 -0.02 -1.15 16 49 H 0.15 -0.50 4.86 -2.91 -0.01 -0.52 16 Total: 0.00 -28.38 420.38 2.87 -25.51 By element: Atomic # 1 Polarization: -20.73 SS G_CDS: -0.41 Total: -21.14 kcal Atomic # 6 Polarization: 6.92 SS G_CDS: 3.58 Total: 10.50 kcal Atomic # 7 Polarization: 3.60 SS G_CDS: -2.32 Total: 1.29 kcal Atomic # 8 Polarization: -16.65 SS G_CDS: -2.32 Total: -18.97 kcal Atomic # 9 Polarization: -2.55 SS G_CDS: 2.26 Total: -0.29 kcal Atomic # 14 Polarization: 1.03 SS G_CDS: 2.07 Total: 3.11 kcal Total: -28.38 2.87 -25.51 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.281 kcal (2) G-P(sol) polarization free energy of solvation -28.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.661 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.868 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.512 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds