Wall clock time and date at job start Tue Mar 9 2021 13:05:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86303 * 109.46959 * 2 1 4 4 C 1.50693 * 109.47273 * 239.99742 * 2 1 3 5 5 C 1.38242 * 119.97606 * 120.00177 * 4 2 1 6 6 C 1.38287 * 120.11592 * 179.97438 * 5 4 2 7 7 C 1.38119 * 120.05540 * 0.04054 * 6 5 4 8 8 C 1.38759 * 119.94334 * 359.97438 * 7 6 5 9 9 O 1.35896 * 120.05322 * 180.02562 * 8 7 6 10 10 C 1.42905 * 117.00344 * 359.97438 * 9 8 7 11 11 C 1.52997 * 109.47343 * 180.02562 * 10 9 8 12 12 C 1.50696 * 109.47258 * 179.97438 * 11 10 9 13 13 O 1.21285 * 119.99816 * 0.02562 * 12 11 10 14 14 N 1.34773 * 120.00144 * 180.02562 * 12 11 10 15 15 C 1.46498 * 120.00215 * 180.02562 * 14 12 11 16 16 H 1.09008 * 112.85028 * 23.80452 * 15 14 12 17 17 C 1.53779 * 113.61678 * 154.99817 * 15 14 12 18 18 C 1.53790 * 87.07932 * 89.20164 * 17 15 14 19 19 H 1.09003 * 113.60940 * 270.79771 * 18 17 15 20 20 C 1.50701 * 113.61239 * 139.98379 * 18 17 15 21 21 C 1.38217 * 120.00022 * 299.97079 * 20 18 17 22 22 C 1.38256 * 120.00087 * 179.97438 * 21 20 18 23 23 C 1.38215 * 119.99734 * 0.05278 * 22 21 20 24 24 C 1.38253 * 120.00294 * 359.97438 * 23 22 21 25 25 C 1.50696 * 119.99941 * 180.02562 * 24 23 22 26 26 F 1.39891 * 109.47206 * 359.97438 * 25 24 23 27 27 F 1.39900 * 109.47125 * 120.00017 * 25 24 23 28 28 F 1.39901 * 109.46951 * 239.99734 * 25 24 23 29 29 C 1.38212 * 119.99859 * 359.97438 * 24 23 22 30 30 C 1.53781 * 113.69099 * 252.53839 * 15 14 12 31 31 C 1.38172 * 119.97403 * 300.29755 * 4 2 1 32 32 H 0.96698 * 114.00305 * 300.00158 * 1 2 3 33 33 H 1.09004 * 109.46713 * 119.99681 * 2 1 3 34 34 H 1.48498 * 109.99494 * 299.99611 * 3 2 1 35 35 H 1.48500 * 110.00192 * 61.31545 * 3 2 1 36 36 H 1.08004 * 119.93997 * 359.97438 * 5 4 2 37 37 H 1.07999 * 119.97316 * 180.02562 * 6 5 4 38 38 H 1.08000 * 120.02740 * 179.97438 * 7 6 5 39 39 H 1.08997 * 109.46428 * 60.00437 * 10 9 8 40 40 H 1.09000 * 109.46889 * 300.00611 * 10 9 8 41 41 H 1.09006 * 109.47152 * 60.00164 * 11 10 9 42 42 H 1.08995 * 109.47308 * 300.00818 * 11 10 9 43 43 H 0.96998 * 119.99967 * 0.02562 * 14 12 11 44 44 H 1.09001 * 113.61582 * 334.65364 * 17 15 14 45 45 H 1.08999 * 113.61838 * 203.74852 * 17 15 14 46 46 H 1.08001 * 119.99701 * 0.02591 * 21 20 18 47 47 H 1.07995 * 120.00047 * 180.32212 * 22 21 20 48 48 H 1.08000 * 119.99306 * 179.97438 * 23 22 21 49 49 H 1.08000 * 119.99961 * 180.02562 * 29 24 23 50 50 H 1.09004 * 113.61691 * 156.32170 * 30 15 14 51 51 H 1.09001 * 113.61473 * 25.41556 * 30 15 14 52 52 H 1.08004 * 120.02501 * 0.02562 * 31 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7262 -0.0381 -2.1400 6 6 3.1892 -0.6874 -3.2698 7 6 2.8577 -2.0096 -3.4925 8 6 2.0599 -2.6866 -2.5811 9 8 1.7328 -3.9877 -2.7978 10 6 2.2447 -4.5964 -3.9851 11 6 1.7739 -6.0504 -4.0565 12 6 2.3132 -6.6921 -5.3088 13 8 3.0064 -6.0498 -6.0691 14 7 2.0254 -7.9797 -5.5840 15 6 2.5501 -8.6037 -6.8011 16 1 3.4494 -8.1134 -7.1742 17 6 2.6777 -10.1330 -6.7035 18 6 1.2334 -10.2081 -7.2263 19 1 0.4817 -10.1842 -6.4373 20 6 1.0070 -11.3212 -8.2167 21 6 1.7247 -11.3522 -9.3975 22 6 1.5174 -12.3737 -10.3059 23 6 0.5917 -13.3633 -10.0336 24 6 -0.1266 -13.3320 -8.8527 25 6 -1.1354 -14.4113 -8.5556 26 9 -1.1666 -15.3248 -9.6146 27 9 -0.7756 -15.0745 -7.3775 28 9 -2.4011 -13.8362 -8.3990 29 6 0.0814 -12.3114 -7.9442 30 6 1.4835 -8.8404 -7.8833 31 6 1.5922 -2.0315 -1.4515 32 1 -0.3934 0.4417 0.7650 33 1 1.7923 -0.5138 0.8901 34 1 1.5615 2.4678 -1.2086 35 1 1.5878 2.4586 1.2242 36 1 2.9859 0.9960 -1.9680 37 1 3.8103 -0.1601 -3.9787 38 1 3.2192 -2.5161 -4.3752 39 1 3.3341 -4.5674 -3.9674 40 1 1.8808 -4.0537 -4.8575 41 1 0.6844 -6.0791 -4.0743 42 1 2.1374 -6.5933 -3.1841 43 1 1.4707 -8.4932 -4.9761 44 1 2.7921 -10.4974 -5.6826 45 1 3.4127 -10.5545 -7.3892 46 1 2.4480 -10.5789 -9.6103 47 1 2.0819 -12.4008 -11.2262 48 1 0.4295 -14.1610 -10.7434 49 1 -0.4794 -12.2872 -7.0215 50 1 1.8920 -8.9084 -8.8916 51 1 0.6337 -8.1612 -7.8148 52 1 0.9670 -2.5548 -0.7432 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_4549614.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:42 Heat of formation + Delta-G solvation = -170.675717 kcal Electronic energy + Delta-G solvation = -38043.660419 eV Core-core repulsion = 32333.043015 eV Total energy + Delta-G solvation = -5710.617404 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.154 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -51.24333 -48.77202 -48.71343 -41.71685 -41.27649 -40.51583 -39.21710 -38.82196 -37.44909 -34.75097 -33.35890 -32.80655 -32.60141 -32.00211 -30.77956 -27.20200 -27.11876 -26.65039 -26.50324 -25.10789 -23.66209 -23.46946 -22.60653 -22.06021 -21.45615 -20.38142 -19.56916 -19.44572 -19.22089 -18.99599 -18.56866 -17.96651 -17.49560 -17.35275 -17.28021 -17.09255 -16.93238 -16.40632 -16.16376 -15.89625 -15.79377 -15.65221 -15.63813 -15.49478 -15.15823 -15.04216 -14.97080 -14.87884 -14.73196 -14.59187 -14.53859 -14.39019 -14.18922 -14.10755 -13.92304 -13.77892 -13.48095 -13.43414 -13.24557 -12.97326 -12.91294 -12.86151 -12.40308 -12.35381 -12.02162 -11.88748 -11.81561 -11.76227 -11.68537 -11.26704 -11.07417 -10.57284 -10.22823 -10.10870 -9.90056 -9.80520 -9.27587 -4.91050 -0.09701 0.19200 0.21990 0.38795 1.28625 1.49682 1.60215 1.61343 1.69353 1.96145 2.42019 2.46674 2.62483 2.66801 2.94785 3.34246 3.36235 3.44148 3.55158 3.63709 3.68140 3.75830 3.83168 3.84401 3.89001 3.93675 3.99122 4.06963 4.09643 4.10740 4.23408 4.23545 4.25765 4.35104 4.38475 4.48500 4.61445 4.63536 4.66791 4.67497 4.76403 4.77248 4.86097 4.89612 4.95774 4.97489 5.02688 5.13493 5.17174 5.24490 5.31266 5.37303 5.43141 5.45011 5.61491 5.68874 5.77309 6.32309 6.45137 6.58221 7.14769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.090 4.090 3 Si 0.771 3.229 4 C -0.048 4.048 5 C -0.160 4.160 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.117 3.883 9 O -0.324 6.324 10 C 0.073 3.927 11 C -0.133 4.133 12 C 0.524 3.476 13 O -0.581 6.581 14 N -0.699 5.699 15 C 0.114 3.886 16 H 0.089 0.911 17 C -0.124 4.124 18 C -0.069 4.069 19 H 0.112 0.888 20 C -0.073 4.073 21 C -0.086 4.086 22 C -0.118 4.118 23 C -0.089 4.089 24 C -0.194 4.194 25 C 0.506 3.494 26 F -0.182 7.182 27 F -0.182 7.182 28 F -0.183 7.183 29 C -0.076 4.076 30 C -0.142 4.142 31 C -0.143 4.143 32 H 0.396 0.604 33 H 0.097 0.903 34 H -0.299 1.299 35 H -0.284 1.284 36 H 0.146 0.854 37 H 0.155 0.845 38 H 0.139 0.861 39 H 0.068 0.932 40 H 0.063 0.937 41 H 0.124 0.876 42 H 0.128 0.872 43 H 0.418 0.582 44 H 0.088 0.912 45 H 0.104 0.896 46 H 0.152 0.848 47 H 0.156 0.844 48 H 0.142 0.858 49 H 0.139 0.861 50 H 0.102 0.898 51 H 0.068 0.932 52 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.189 -0.192 1.571 4.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.198 4.198 3 Si 0.676 3.324 4 C -0.048 4.048 5 C -0.177 4.177 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.072 3.928 9 O -0.238 6.238 10 C -0.002 4.002 11 C -0.173 4.173 12 C 0.311 3.689 13 O -0.461 6.461 14 N -0.351 5.351 15 C 0.009 3.991 16 H 0.107 0.893 17 C -0.162 4.162 18 C -0.087 4.087 19 H 0.130 0.870 20 C -0.073 4.073 21 C -0.104 4.104 22 C -0.135 4.135 23 C -0.107 4.107 24 C -0.195 4.195 25 C 0.452 3.548 26 F -0.163 7.163 27 F -0.164 7.164 28 F -0.165 7.165 29 C -0.094 4.094 30 C -0.180 4.180 31 C -0.161 4.161 32 H 0.246 0.754 33 H 0.115 0.885 34 H -0.226 1.226 35 H -0.211 1.211 36 H 0.163 0.837 37 H 0.173 0.827 38 H 0.157 0.843 39 H 0.086 0.914 40 H 0.081 0.919 41 H 0.142 0.858 42 H 0.146 0.854 43 H 0.256 0.744 44 H 0.107 0.893 45 H 0.123 0.877 46 H 0.170 0.830 47 H 0.173 0.827 48 H 0.160 0.840 49 H 0.157 0.843 50 H 0.120 0.880 51 H 0.087 0.913 52 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 4.411 0.583 0.624 4.492 hybrid contribution -1.866 -0.842 0.488 2.104 sum 2.544 -0.258 1.111 2.788 Atomic orbital electron populations 1.86549 1.18458 1.80801 1.51078 1.25111 0.84164 1.12242 0.98267 0.94017 0.90348 0.71581 0.76469 1.19304 0.96771 0.92972 0.95731 1.21132 1.00875 1.00618 0.95082 1.21236 0.97689 0.93480 0.96858 1.21557 1.03208 0.97047 1.01190 1.19109 0.95219 0.83559 0.94907 1.85946 1.71479 1.22680 1.43737 1.22458 0.99108 0.93215 0.85449 1.21439 1.04842 0.93954 0.97066 1.20572 0.79311 0.82111 0.86869 1.90741 1.40078 1.63577 1.51660 1.45538 1.53180 1.11556 1.24801 1.21858 0.97502 0.94226 0.85561 0.89273 1.23395 0.95979 0.93367 1.03478 1.21644 0.98622 0.91663 0.96748 0.86993 1.19811 0.95676 0.95744 0.96061 1.21584 0.98117 0.98101 0.92567 1.21471 0.97628 0.93543 1.00892 1.21246 0.94719 0.99660 0.95031 1.19995 1.01551 0.97862 1.00102 1.18511 0.80667 0.81647 0.73957 1.93158 1.96573 1.69339 1.57220 1.93211 1.91641 1.82528 1.49005 1.93211 1.43401 1.84452 1.95424 1.20952 0.97423 0.92505 0.98547 1.23577 0.99337 0.95827 0.99293 1.20320 1.03431 0.94764 0.97617 0.75379 0.88511 1.22630 1.21093 0.83661 0.82722 0.84280 0.91357 0.91864 0.85756 0.85401 0.74407 0.89350 0.87725 0.82999 0.82653 0.83988 0.84278 0.88011 0.91335 0.85396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.01 12.74 -148.98 -1.90 -3.91 16 2 C -0.09 -0.07 2.81 71.23 0.20 0.13 16 3 Si 0.77 -1.20 29.79 68.60 2.04 0.85 16 4 C -0.05 -0.22 5.42 -19.88 -0.11 -0.32 16 5 C -0.16 -0.36 8.67 22.28 0.19 -0.17 16 6 C -0.07 -0.14 10.04 22.25 0.22 0.09 16 7 C -0.21 -0.88 9.04 22.37 0.20 -0.68 16 8 C 0.12 0.77 6.69 22.51 0.15 0.92 16 9 O -0.32 -1.67 10.14 -92.38 -0.94 -2.60 16 10 C 0.07 0.10 4.03 71.98 0.29 0.39 16 11 C -0.13 0.61 6.07 29.85 0.18 0.79 16 12 C 0.52 -0.37 7.83 87.66 0.69 0.32 16 13 O -0.58 -4.82 15.58 -3.05 -0.05 -4.86 16 14 N -0.70 4.35 5.27 -440.04 -2.32 2.03 16 15 C 0.11 -0.61 4.32 45.52 0.20 -0.41 16 16 H 0.09 -0.08 7.47 -2.38 -0.02 -0.10 16 17 C -0.12 1.09 7.29 31.12 0.23 1.32 16 18 C -0.07 0.55 3.86 -11.01 -0.04 0.50 16 19 H 0.11 -1.11 8.09 -2.39 -0.02 -1.13 16 20 C -0.07 0.34 5.29 -19.87 -0.11 0.23 16 21 C -0.09 0.48 8.61 22.27 0.19 0.68 16 22 C -0.12 0.54 10.05 22.27 0.22 0.76 16 23 C -0.09 0.11 9.43 22.27 0.21 0.32 16 24 C -0.19 -0.16 5.37 -19.87 -0.11 -0.27 16 25 C 0.51 1.81 3.32 71.23 0.24 2.05 16 26 F -0.18 -0.84 15.97 44.97 0.72 -0.12 16 27 F -0.18 -0.91 17.24 44.97 0.78 -0.13 16 28 F -0.18 -0.97 17.24 44.97 0.78 -0.19 16 29 C -0.08 0.13 9.26 22.27 0.21 0.34 16 30 C -0.14 0.88 7.26 31.12 0.23 1.10 16 31 C -0.14 -0.97 9.55 22.37 0.21 -0.76 16 32 H 0.40 -1.94 8.74 -74.06 -0.65 -2.58 16 33 H 0.10 -0.31 7.96 -2.38 -0.02 -0.33 16 34 H -0.30 -1.73 7.11 99.48 0.71 -1.02 16 35 H -0.28 -0.60 7.11 99.48 0.71 0.11 16 36 H 0.15 -0.31 4.87 -2.91 -0.01 -0.33 16 37 H 0.16 -0.56 8.06 -2.91 -0.02 -0.58 16 38 H 0.14 0.29 6.30 -2.91 -0.02 0.27 16 39 H 0.07 0.14 7.62 -2.39 -0.02 0.12 16 40 H 0.06 0.18 7.62 -2.39 -0.02 0.17 16 41 H 0.12 -0.96 8.14 -2.38 -0.02 -0.98 16 42 H 0.13 -1.07 8.14 -2.39 -0.02 -1.09 16 43 H 0.42 -5.04 8.70 -92.71 -0.81 -5.85 16 44 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 45 H 0.10 -0.96 7.72 -2.39 -0.02 -0.98 16 46 H 0.15 -1.47 6.66 -2.91 -0.02 -1.49 16 47 H 0.16 -1.39 8.06 -2.91 -0.02 -1.41 16 48 H 0.14 -0.41 7.16 -2.91 -0.02 -0.43 16 49 H 0.14 -0.55 8.05 -2.91 -0.02 -0.57 16 50 H 0.10 -0.73 6.31 -2.39 -0.02 -0.75 16 51 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 52 H 0.13 0.84 8.06 -2.91 -0.02 0.82 16 Total: 0.00 -23.34 442.39 2.40 -20.94 By element: Atomic # 1 Polarization: -18.91 SS G_CDS: -0.41 Total: -19.32 kcal Atomic # 6 Polarization: 3.62 SS G_CDS: 3.70 Total: 7.32 kcal Atomic # 7 Polarization: 4.35 SS G_CDS: -2.32 Total: 2.03 kcal Atomic # 8 Polarization: -8.50 SS G_CDS: -2.88 Total: -11.38 kcal Atomic # 9 Polarization: -2.71 SS G_CDS: 2.27 Total: -0.45 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: 2.04 Total: 0.85 kcal Total: -23.34 2.40 -20.94 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_4549614.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.734 kcal (2) G-P(sol) polarization free energy of solvation -23.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.074 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.942 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds