Wall clock time and date at job start Tue Mar 9 2021 13:07:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.35453 * 125.56391 * 2 1 4 4 C 1.50696 * 126.07033 * 359.97438 * 3 2 1 5 5 O 1.42891 * 109.47616 * 111.94184 * 4 3 2 6 6 Si 1.86298 * 109.47050 * 231.94393 * 4 3 2 7 7 C 1.39833 * 107.86415 * 179.97438 * 3 2 1 8 8 C 1.50701 * 126.45816 * 180.26449 * 7 3 2 9 9 C 1.37869 * 107.08639 * 0.02562 * 7 3 2 10 10 C 1.46680 * 126.23489 * 179.97438 * 9 7 3 11 11 O 1.21689 * 120.00118 * 359.97438 * 10 9 7 12 12 N 1.34778 * 119.99825 * 180.02562 * 10 9 7 13 13 C 1.46505 * 119.99525 * 180.02562 * 12 10 9 14 14 H 1.08997 * 112.85034 * 336.18875 * 13 12 10 15 15 C 1.53777 * 113.61339 * 107.50300 * 13 12 10 16 16 C 1.53783 * 87.08555 * 89.11422 * 15 13 12 17 17 H 1.09004 * 113.68618 * 270.87441 * 16 15 13 18 18 C 1.50700 * 113.61947 * 139.97847 * 16 15 13 19 19 C 1.38209 * 119.97223 * 322.22723 * 18 16 15 20 20 C 1.38474 * 120.02096 * 179.76315 * 19 18 16 21 21 F 1.35098 * 120.01218 * 180.24978 * 20 19 18 22 22 C 1.38418 * 119.97514 * 0.53346 * 20 19 18 23 23 C 1.38419 * 119.94882 * 359.72287 * 22 20 19 24 24 F 1.35099 * 120.01049 * 180.02562 * 23 22 20 25 25 C 1.38201 * 119.97336 * 142.50091 * 18 16 15 26 26 C 1.53783 * 87.08118 * 25.42878 * 16 15 13 27 27 N 1.35531 * 125.56196 * 179.97438 * 2 1 3 28 28 H 1.09002 * 109.46553 * 275.30931 * 1 2 3 29 29 H 1.08998 * 109.46884 * 35.30129 * 1 2 3 30 30 H 1.08991 * 109.47252 * 155.30412 * 1 2 3 31 31 H 1.09007 * 109.46814 * 351.93633 * 4 3 2 32 32 H 0.96701 * 114.00500 * 59.99855 * 5 4 3 33 33 H 1.48504 * 110.00117 * 65.09174 * 6 4 3 34 34 H 1.48501 * 110.00329 * 186.40941 * 6 4 3 35 35 H 1.09007 * 109.46861 * 269.70987 * 8 7 3 36 36 H 1.08995 * 109.47161 * 29.71129 * 8 7 3 37 37 H 1.09006 * 109.47386 * 149.71643 * 8 7 3 38 38 H 0.96999 * 120.00580 * 359.97438 * 12 10 9 39 39 H 1.09005 * 113.61510 * 203.65805 * 15 13 12 40 40 H 1.08995 * 113.61608 * 334.56099 * 15 13 12 41 41 H 1.07998 * 119.98532 * 0.02562 * 19 18 16 42 42 H 1.08000 * 120.02334 * 179.69908 * 22 20 19 43 43 H 1.07997 * 119.99280 * 359.97438 * 25 18 16 44 44 H 1.08994 * 113.61532 * 220.02066 * 26 16 15 45 45 H 1.09006 * 113.61239 * 89.11715 * 26 16 15 46 46 H 0.96997 * 125.68099 * 0.02562 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8200 2.5321 -0.0005 5 8 2.1472 3.1432 1.2490 6 14 2.6524 3.4622 -1.3835 7 6 3.6270 0.6767 0.0006 8 6 4.8486 1.5592 0.0064 9 6 3.6122 -0.7019 0.0004 10 6 4.7860 -1.5815 0.0003 11 8 5.9049 -1.1031 -0.0001 12 7 4.6252 -2.9197 -0.0005 13 6 5.7976 -3.7982 0.0000 14 1 6.6877 -3.3164 -0.4046 15 6 6.0354 -4.5073 1.3436 16 6 5.1263 -5.6323 0.8213 17 1 4.0702 -5.4814 1.0450 18 6 5.6088 -7.0142 1.1800 19 6 6.9617 -7.2968 1.1724 20 6 7.4065 -8.5648 1.5067 21 9 8.7293 -8.8395 1.5040 22 6 6.4950 -9.5525 1.8377 23 6 5.1400 -9.2697 1.8399 24 9 4.2493 -10.2326 2.1633 25 6 4.6978 -7.9994 1.5109 26 6 5.5251 -5.1893 -0.5963 27 7 2.2952 -1.1025 0.0005 28 1 -0.3632 0.0951 1.0233 29 1 -0.3633 0.8387 -0.5939 30 1 -0.3633 -0.9336 -0.4293 31 1 0.7398 2.5562 -0.1451 32 1 3.0942 3.1571 1.4441 33 1 2.2231 2.9137 -2.6951 34 1 2.3133 4.9056 -1.3012 35 1 5.1480 1.7719 -1.0199 36 1 4.6196 2.4933 0.5192 37 1 5.6619 1.0504 0.5240 38 1 3.7334 -3.3011 -0.0006 39 1 7.0692 -4.8172 1.4969 40 1 5.6215 -3.9730 2.1986 41 1 7.6724 -6.5272 0.9098 42 1 6.8408 -10.5431 2.0938 43 1 3.6407 -7.7785 1.5126 44 1 4.6992 -5.2055 -1.3074 45 1 6.4194 -5.6855 -0.9735 46 1 1.9833 -2.0210 0.0006 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:57 Heat of formation + Delta-G solvation = -65.555486 kcal Electronic energy + Delta-G solvation = -31642.096804 eV Core-core repulsion = 26942.511772 eV Total energy + Delta-G solvation = -4699.585032 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.143 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -50.07354 -50.05008 -42.73620 -41.62809 -40.05078 -38.65517 -37.71485 -34.86264 -33.77272 -33.00118 -31.98359 -31.43935 -29.32919 -27.83821 -26.98960 -26.76617 -26.03825 -24.06497 -23.29911 -22.59849 -21.02320 -20.66467 -20.08538 -19.50824 -18.93022 -18.18753 -17.65791 -17.57139 -17.19086 -17.05893 -16.85468 -16.75010 -16.46048 -16.35542 -16.10828 -15.73401 -15.39846 -15.30814 -15.25332 -15.15888 -14.64402 -14.33508 -14.25764 -14.06779 -13.93826 -13.82000 -13.74696 -13.72073 -13.29919 -13.22885 -13.18937 -13.01640 -12.88600 -12.72096 -12.31505 -12.18529 -11.93881 -11.90988 -11.54391 -10.99861 -10.49873 -10.29684 -10.02405 -9.89491 -9.57852 -9.03182 -4.84830 -0.20751 -0.17886 0.35705 1.25453 1.57969 1.81011 1.85175 1.93740 2.11226 2.13955 2.29816 2.69630 3.08577 3.21081 3.36830 3.40745 3.60075 3.61942 3.65260 3.69400 3.72533 3.77236 3.83636 3.93446 3.94578 4.00465 4.27318 4.35131 4.36632 4.44560 4.47086 4.51292 4.54186 4.57798 4.63611 4.67532 4.75886 4.77164 4.82481 4.86520 4.87720 4.89307 4.96584 5.11140 5.15331 5.31122 5.39989 5.61282 5.65820 5.87113 6.20629 6.37230 6.68798 7.07796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.081 3.919 3 C -0.208 4.208 4 C -0.028 4.028 5 O -0.542 6.542 6 Si 0.675 3.325 7 C -0.055 4.055 8 C -0.099 4.099 9 C -0.062 4.062 10 C 0.595 3.405 11 O -0.518 6.518 12 N -0.718 5.718 13 C 0.123 3.877 14 H 0.112 0.888 15 C -0.144 4.144 16 C -0.077 4.077 17 H 0.103 0.897 18 C -0.013 4.013 19 C -0.163 4.163 20 C 0.137 3.863 21 F -0.128 7.128 22 C -0.197 4.197 23 C 0.136 3.864 24 F -0.129 7.129 25 C -0.162 4.162 26 C -0.135 4.135 27 N -0.537 5.537 28 H 0.083 0.917 29 H 0.084 0.916 30 H 0.069 0.931 31 H 0.109 0.891 32 H 0.375 0.625 33 H -0.258 1.258 34 H -0.252 1.252 35 H 0.079 0.921 36 H 0.065 0.935 37 H 0.091 0.909 38 H 0.394 0.606 39 H 0.099 0.901 40 H 0.079 0.921 41 H 0.145 0.855 42 H 0.149 0.851 43 H 0.142 0.858 44 H 0.080 0.920 45 H 0.103 0.897 46 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.082 -1.462 -1.063 2.757 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.037 4.037 3 C -0.214 4.214 4 C -0.140 4.140 5 O -0.348 6.348 6 Si 0.576 3.424 7 C -0.064 4.064 8 C -0.156 4.156 9 C -0.173 4.173 10 C 0.384 3.616 11 O -0.393 6.393 12 N -0.369 5.369 13 C 0.018 3.982 14 H 0.130 0.870 15 C -0.182 4.182 16 C -0.095 4.095 17 H 0.121 0.879 18 C -0.013 4.013 19 C -0.182 4.182 20 C 0.118 3.882 21 F -0.107 7.107 22 C -0.217 4.217 23 C 0.116 3.884 24 F -0.108 7.108 25 C -0.181 4.181 26 C -0.173 4.173 27 N -0.135 5.135 28 H 0.101 0.899 29 H 0.103 0.897 30 H 0.088 0.912 31 H 0.126 0.874 32 H 0.223 0.777 33 H -0.182 1.182 34 H -0.177 1.177 35 H 0.098 0.902 36 H 0.084 0.916 37 H 0.110 0.890 38 H 0.227 0.773 39 H 0.118 0.882 40 H 0.098 0.902 41 H 0.163 0.837 42 H 0.167 0.833 43 H 0.160 0.840 44 H 0.098 0.902 45 H 0.121 0.879 46 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -1.982 -0.746 -1.754 2.750 hybrid contribution -1.182 -1.625 0.384 2.046 sum -3.164 -2.371 -1.370 4.185 Atomic orbital electron populations 1.20495 0.87441 1.03627 1.03773 1.20313 0.93580 0.85579 1.04225 1.19492 0.92585 0.95055 1.14308 1.24280 1.03296 0.91375 0.95049 1.86499 1.29771 1.80753 1.37774 0.94632 0.91964 0.78947 0.76838 1.19754 0.94595 0.91185 1.00878 1.20440 0.94680 0.97334 1.03134 1.19980 0.82688 0.93931 1.20705 1.16977 0.87585 0.81067 0.75967 1.90843 1.24058 1.74809 1.49625 1.45548 1.09067 1.05677 1.76573 1.21837 0.89810 0.89783 0.96817 0.86991 1.23602 1.00750 0.95659 0.98195 1.21688 1.00444 0.89995 0.97390 0.87895 1.19295 0.91757 0.94950 0.95320 1.21069 0.96613 0.95925 1.04571 1.17249 0.77775 0.93489 0.99721 1.91568 1.31067 1.94258 1.93773 1.21100 0.91738 1.01574 1.07264 1.17278 0.86129 0.86090 0.98900 1.91563 1.67145 1.62206 1.89852 1.21103 1.01416 0.91503 1.04055 1.23460 1.03355 0.94964 0.95528 1.41818 1.05428 1.08282 1.57938 0.89874 0.89715 0.91192 0.87392 0.77689 1.18246 1.17690 0.90211 0.91596 0.89044 0.77264 0.88243 0.90245 0.83701 0.83285 0.84030 0.90182 0.87896 0.74812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.28 10.00 36.01 0.36 0.64 16 2 C 0.08 -0.06 7.13 -81.95 -0.58 -0.64 16 3 C -0.21 -0.11 4.72 -105.02 -0.50 -0.60 16 4 C -0.03 -0.01 2.86 36.00 0.10 0.09 16 5 O -0.54 -0.68 12.88 -35.23 -0.45 -1.14 16 6 Si 0.67 0.18 29.58 -169.99 -5.03 -4.84 16 7 C -0.06 -0.04 5.83 -104.16 -0.61 -0.65 16 8 C -0.10 0.06 7.97 36.01 0.29 0.35 16 9 C -0.06 -0.02 7.06 -81.98 -0.58 -0.60 16 10 C 0.60 0.45 7.79 -12.85 -0.10 0.35 16 11 O -0.52 -2.00 14.41 5.20 0.07 -1.92 16 12 N -0.72 1.77 5.26 -54.32 -0.29 1.49 16 13 C 0.12 -0.32 4.33 -67.11 -0.29 -0.61 16 14 H 0.11 -0.11 7.46 -51.93 -0.39 -0.50 16 15 C -0.14 0.43 7.25 -25.92 -0.19 0.24 16 16 C -0.08 0.30 3.86 -90.96 -0.35 -0.05 16 17 H 0.10 -0.52 8.09 -51.93 -0.42 -0.94 16 18 C -0.01 0.03 5.29 -104.65 -0.55 -0.53 16 19 C -0.16 0.24 8.57 -39.50 -0.34 -0.10 16 20 C 0.14 0.02 7.30 -39.43 -0.29 -0.26 16 21 F -0.13 -0.19 17.27 2.25 0.04 -0.15 16 22 C -0.20 -0.02 10.01 -39.45 -0.39 -0.42 16 23 C 0.14 0.03 7.30 -39.43 -0.29 -0.26 16 24 F -0.13 -0.19 17.27 2.25 0.04 -0.15 16 25 C -0.16 0.23 9.69 -39.51 -0.38 -0.15 16 26 C -0.14 0.55 7.29 -25.91 -0.19 0.36 16 27 N -0.54 1.07 5.99 -5.69 -0.03 1.03 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.08 -0.26 7.22 -51.93 -0.38 -0.63 16 30 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 31 H 0.11 0.01 6.65 -51.92 -0.35 -0.34 16 32 H 0.38 -0.70 6.89 45.56 0.31 -0.39 16 33 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 34 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 35 H 0.08 -0.10 7.66 -51.93 -0.40 -0.50 16 36 H 0.07 -0.20 5.28 -51.93 -0.27 -0.47 16 37 H 0.09 0.08 6.50 -51.93 -0.34 -0.26 16 38 H 0.39 -1.99 7.83 -40.82 -0.32 -2.31 16 39 H 0.10 -0.32 6.32 -51.93 -0.33 -0.65 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 41 H 0.15 -0.43 6.67 -52.49 -0.35 -0.78 16 42 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 43 H 0.14 -0.44 8.05 -52.49 -0.42 -0.87 16 44 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 45 H 0.10 -0.42 7.71 -51.93 -0.40 -0.82 16 46 H 0.41 -2.15 8.19 -40.82 -0.33 -2.48 16 LS Contribution 382.24 15.07 5.76 5.76 Total: 0.00 -8.25 382.24 -10.46 -18.71 By element: Atomic # 1 Polarization: -10.26 SS G_CDS: -5.69 Total: -15.95 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -4.88 Total: -2.84 kcal Atomic # 7 Polarization: 2.84 SS G_CDS: -0.32 Total: 2.52 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -0.38 Total: -3.06 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.08 Total: -0.30 kcal Atomic # 14 Polarization: 0.18 SS G_CDS: -5.03 Total: -4.84 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -8.25 -10.46 -18.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.848 kcal (2) G-P(sol) polarization free energy of solvation -8.251 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.457 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.708 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.555 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds