Wall clock time and date at job start Tue Mar 9 2021 13:08:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86293 * 109.47297 * 2 1 4 4 C 1.50701 * 109.47105 * 119.99958 * 2 1 3 5 5 C 1.34461 * 126.48357 * 255.02687 * 4 2 1 6 6 N 1.36557 * 109.98494 * 179.97438 * 5 4 2 7 7 C 1.37826 * 109.86605 * 0.02562 * 6 5 4 8 8 C 1.38647 * 133.38595 * 180.35567 * 7 6 5 9 9 C 1.39314 * 119.66840 * 180.17416 * 8 7 6 10 10 C 1.47578 * 119.83397 * 179.72574 * 9 8 7 11 11 O 1.21588 * 119.99806 * 359.72375 * 10 9 8 12 12 N 1.34766 * 120.00213 * 179.72421 * 10 9 8 13 13 C 1.46500 * 120.00324 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.90701 * 336.25546 * 13 12 10 15 15 C 1.53786 * 113.61441 * 107.50498 * 13 12 10 16 16 C 1.53779 * 87.07997 * 89.11741 * 15 13 12 17 17 H 1.08997 * 113.69165 * 270.86831 * 16 15 13 18 18 C 1.50706 * 113.60955 * 139.98049 * 16 15 13 19 19 C 1.38199 * 119.97576 * 322.22697 * 18 16 15 20 20 C 1.38480 * 120.02465 * 179.76737 * 19 18 16 21 21 F 1.35095 * 120.01421 * 180.24553 * 20 19 18 22 22 C 1.38417 * 119.97021 * 0.48631 * 20 19 18 23 23 C 1.38420 * 119.95392 * 359.76641 * 22 20 19 24 24 F 1.35097 * 120.01298 * 180.02562 * 23 22 20 25 25 C 1.38207 * 119.97093 * 142.49999 * 18 16 15 26 26 C 1.53781 * 87.08357 * 25.43165 * 16 15 13 27 27 C 1.40204 * 120.33513 * 359.44879 * 9 8 7 28 28 C 1.36236 * 120.37869 * 0.25128 * 27 9 8 29 29 C 1.39880 * 119.95563 * 0.02872 * 28 27 9 30 30 H 0.96705 * 114.00458 * 300.00108 * 1 2 3 31 31 H 1.09001 * 109.47541 * 239.99276 * 2 1 3 32 32 H 1.48498 * 110.00115 * 178.67934 * 3 2 1 33 33 H 1.48506 * 109.99924 * 299.99950 * 3 2 1 34 34 H 1.08000 * 125.00300 * 359.95585 * 5 4 2 35 35 H 0.97001 * 125.06378 * 179.97438 * 6 5 4 36 36 H 1.08005 * 120.16562 * 359.89868 * 8 7 6 37 37 H 0.97006 * 120.00111 * 0.02562 * 12 10 9 38 38 H 1.08997 * 113.61318 * 334.56902 * 15 13 12 39 39 H 1.09001 * 113.61119 * 203.66602 * 15 13 12 40 40 H 1.07995 * 119.99098 * 359.97438 * 19 18 16 41 41 H 1.08002 * 120.02505 * 179.78937 * 22 20 19 42 42 H 1.08002 * 119.99155 * 359.97438 * 25 18 16 43 43 H 1.09001 * 113.61397 * 89.11508 * 26 16 15 44 44 H 1.08994 * 113.61764 * 220.01390 * 26 16 15 45 45 H 1.07999 * 119.80842 * 180.27576 * 27 9 8 46 46 H 1.08000 * 120.02010 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4611 -0.1363 2.3248 6 7 2.8026 -1.0946 3.2357 7 6 2.4946 -2.3431 2.7398 8 6 2.6253 -3.6275 3.2453 9 6 2.2136 -4.7155 2.4788 10 6 2.3566 -6.0846 3.0108 11 8 2.8375 -6.2611 4.1135 12 7 1.9543 -7.1392 2.2744 13 6 2.0969 -8.4983 2.8023 14 1 2.8748 -8.5792 3.5614 15 6 0.7627 -9.1413 3.2166 16 6 0.6529 -9.6568 1.7719 17 1 0.1520 -8.9633 1.0964 18 6 0.1168 -11.0617 1.6714 19 6 0.4808 -12.0084 2.6101 20 6 -0.0150 -13.2984 2.5215 21 9 0.3371 -14.2223 3.4420 22 6 -0.8674 -13.6419 1.4865 23 6 -1.2272 -12.6943 0.5439 24 9 -2.0595 -13.0282 -0.4665 25 6 -0.7340 -11.4037 0.6373 26 6 2.1874 -9.5770 1.7101 27 6 1.6587 -4.5160 1.2068 28 6 1.5209 -3.2570 0.7049 29 6 1.9350 -2.1548 1.4602 30 1 -0.3934 0.4417 0.7650 31 1 1.7924 -0.5139 -0.8899 32 1 3.5345 1.7702 0.0322 33 1 1.5615 2.4678 -1.2085 34 1 2.5969 0.9262 2.4628 35 1 3.2029 -0.9223 4.1023 36 1 3.0483 -3.7841 4.2267 37 1 1.5711 -6.9984 1.3945 38 1 -0.0074 -8.4169 3.4814 39 1 0.8715 -9.9346 3.9561 40 1 1.1495 -11.7413 3.4149 41 1 -1.2519 -14.6486 1.4146 42 1 -1.0146 -10.6641 -0.0980 43 1 2.6856 -10.4895 2.0378 44 1 2.5673 -9.2045 0.7588 45 1 1.3382 -5.3653 0.6216 46 1 1.0931 -3.1100 -0.2758 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:11 Heat of formation + Delta-G solvation = -37.551605 kcal Electronic energy + Delta-G solvation = -33186.755982 eV Core-core repulsion = 28259.244486 eV Total energy + Delta-G solvation = -4927.511495 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.128 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -50.08448 -50.06136 -42.44808 -41.61514 -40.38910 -38.73617 -37.82090 -37.41213 -34.65604 -33.22375 -32.07746 -31.36698 -30.70346 -30.42110 -26.78135 -26.70789 -26.36344 -24.78598 -23.91412 -23.62855 -22.92803 -21.63390 -20.77768 -20.39163 -19.44801 -18.92903 -18.29041 -18.12508 -17.58146 -17.41802 -17.15412 -17.05441 -16.93361 -16.74266 -16.38032 -16.24359 -16.06318 -15.85886 -15.67773 -15.49030 -15.35601 -15.09145 -14.98696 -14.72748 -14.68655 -14.29261 -14.05858 -14.00495 -13.71596 -13.49313 -13.08640 -13.06107 -12.94268 -12.80234 -12.60883 -12.27357 -12.26710 -12.08599 -11.91514 -11.70198 -11.31127 -11.12704 -10.76715 -10.28145 -10.15521 -9.90822 -9.81719 -9.34655 -8.77108 -4.96387 -0.31036 -0.10753 -0.09003 0.38705 1.40000 1.43436 1.72238 1.90514 1.91509 2.06531 2.24863 2.26325 2.77078 2.87686 3.25772 3.37994 3.55781 3.60140 3.64626 3.68378 3.75519 3.77390 3.90213 3.91409 3.92268 3.94512 4.06886 4.11069 4.14884 4.32201 4.50686 4.52937 4.60300 4.60860 4.72306 4.74543 4.77387 4.78172 4.80125 4.87431 4.96846 4.97486 4.97740 5.04413 5.12900 5.22851 5.32313 5.42927 5.51085 5.60471 5.63490 5.71228 5.99825 6.46956 6.56176 6.91896 7.14688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.038 4.038 3 Si 0.792 3.208 4 C -0.235 4.235 5 C 0.096 3.904 6 N -0.578 5.578 7 C 0.066 3.934 8 C -0.067 4.067 9 C -0.137 4.137 10 C 0.565 3.435 11 O -0.581 6.581 12 N -0.694 5.694 13 C 0.113 3.887 14 H 0.089 0.911 15 C -0.143 4.143 16 C -0.067 4.067 17 H 0.125 0.875 18 C -0.009 4.009 19 C -0.159 4.159 20 C 0.118 3.882 21 F -0.141 7.141 22 C -0.205 4.205 23 C 0.118 3.882 24 F -0.140 7.140 25 C -0.155 4.155 26 C -0.124 4.124 27 C -0.106 4.106 28 C -0.087 4.087 29 C -0.082 4.082 30 H 0.393 0.607 31 H 0.097 0.903 32 H -0.285 1.285 33 H -0.306 1.306 34 H 0.218 0.782 35 H 0.435 0.565 36 H 0.128 0.872 37 H 0.416 0.584 38 H 0.072 0.928 39 H 0.100 0.900 40 H 0.157 0.843 41 H 0.151 0.849 42 H 0.163 0.837 43 H 0.105 0.895 44 H 0.094 0.906 45 H 0.154 0.846 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.009 6.252 -0.272 6.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.148 4.148 3 Si 0.698 3.302 4 C -0.243 4.243 5 C -0.034 4.034 6 N -0.181 5.181 7 C -0.041 4.041 8 C -0.088 4.088 9 C -0.141 4.141 10 C 0.354 3.646 11 O -0.462 6.462 12 N -0.346 5.346 13 C 0.008 3.992 14 H 0.107 0.893 15 C -0.182 4.182 16 C -0.085 4.085 17 H 0.143 0.857 18 C -0.009 4.009 19 C -0.178 4.178 20 C 0.099 3.901 21 F -0.119 7.119 22 C -0.225 4.225 23 C 0.098 3.902 24 F -0.119 7.119 25 C -0.173 4.173 26 C -0.162 4.162 27 C -0.126 4.126 28 C -0.106 4.106 29 C -0.087 4.087 30 H 0.243 0.757 31 H 0.114 0.886 32 H -0.212 1.212 33 H -0.234 1.234 34 H 0.235 0.765 35 H 0.275 0.725 36 H 0.146 0.854 37 H 0.254 0.746 38 H 0.091 0.909 39 H 0.118 0.882 40 H 0.175 0.825 41 H 0.168 0.832 42 H 0.180 0.820 43 H 0.123 0.877 44 H 0.112 0.888 45 H 0.171 0.829 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.931 6.361 -0.337 6.437 hybrid contribution -0.078 -1.216 -0.136 1.226 sum 0.852 5.145 -0.473 5.236 Atomic orbital electron populations 1.86460 1.17862 1.82291 1.50277 1.24512 0.84623 1.10055 0.95569 0.94078 0.77110 0.73742 0.85289 1.20854 1.12578 0.91575 0.99265 1.22357 0.97169 0.95781 0.88056 1.41822 1.54112 1.03282 1.18865 1.18127 1.03938 0.86908 0.95149 1.20150 0.99792 0.88851 1.00038 1.19447 1.06303 0.91741 0.96652 1.18338 0.76701 0.85368 0.84171 1.90770 1.46661 1.86729 1.22006 1.45443 1.63212 1.04827 1.21082 1.21883 0.98656 0.80852 0.97853 0.89322 1.23593 0.97539 1.00656 0.96369 1.21723 0.96613 0.91468 0.98696 0.85688 1.19450 0.93795 0.95652 0.91995 1.21273 1.03243 0.90898 1.02371 1.17424 0.97457 0.87204 0.88056 1.91529 1.90457 1.65510 1.64415 1.21180 1.02948 1.02137 0.96203 1.17456 0.92240 0.94037 0.86446 1.91531 1.69269 1.93132 1.57918 1.21369 0.99746 0.95050 1.01161 1.23413 0.94491 0.98681 0.99627 1.20901 0.99517 0.98070 0.94066 1.20409 0.99219 0.90826 1.00109 1.19584 1.00919 0.94289 0.93913 0.75716 0.88580 1.21242 1.23424 0.76543 0.72494 0.85361 0.74570 0.90895 0.88156 0.82510 0.83156 0.81956 0.87675 0.88788 0.82885 0.84561 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.44 12.88 -148.98 -1.92 -1.48 16 2 C -0.04 0.08 3.06 71.24 0.22 0.29 16 3 Si 0.79 -4.22 30.75 68.60 2.11 -2.11 16 4 C -0.24 0.32 5.57 -18.64 -0.10 0.22 16 5 C 0.10 -0.62 10.43 83.09 0.87 0.25 16 6 N -0.58 2.48 6.06 -187.72 -1.14 1.34 16 7 C 0.07 0.14 7.26 38.96 0.28 0.43 16 8 C -0.07 -0.30 9.61 22.63 0.22 -0.08 16 9 C -0.14 -0.47 5.87 -20.08 -0.12 -0.59 16 10 C 0.57 2.93 7.76 86.71 0.67 3.60 16 11 O -0.58 -7.77 15.91 -3.99 -0.06 -7.84 16 12 N -0.69 1.66 5.21 -443.16 -2.31 -0.65 16 13 C 0.11 -0.34 4.32 45.52 0.20 -0.14 16 14 H 0.09 0.15 7.47 -2.39 -0.02 0.13 16 15 C -0.14 0.66 7.25 31.12 0.23 0.89 16 16 C -0.07 0.52 3.86 -11.01 -0.04 0.47 16 17 H 0.13 -1.39 8.09 -2.39 -0.02 -1.41 16 18 C -0.01 0.04 5.29 -19.88 -0.11 -0.07 16 19 C -0.16 0.32 8.57 22.32 0.19 0.51 16 20 C 0.12 0.23 7.30 22.37 0.16 0.39 16 21 F -0.14 -0.68 17.27 44.97 0.78 0.09 16 22 C -0.21 -0.40 10.01 22.36 0.22 -0.17 16 23 C 0.12 0.18 7.30 22.37 0.16 0.34 16 24 F -0.14 -0.59 17.27 44.97 0.78 0.18 16 25 C -0.15 0.43 9.69 22.32 0.22 0.64 16 26 C -0.12 0.95 7.29 31.12 0.23 1.18 16 27 C -0.11 0.08 9.46 22.28 0.21 0.30 16 28 C -0.09 -0.12 10.03 22.20 0.22 0.11 16 29 C -0.08 -0.23 6.35 -20.14 -0.13 -0.36 16 30 H 0.39 -3.56 8.70 -74.05 -0.64 -4.20 16 31 H 0.10 0.03 7.96 -2.39 -0.02 0.01 16 32 H -0.29 0.12 7.11 99.48 0.71 0.82 16 33 H -0.31 -1.03 7.11 99.48 0.71 -0.32 16 34 H 0.22 -3.33 6.35 -2.91 -0.02 -3.35 16 35 H 0.43 -4.27 8.96 -92.71 -0.83 -5.11 16 36 H 0.13 0.64 7.62 -2.91 -0.02 0.62 16 37 H 0.42 -3.49 6.69 -92.70 -0.62 -4.11 16 38 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 39 H 0.10 -0.51 6.32 -2.39 -0.02 -0.52 16 40 H 0.16 -0.79 6.67 -2.91 -0.02 -0.81 16 41 H 0.15 0.08 8.06 -2.91 -0.02 0.05 16 42 H 0.16 -1.15 8.05 -2.91 -0.02 -1.17 16 43 H 0.10 -0.82 7.71 -2.39 -0.02 -0.84 16 44 H 0.09 -0.89 8.14 -2.39 -0.02 -0.90 16 45 H 0.15 -1.21 6.36 -2.91 -0.02 -1.23 16 46 H 0.14 -0.10 8.06 -2.91 -0.02 -0.13 16 Total: 0.00 -25.98 395.20 1.07 -24.91 By element: Atomic # 1 Polarization: -21.70 SS G_CDS: -0.96 Total: -22.66 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: 3.80 Total: 8.21 kcal Atomic # 7 Polarization: 4.14 SS G_CDS: -3.45 Total: 0.69 kcal Atomic # 8 Polarization: -7.33 SS G_CDS: -1.98 Total: -9.31 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 1.55 Total: 0.28 kcal Atomic # 14 Polarization: -4.22 SS G_CDS: 2.11 Total: -2.11 kcal Total: -25.98 1.07 -24.91 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.642 kcal (2) G-P(sol) polarization free energy of solvation -25.985 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.626 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.075 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.910 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.552 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds