Wall clock time and date at job start Tue Mar 9 2021 13:06:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35987 * 117.00413 * 2 1 4 4 C 1.39153 * 120.07144 * 179.97438 * 3 2 1 5 5 O 1.35992 * 120.07296 * 359.97438 * 4 3 2 6 6 C 1.42907 * 117.00005 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47118 * 180.02562 * 6 5 4 8 8 O 1.21280 * 119.99840 * 359.97438 * 7 6 5 9 9 N 1.34774 * 119.99667 * 180.02562 * 7 6 5 10 10 C 1.46502 * 119.99831 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.85118 * 336.19241 * 10 9 7 12 12 C 1.53778 * 113.61578 * 107.49737 * 10 9 7 13 13 C 1.53781 * 87.08309 * 89.11825 * 12 10 9 14 14 H 1.08998 * 113.68701 * 270.87343 * 13 12 10 15 15 C 1.50699 * 113.61811 * 139.97905 * 13 12 10 16 16 C 1.38212 * 120.00134 * 142.49868 * 15 13 12 17 17 C 1.38244 * 120.00218 * 179.97438 * 16 15 13 18 18 C 1.50707 * 120.00356 * 180.02562 * 17 16 15 19 19 F 1.39898 * 109.47139 * 89.99580 * 18 17 16 20 20 F 1.39902 * 109.47239 * 210.00034 * 18 17 16 21 21 F 1.39905 * 109.46861 * 329.99978 * 18 17 16 22 22 C 1.38214 * 120.00144 * 0.02562 * 17 16 15 23 23 C 1.38260 * 119.99894 * 359.96187 * 22 17 16 24 24 C 1.38208 * 119.99696 * 359.78338 * 23 22 17 25 25 C 1.53778 * 113.61444 * 204.99461 * 10 9 7 26 26 C 1.38563 * 119.85224 * 180.02562 * 4 3 2 27 27 C 1.38245 * 120.00301 * 359.72280 * 26 4 3 28 28 C 1.38261 * 120.14178 * 0.54753 * 27 26 4 29 29 C 1.50699 * 119.92538 * 179.72723 * 28 27 26 30 30 O 1.42892 * 109.47249 * 119.73101 * 29 28 27 31 31 Si 1.86298 * 109.47032 * 359.72486 * 29 28 27 32 32 C 1.38242 * 120.14400 * 359.45608 * 28 27 26 33 33 H 1.08999 * 109.46938 * 300.00589 * 1 2 3 34 34 H 1.09000 * 109.46817 * 59.99582 * 1 2 3 35 35 H 1.08995 * 109.47739 * 179.97438 * 1 2 3 36 36 H 1.09000 * 109.46820 * 300.00532 * 6 5 4 37 37 H 1.08998 * 109.47063 * 60.00104 * 6 5 4 38 38 H 0.97005 * 120.00512 * 359.97438 * 9 7 6 39 39 H 1.09007 * 113.61543 * 203.66332 * 12 10 9 40 40 H 1.08997 * 113.61532 * 334.56658 * 12 10 9 41 41 H 1.08004 * 119.99527 * 0.02562 * 16 15 13 42 42 H 1.08005 * 120.00171 * 179.97438 * 22 17 16 43 43 H 1.07998 * 120.00055 * 180.02562 * 23 22 17 44 44 H 1.07998 * 120.00205 * 180.25490 * 24 23 22 45 45 H 1.08998 * 113.61606 * 25.43652 * 25 10 9 46 46 H 1.09000 * 113.61529 * 156.33373 * 25 10 9 47 47 H 1.08005 * 120.00453 * 179.97438 * 26 4 3 48 48 H 1.07999 * 119.93162 * 180.27366 * 27 26 4 49 49 H 1.09004 * 109.46453 * 239.73169 * 29 28 27 50 50 H 0.96703 * 114.00176 * 299.99748 * 30 29 28 51 51 H 1.48506 * 109.99834 * 58.68765 * 31 29 28 52 52 H 1.48502 * 110.00011 * 180.02562 * 31 29 28 53 53 H 1.08001 * 119.99775 * 180.25292 * 32 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 3.4360 1.2861 0.0005 5 8 4.1795 0.1474 0.0016 6 6 5.6003 0.3002 0.0027 7 6 6.2518 -1.0587 0.0031 8 8 5.5667 -2.0595 0.0030 9 7 7.5956 -1.1617 0.0046 10 6 8.2289 -2.4828 0.0056 11 1 7.5827 -3.2617 0.4105 12 6 8.8787 -2.8555 -1.3374 13 6 10.1590 -2.1825 -0.8150 14 1 10.2168 -1.1175 -1.0397 15 6 11.4205 -2.9253 -1.1725 16 6 12.5648 -2.2246 -1.5037 17 6 13.7222 -2.9060 -1.8311 18 6 14.9702 -2.1420 -2.1916 19 9 15.7188 -1.8992 -1.0350 20 9 15.7333 -2.8932 -3.0919 21 9 14.6170 -0.9241 -2.7826 22 6 13.7349 -4.2881 -1.8279 23 6 12.5903 -4.9891 -1.4964 24 6 11.4347 -4.3078 -1.1639 25 6 9.6461 -2.4861 0.6025 26 6 4.0604 2.5230 0.0011 27 6 3.3032 3.6796 -0.0047 28 6 1.9226 3.6056 0.0004 29 6 1.1020 4.8696 0.0002 30 8 0.2781 4.9025 -1.1668 31 14 2.2370 6.3469 0.0011 32 6 1.2934 2.3747 -0.0001 33 1 -0.3633 0.5139 0.8899 34 1 -0.3633 0.5139 -0.8900 35 1 -0.3634 -1.0276 -0.0005 36 1 5.9073 0.8497 -0.8873 37 1 5.9059 0.8503 0.8927 38 1 8.1435 -0.3612 0.0051 39 1 8.9812 -3.9300 -1.4897 40 1 8.4356 -2.3461 -2.1931 41 1 12.5550 -1.1446 -1.5058 42 1 14.6390 -4.8205 -2.0841 43 1 12.6002 -6.0691 -1.4935 44 1 10.5416 -4.8553 -0.9010 45 1 9.8225 -1.6785 1.3131 46 1 9.9583 -3.4595 0.9807 47 1 5.1388 2.5837 0.0019 48 1 3.7911 4.6431 -0.0088 49 1 0.4729 4.8943 0.8901 50 1 0.7722 4.8830 -1.9978 51 1 3.1221 6.3080 -1.1908 52 1 1.4399 7.5998 0.0016 53 1 0.2148 2.3197 -0.0002 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_60476.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:49 Heat of formation + Delta-G solvation = -196.318053 kcal Electronic energy + Delta-G solvation = -41235.179688 eV Core-core repulsion = 35204.768157 eV Total energy + Delta-G solvation = -6030.411531 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.153 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -51.22442 -48.74928 -48.69937 -41.88431 -41.54593 -40.57496 -39.51163 -38.99099 -38.65487 -37.01854 -34.78382 -32.86904 -32.29408 -31.91208 -31.43141 -29.52185 -28.45455 -27.14096 -26.63717 -26.37338 -25.97291 -23.69434 -23.42772 -22.74197 -22.44010 -21.80710 -20.41541 -19.81432 -19.55795 -19.41741 -18.99130 -18.58145 -18.36814 -17.96193 -17.52631 -17.33363 -17.21476 -16.90037 -16.67313 -16.40435 -16.14210 -16.03935 -15.84165 -15.81411 -15.61874 -15.55150 -15.40969 -15.33483 -15.16068 -14.97584 -14.86208 -14.79452 -14.68390 -14.47788 -14.31646 -14.20504 -13.77828 -13.73855 -13.58539 -13.50329 -13.38850 -13.20256 -12.92518 -12.60628 -12.57713 -12.39429 -12.16988 -12.15739 -11.99358 -11.87150 -11.75715 -11.64394 -11.25869 -11.00228 -10.62344 -10.22273 -10.12939 -9.78885 -9.77603 -8.91233 -4.88466 -0.08285 0.17301 0.23584 0.28572 1.33738 1.44982 1.47980 1.61788 1.64167 2.00156 2.31328 2.43378 2.56326 2.57356 2.68384 2.96314 3.35775 3.40130 3.45088 3.52920 3.65427 3.65926 3.70791 3.85148 3.86931 3.91705 3.95332 4.05895 4.07769 4.11103 4.13872 4.15189 4.25188 4.29032 4.30719 4.36902 4.39862 4.57429 4.63700 4.65969 4.66352 4.67421 4.78598 4.85793 4.90825 4.96983 5.01451 5.04164 5.13198 5.13916 5.17992 5.32249 5.37472 5.43097 5.59180 5.62360 5.78581 5.97437 6.41986 6.49079 6.54957 7.15377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.335 6.335 3 C 0.077 3.923 4 C 0.085 3.915 5 O -0.314 6.314 6 C 0.034 3.966 7 C 0.515 3.485 8 O -0.572 6.572 9 N -0.692 5.692 10 C 0.114 3.886 11 H 0.084 0.916 12 C -0.143 4.143 13 C -0.066 4.066 14 H 0.118 0.882 15 C -0.073 4.073 16 C -0.075 4.075 17 C -0.194 4.194 18 C 0.506 3.494 19 F -0.183 7.183 20 F -0.183 7.183 21 F -0.181 7.181 22 C -0.087 4.087 23 C -0.119 4.119 24 C -0.087 4.087 25 C -0.122 4.122 26 C -0.159 4.159 27 C -0.110 4.110 28 C -0.116 4.116 29 C -0.085 4.085 30 O -0.551 6.551 31 Si 0.776 3.224 32 C -0.153 4.153 33 H 0.065 0.935 34 H 0.061 0.939 35 H 0.111 0.889 36 H 0.126 0.874 37 H 0.130 0.870 38 H 0.422 0.578 39 H 0.099 0.901 40 H 0.069 0.931 41 H 0.144 0.856 42 H 0.139 0.861 43 H 0.154 0.846 44 H 0.151 0.849 45 H 0.093 0.907 46 H 0.103 0.897 47 H 0.177 0.823 48 H 0.159 0.841 49 H 0.122 0.878 50 H 0.386 0.614 51 H -0.276 1.276 52 H -0.307 1.307 53 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.079 2.980 2.832 5.137 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.031 3.969 4 C 0.040 3.960 5 O -0.228 6.228 6 C -0.044 4.044 7 C 0.302 3.698 8 O -0.450 6.450 9 N -0.346 5.346 10 C 0.009 3.991 11 H 0.102 0.898 12 C -0.182 4.182 13 C -0.084 4.084 14 H 0.136 0.864 15 C -0.073 4.073 16 C -0.093 4.093 17 C -0.196 4.196 18 C 0.452 3.548 19 F -0.165 7.165 20 F -0.164 7.164 21 F -0.162 7.162 22 C -0.105 4.105 23 C -0.136 4.136 24 C -0.104 4.104 25 C -0.160 4.160 26 C -0.177 4.177 27 C -0.127 4.127 28 C -0.117 4.117 29 C -0.193 4.193 30 O -0.359 6.359 31 Si 0.681 3.319 32 C -0.171 4.171 33 H 0.084 0.916 34 H 0.080 0.920 35 H 0.129 0.871 36 H 0.144 0.856 37 H 0.148 0.852 38 H 0.260 0.740 39 H 0.118 0.882 40 H 0.088 0.912 41 H 0.162 0.838 42 H 0.157 0.843 43 H 0.172 0.828 44 H 0.168 0.832 45 H 0.111 0.889 46 H 0.122 0.878 47 H 0.194 0.806 48 H 0.176 0.824 49 H 0.140 0.860 50 H 0.235 0.765 51 H -0.202 1.202 52 H -0.236 1.236 53 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.422 2.611 2.853 4.563 hybrid contribution -0.120 0.007 -1.407 1.412 sum 2.302 2.618 1.446 3.774 Atomic orbital electron populations 1.23278 0.76835 1.05198 1.02067 1.86186 1.22970 1.26661 1.89095 1.18668 0.89941 0.85579 1.02693 1.18584 0.88170 0.86552 1.02702 1.86223 1.18257 1.29025 1.89286 1.22790 0.79336 0.95173 1.07108 1.20552 0.82997 0.90813 0.75485 1.90777 1.64090 1.40189 1.49903 1.45332 1.05004 1.09697 1.74571 1.21861 0.94237 0.85267 0.97783 0.89814 1.23585 0.95074 1.02207 0.97297 1.21646 0.89659 1.00240 0.96847 0.86444 1.19819 0.94670 0.93887 0.98927 1.21006 0.90989 1.01107 0.96214 1.20004 0.93257 0.95431 1.10877 1.18515 0.84462 0.77471 0.74321 1.93220 1.78862 1.94622 1.49774 1.93185 1.78194 1.76232 1.68837 1.93184 1.91864 1.46702 1.84490 1.21179 1.00379 0.91987 0.96941 1.21448 0.91884 1.01682 0.98620 1.21578 0.98974 0.93942 0.95944 1.23392 0.92136 1.04586 0.95913 1.21382 1.02290 0.89272 1.04790 1.21016 0.92380 0.99043 1.00302 1.20129 0.94482 0.94673 1.02423 1.25313 1.00691 1.02322 0.90975 1.86564 1.36805 1.95818 1.16690 0.94023 0.78047 0.72318 0.87511 1.21004 1.00503 0.90566 1.05063 0.91615 0.91990 0.87079 0.85593 0.85198 0.73979 0.88220 0.91239 0.83820 0.84268 0.82805 0.83184 0.88893 0.87842 0.80602 0.82410 0.85973 0.76472 1.20192 1.23596 0.84177 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.04 9.81 113.37 1.11 1.16 16 2 O -0.33 -3.56 10.28 -79.53 -0.82 -4.37 16 3 C 0.08 0.57 6.70 22.57 0.15 0.72 16 4 C 0.09 0.40 6.70 22.57 0.15 0.55 16 5 O -0.31 -2.34 9.45 -67.05 -0.63 -2.97 16 6 C 0.03 -0.13 5.22 71.23 0.37 0.24 16 7 C 0.52 0.90 7.91 87.66 0.69 1.60 16 8 O -0.57 -8.23 16.10 16.01 0.26 -7.97 16 9 N -0.69 4.44 5.26 -440.05 -2.32 2.12 16 10 C 0.11 -0.55 4.32 45.52 0.20 -0.36 16 11 H 0.08 0.07 7.46 -2.39 -0.02 0.05 16 12 C -0.14 0.87 7.25 31.12 0.23 1.09 16 13 C -0.07 0.58 3.86 -11.01 -0.04 0.54 16 14 H 0.12 -1.39 8.09 -2.39 -0.02 -1.41 16 15 C -0.07 0.38 5.29 -19.87 -0.11 0.28 16 16 C -0.08 0.20 9.06 22.26 0.20 0.40 16 17 C -0.19 -0.05 5.45 -19.87 -0.11 -0.16 16 18 C 0.51 1.48 3.36 71.24 0.24 1.72 16 19 F -0.18 -0.86 17.30 44.97 0.78 -0.09 16 20 F -0.18 -0.83 16.46 44.97 0.74 -0.09 16 21 F -0.18 -0.65 16.46 44.97 0.74 0.09 16 22 C -0.09 0.13 9.40 22.27 0.21 0.34 16 23 C -0.12 0.54 10.05 22.27 0.22 0.77 16 24 C -0.09 0.49 8.60 22.27 0.19 0.69 16 25 C -0.12 1.14 7.29 31.12 0.23 1.36 16 26 C -0.16 0.55 9.04 22.35 0.20 0.76 16 27 C -0.11 0.43 8.66 22.28 0.19 0.63 16 28 C -0.12 0.06 5.39 -19.86 -0.11 -0.05 16 29 C -0.08 0.15 2.82 71.24 0.20 0.35 16 30 O -0.55 -0.98 12.77 -148.98 -1.90 -2.88 16 31 Si 0.78 -3.36 29.78 68.60 2.04 -1.31 16 32 C -0.15 -0.50 8.60 22.35 0.19 -0.31 16 33 H 0.07 -0.03 7.66 -2.39 -0.02 -0.05 16 34 H 0.06 0.02 7.66 -2.39 -0.02 0.00 16 35 H 0.11 -0.06 8.14 -2.39 -0.02 -0.08 16 36 H 0.13 -1.36 7.66 -2.39 -0.02 -1.37 16 37 H 0.13 -1.46 7.66 -2.39 -0.02 -1.48 16 38 H 0.42 -6.03 8.70 -92.70 -0.81 -6.83 16 39 H 0.10 -0.65 6.32 -2.38 -0.02 -0.67 16 40 H 0.07 -0.28 8.14 -2.39 -0.02 -0.29 16 41 H 0.14 -0.76 7.60 -2.91 -0.02 -0.78 16 42 H 0.14 -0.43 7.60 -2.91 -0.02 -0.46 16 43 H 0.15 -1.34 8.06 -2.91 -0.02 -1.36 16 44 H 0.15 -1.41 6.68 -2.91 -0.02 -1.42 16 45 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 46 H 0.10 -0.96 7.71 -2.39 -0.02 -0.98 16 47 H 0.18 -2.10 6.30 -2.91 -0.02 -2.12 16 48 H 0.16 -1.50 4.87 -2.91 -0.01 -1.52 16 49 H 0.12 -0.35 7.96 -2.38 -0.02 -0.37 16 50 H 0.39 -1.44 8.70 -74.06 -0.64 -2.09 16 51 H -0.28 0.42 7.11 99.48 0.71 1.13 16 52 H -0.31 -1.29 7.11 99.48 0.71 -0.58 16 53 H 0.14 0.29 6.30 -2.91 -0.02 0.27 16 Total: 0.00 -31.75 450.31 3.11 -28.64 By element: Atomic # 1 Polarization: -23.08 SS G_CDS: -0.40 Total: -23.47 kcal Atomic # 6 Polarization: 7.70 SS G_CDS: 4.62 Total: 12.32 kcal Atomic # 7 Polarization: 4.44 SS G_CDS: -2.32 Total: 2.12 kcal Atomic # 8 Polarization: -15.11 SS G_CDS: -3.10 Total: -18.20 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 2.26 Total: -0.09 kcal Atomic # 14 Polarization: -3.36 SS G_CDS: 2.04 Total: -1.31 kcal Total: -31.75 3.11 -28.64 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_60476.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.680 kcal (2) G-P(sol) polarization free energy of solvation -31.753 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -199.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.115 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.638 kcal (6) G-S(sol) free energy of system = (1) + (5) -196.318 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds