Wall clock time and date at job start Tue Mar 9 2021 13:06:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35899 * 117.00089 * 2 1 4 4 C 1.38615 * 120.02489 * 179.97438 * 3 2 1 5 5 C 1.38658 * 119.88665 * 180.02562 * 4 3 2 6 6 O 1.35904 * 120.02505 * 179.97438 * 5 4 3 7 7 C 1.42896 * 116.99782 * 359.97438 * 6 5 4 8 8 C 1.50705 * 109.46906 * 180.02562 * 7 6 5 9 9 O 1.21280 * 119.99770 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00180 * 180.02562 * 8 7 6 11 11 C 1.46498 * 120.00254 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.85199 * 336.20187 * 11 10 8 13 13 C 1.53786 * 113.60955 * 107.50253 * 11 10 8 14 14 C 1.53782 * 87.07864 * 89.11695 * 13 11 10 15 15 H 1.08994 * 113.69156 * 270.87065 * 14 13 11 16 16 C 1.50707 * 113.61239 * 139.97687 * 14 13 11 17 17 C 1.38216 * 119.99835 * 142.50464 * 16 14 13 18 18 C 1.38255 * 119.99744 * 179.97438 * 17 16 14 19 19 C 1.50707 * 119.99843 * 180.02562 * 18 17 16 20 20 F 1.39893 * 109.46897 * 179.97438 * 19 18 17 21 21 F 1.39903 * 109.46634 * 299.97597 * 19 18 17 22 22 F 1.39897 * 109.47098 * 59.97077 * 19 18 17 23 23 C 1.38212 * 120.00300 * 359.97134 * 18 17 16 24 24 C 1.38260 * 119.99650 * 0.28729 * 23 18 17 25 25 C 1.38208 * 120.00082 * 359.50197 * 24 23 18 26 26 C 1.53781 * 113.61433 * 204.99897 * 11 10 8 27 27 C 1.38750 * 119.94807 * 0.25665 * 5 4 3 28 28 C 1.50696 * 119.97329 * 179.74694 * 27 5 4 29 29 O 1.42896 * 109.47109 * 284.99858 * 28 27 5 30 30 Si 1.86303 * 109.47289 * 164.99953 * 28 27 5 31 31 C 1.38199 * 120.05008 * 359.49096 * 27 5 4 32 32 C 1.38147 * 120.11386 * 0.50631 * 31 27 5 33 33 H 1.09001 * 109.47427 * 179.97438 * 1 2 3 34 34 H 1.09006 * 109.46921 * 299.99660 * 1 2 3 35 35 H 1.09001 * 109.47207 * 59.99316 * 1 2 3 36 36 H 1.07995 * 120.05770 * 0.04905 * 4 3 2 37 37 H 1.09002 * 109.47380 * 60.00416 * 7 6 5 38 38 H 1.09003 * 109.47557 * 300.00129 * 7 6 5 39 39 H 0.97008 * 119.99495 * 0.02562 * 10 8 7 40 40 H 1.08996 * 113.61435 * 334.57390 * 13 11 10 41 41 H 1.09003 * 113.61122 * 203.66333 * 13 11 10 42 42 H 1.08005 * 120.00025 * 359.97438 * 17 16 14 43 43 H 1.08002 * 119.99812 * 180.02562 * 23 18 17 44 44 H 1.08004 * 119.99616 * 179.72197 * 24 23 18 45 45 H 1.07999 * 119.99944 * 180.28399 * 25 24 23 46 46 H 1.09003 * 113.61068 * 156.34002 * 26 11 10 47 47 H 1.08999 * 113.61730 * 25.43851 * 26 11 10 48 48 H 1.09004 * 109.47488 * 44.99781 * 28 27 5 49 49 H 0.96701 * 114.00357 * 180.02562 * 29 28 27 50 50 H 1.48504 * 109.99712 * 298.68036 * 30 28 27 51 51 H 1.48498 * 109.99956 * 59.99463 * 30 28 27 52 52 H 1.08000 * 119.94220 * 180.25340 * 31 27 5 53 53 H 1.08003 * 119.97651 * 179.71818 * 32 31 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4302 1.2840 0.0005 5 6 4.0567 2.5209 0.0011 6 8 5.4137 2.5959 0.0021 7 6 6.1316 1.3604 0.0032 8 6 7.6125 1.6400 0.0049 9 8 8.0135 2.7846 0.0047 10 7 8.4912 0.6181 0.0056 11 6 9.9308 0.8898 0.0067 12 1 10.1765 1.8714 -0.3984 13 6 10.6136 0.5877 1.3511 14 6 10.8300 -0.8429 0.8300 15 1 10.0056 -1.5199 1.0537 16 6 12.1751 -1.4195 1.1902 17 6 12.2873 -2.7564 1.5223 18 6 13.5213 -3.2855 1.8522 19 6 13.6438 -4.7434 2.2137 20 9 14.9792 -5.0408 2.5057 21 9 12.8500 -5.0144 3.3334 22 9 13.2157 -5.5282 1.1377 23 6 14.6427 -2.4776 1.8493 24 6 14.5295 -1.1390 1.5223 25 6 13.2967 -0.6111 1.1883 26 6 10.7734 -0.2508 -0.5881 27 6 3.2972 3.6821 0.0065 28 6 3.9775 5.0267 0.0128 29 8 4.5036 5.2882 1.3154 30 14 2.7441 6.3490 -0.4357 31 6 1.9173 3.6065 0.0007 32 6 1.2906 2.3753 0.0000 33 1 -0.3634 -1.0276 -0.0005 34 1 -0.3633 0.5138 0.8901 35 1 -0.3634 0.5139 -0.8899 36 1 4.0196 0.3791 0.0002 37 1 5.8707 0.7877 -0.8868 38 1 5.8692 0.7884 0.8932 39 1 8.1704 -0.2974 0.0046 40 1 9.9393 0.6437 2.2056 41 1 11.5399 1.1414 1.5045 42 1 11.4110 -3.3878 1.5241 43 1 15.6067 -2.8911 2.1066 44 1 15.4051 -0.5068 1.5244 45 1 13.2090 0.4335 0.9284 46 1 11.7435 0.0737 -0.9648 47 1 10.2282 -0.8716 -1.2990 48 1 4.7901 5.0263 -0.7138 49 1 4.9561 6.1393 1.3934 50 1 2.2132 6.1061 -1.8012 51 1 1.6311 6.3598 0.5474 52 1 1.3278 4.5114 0.0007 53 1 0.2120 2.3188 0.0001 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_4974312.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:40 Heat of formation + Delta-G solvation = -194.880738 kcal Electronic energy + Delta-G solvation = -41633.942333 eV Core-core repulsion = 35603.593129 eV Total energy + Delta-G solvation = -6030.349204 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.153 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -51.24128 -48.77087 -48.71136 -41.97727 -41.58429 -40.66090 -39.94989 -38.94068 -38.15902 -37.04281 -34.80867 -32.88146 -32.51040 -32.22917 -31.48748 -29.50874 -28.46265 -27.15683 -26.65069 -26.18557 -26.11901 -23.97557 -23.46320 -22.59795 -22.46740 -21.88460 -20.44016 -19.99106 -19.56724 -19.44067 -19.02408 -18.53610 -18.39779 -17.92535 -17.51911 -17.41590 -17.30241 -16.97655 -16.88202 -16.75748 -16.39209 -16.06197 -15.73347 -15.67072 -15.63964 -15.56210 -15.45261 -15.19770 -15.15676 -14.99734 -14.87762 -14.85756 -14.68220 -14.46583 -14.22441 -14.11429 -13.87828 -13.79869 -13.69030 -13.43386 -13.41695 -13.25085 -13.23666 -12.91516 -12.58427 -12.48448 -12.39932 -12.00979 -11.94103 -11.88019 -11.77763 -11.74814 -11.27535 -11.05209 -10.23474 -10.22041 -10.15160 -9.84291 -9.80172 -9.23767 -4.94524 -0.09106 0.02440 0.15850 0.22593 1.30445 1.36121 1.39388 1.60442 1.63514 1.91883 2.12556 2.39787 2.42568 2.50386 2.67029 2.95015 3.34467 3.42533 3.43396 3.50360 3.56286 3.63674 3.68935 3.83643 3.84566 3.86702 3.92698 3.98858 4.02219 4.07643 4.09100 4.09860 4.18709 4.24143 4.27132 4.31291 4.32485 4.38894 4.51724 4.62810 4.65137 4.68831 4.77436 4.84003 4.87166 4.89818 4.94736 5.02959 5.06954 5.11963 5.12846 5.17047 5.28940 5.31824 5.41582 5.59534 5.77904 6.02004 6.22730 6.40462 6.91372 7.08599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.324 6.324 3 C 0.166 3.834 4 C -0.247 4.247 5 C 0.181 3.819 6 O -0.296 6.296 7 C 0.031 3.969 8 C 0.520 3.480 9 O -0.562 6.562 10 N -0.693 5.693 11 C 0.115 3.885 12 H 0.089 0.911 13 C -0.142 4.142 14 C -0.068 4.068 15 H 0.114 0.886 16 C -0.073 4.073 17 C -0.075 4.075 18 C -0.195 4.195 19 C 0.506 3.494 20 F -0.182 7.182 21 F -0.183 7.183 22 F -0.182 7.182 23 C -0.088 4.088 24 C -0.118 4.118 25 C -0.086 4.086 26 C -0.123 4.123 27 C -0.167 4.167 28 C -0.073 4.073 29 O -0.564 6.564 30 Si 0.778 3.222 31 C -0.057 4.057 32 C -0.241 4.241 33 H 0.122 0.878 34 H 0.065 0.935 35 H 0.067 0.933 36 H 0.163 0.837 37 H 0.125 0.875 38 H 0.120 0.880 39 H 0.420 0.580 40 H 0.068 0.932 41 H 0.103 0.897 42 H 0.140 0.860 43 H 0.142 0.858 44 H 0.156 0.844 45 H 0.152 0.848 46 H 0.106 0.894 47 H 0.090 0.910 48 H 0.067 0.933 49 H 0.396 0.604 50 H -0.285 1.285 51 H -0.281 1.281 52 H 0.134 0.866 53 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.054 0.233 -2.404 2.635 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.237 6.237 3 C 0.120 3.880 4 C -0.266 4.266 5 C 0.135 3.865 6 O -0.208 6.208 7 C -0.047 4.047 8 C 0.306 3.694 9 O -0.440 6.440 10 N -0.347 5.347 11 C 0.010 3.990 12 H 0.107 0.893 13 C -0.181 4.181 14 C -0.086 4.086 15 H 0.132 0.868 16 C -0.073 4.073 17 C -0.094 4.094 18 C -0.196 4.196 19 C 0.452 3.548 20 F -0.163 7.163 21 F -0.165 7.165 22 F -0.164 7.164 23 C -0.106 4.106 24 C -0.136 4.136 25 C -0.103 4.103 26 C -0.160 4.160 27 C -0.168 4.168 28 C -0.181 4.181 29 O -0.373 6.373 30 Si 0.682 3.318 31 C -0.075 4.075 32 C -0.260 4.260 33 H 0.140 0.860 34 H 0.084 0.916 35 H 0.085 0.915 36 H 0.180 0.820 37 H 0.142 0.858 38 H 0.137 0.863 39 H 0.258 0.742 40 H 0.087 0.913 41 H 0.121 0.879 42 H 0.158 0.842 43 H 0.160 0.840 44 H 0.173 0.827 45 H 0.170 0.830 46 H 0.124 0.876 47 H 0.108 0.892 48 H 0.085 0.915 49 H 0.247 0.753 50 H -0.212 1.212 51 H -0.208 1.208 52 H 0.151 0.849 53 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -1.626 0.559 -2.503 3.037 hybrid contribution -0.125 -1.596 0.275 1.624 sum -1.751 -1.037 -2.228 3.017 Atomic orbital electron populations 1.23421 0.76003 1.05953 1.02492 1.86057 1.23736 1.26088 1.87868 1.18815 0.91801 0.84744 0.92668 1.20629 0.93218 0.97636 1.15131 1.18479 0.82130 0.92796 0.93125 1.86195 1.14841 1.31824 1.87952 1.22801 0.88812 0.86410 1.06708 1.20301 0.88151 0.85260 0.75694 1.90762 1.80562 1.23021 1.49647 1.45352 1.05360 1.09453 1.74568 1.21881 0.79110 1.00198 0.97800 0.89321 1.23589 1.01658 0.95574 0.97241 1.21645 0.93847 0.96124 0.96968 0.86838 1.19807 0.96112 0.92417 0.98978 1.20950 0.95965 0.96079 0.96359 1.20002 0.97740 0.91019 1.10823 1.18517 0.73342 0.88571 0.74363 1.93158 1.35142 1.94525 1.93486 1.93212 1.74408 1.95086 1.53770 1.93210 1.89791 1.77483 1.55900 1.21247 0.97869 0.94552 0.96958 1.21472 0.99180 0.94358 0.98547 1.21583 0.91698 1.01172 0.95877 1.23400 1.00989 0.95843 0.95818 1.18937 0.92831 0.93473 1.11546 1.24765 1.04910 0.99793 0.88661 1.86447 1.77493 1.44184 1.29142 0.94143 0.76645 0.84894 0.76150 1.20748 0.92662 0.98198 0.95860 1.21337 1.01586 0.91305 1.11746 0.85975 0.91612 0.91459 0.81968 0.85779 0.86263 0.74219 0.91335 0.87898 0.84212 0.84013 0.82653 0.82999 0.87574 0.89156 0.91461 0.75340 1.21158 1.20785 0.84851 0.82792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.32 -0.91 10.49 -92.41 -0.97 -1.88 16 3 C 0.17 0.81 6.68 22.49 0.15 0.96 16 4 C -0.25 -1.07 8.97 22.46 0.20 -0.87 16 5 C 0.18 1.46 6.66 22.49 0.15 1.61 16 6 O -0.30 -2.47 8.99 -73.43 -0.66 -3.13 16 7 C 0.03 -0.03 5.22 71.24 0.37 0.34 16 8 C 0.52 1.30 7.91 87.66 0.69 1.99 16 9 O -0.56 -7.44 16.10 16.01 0.26 -7.18 16 10 N -0.69 3.62 5.26 -440.03 -2.32 1.30 16 11 C 0.12 -0.53 4.32 45.52 0.20 -0.33 16 12 H 0.09 0.02 7.46 -2.39 -0.02 0.00 16 13 C -0.14 0.81 7.25 31.12 0.23 1.04 16 14 C -0.07 0.54 3.86 -11.01 -0.04 0.50 16 15 H 0.11 -1.16 8.09 -2.39 -0.02 -1.18 16 16 C -0.07 0.34 5.29 -19.86 -0.11 0.23 16 17 C -0.08 0.14 9.26 22.27 0.21 0.34 16 18 C -0.19 -0.17 5.37 -19.86 -0.11 -0.28 16 19 C 0.51 1.82 3.32 71.24 0.24 2.06 16 20 F -0.18 -0.85 15.97 44.97 0.72 -0.14 16 21 F -0.18 -0.97 17.24 44.97 0.78 -0.19 16 22 F -0.18 -0.90 17.24 44.97 0.78 -0.13 16 23 C -0.09 0.11 9.43 22.27 0.21 0.32 16 24 C -0.12 0.53 10.05 22.27 0.22 0.75 16 25 C -0.09 0.47 8.61 22.27 0.19 0.67 16 26 C -0.12 1.07 7.29 31.12 0.23 1.29 16 27 C -0.17 -1.54 5.31 -19.75 -0.10 -1.64 16 28 C -0.07 -0.46 2.36 71.23 0.17 -0.29 16 29 O -0.56 -4.10 12.86 -148.98 -1.92 -6.01 16 30 Si 0.78 0.84 30.18 68.60 2.07 2.91 16 31 C -0.06 -0.40 8.65 22.24 0.19 -0.21 16 32 C -0.24 -1.07 9.04 22.38 0.20 -0.87 16 33 H 0.12 -0.97 8.14 -2.39 -0.02 -0.99 16 34 H 0.07 -0.35 7.66 -2.38 -0.02 -0.37 16 35 H 0.07 -0.38 7.66 -2.39 -0.02 -0.40 16 36 H 0.16 -0.27 6.30 -2.91 -0.02 -0.29 16 37 H 0.12 -0.88 7.66 -2.39 -0.02 -0.90 16 38 H 0.12 -0.71 7.66 -2.39 -0.02 -0.73 16 39 H 0.42 -5.08 8.70 -92.70 -0.81 -5.89 16 40 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.10 -0.69 6.31 -2.39 -0.02 -0.71 16 42 H 0.14 -0.58 8.05 -2.91 -0.02 -0.60 16 43 H 0.14 -0.39 7.16 -2.91 -0.02 -0.41 16 44 H 0.16 -1.37 8.06 -2.91 -0.02 -1.39 16 45 H 0.15 -1.45 6.66 -2.91 -0.02 -1.47 16 46 H 0.11 -0.98 7.72 -2.39 -0.02 -0.99 16 47 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 48 H 0.07 0.44 7.82 -2.39 -0.02 0.42 16 49 H 0.40 -1.06 8.74 -74.06 -0.65 -1.71 16 50 H -0.28 -1.64 7.11 99.48 0.71 -0.93 16 51 H -0.28 -1.60 6.75 99.48 0.67 -0.93 16 52 H 0.13 0.71 4.89 -2.91 -0.01 0.70 16 53 H 0.15 -0.11 6.29 -2.91 -0.02 -0.13 16 Total: 0.00 -28.76 450.19 2.90 -25.86 By element: Atomic # 1 Polarization: -19.64 SS G_CDS: -0.43 Total: -20.07 kcal Atomic # 6 Polarization: 4.07 SS G_CDS: 4.60 Total: 8.67 kcal Atomic # 7 Polarization: 3.62 SS G_CDS: -2.32 Total: 1.30 kcal Atomic # 8 Polarization: -14.92 SS G_CDS: -3.29 Total: -18.21 kcal Atomic # 9 Polarization: -2.72 SS G_CDS: 2.27 Total: -0.45 kcal Atomic # 14 Polarization: 0.84 SS G_CDS: 2.07 Total: 2.91 kcal Total: -28.76 2.90 -25.86 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_4974312.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.026 kcal (2) G-P(sol) polarization free energy of solvation -28.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -197.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.902 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -194.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds