Wall clock time and date at job start Tue Mar 9 2021 13:08:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47139 * 2 1 4 4 C 1.50704 * 109.47194 * 119.99990 * 2 1 3 5 5 C 1.38402 * 119.82517 * 65.00059 * 4 2 1 6 6 C 1.37898 * 120.17115 * 179.97438 * 5 4 2 7 7 C 1.39833 * 119.82149 * 0.02562 * 6 5 4 8 8 C 1.47212 * 120.16762 * 179.97438 * 7 6 5 9 9 C 1.34805 * 120.00209 * 180.02562 * 8 7 6 10 10 C 1.46430 * 120.00369 * 180.02562 * 9 8 7 11 11 O 1.21697 * 119.99549 * 359.97438 * 10 9 8 12 12 N 1.34770 * 120.00330 * 179.97438 * 10 9 8 13 13 C 1.46499 * 120.00157 * 179.97438 * 12 10 9 14 14 H 1.08996 * 112.84800 * 23.80973 * 13 12 10 15 15 C 1.53777 * 113.61160 * 155.00230 * 13 12 10 16 16 C 1.53781 * 87.08336 * 89.20358 * 15 13 12 17 17 H 1.09002 * 113.61228 * 270.88201 * 16 15 13 18 18 C 1.50701 * 113.61772 * 140.06093 * 16 15 13 19 19 C 1.38210 * 119.97490 * 301.25977 * 18 16 15 20 20 C 1.38472 * 120.02174 * 179.72380 * 19 18 16 21 21 F 1.35106 * 120.01362 * 180.29169 * 20 19 18 22 22 C 1.38416 * 119.97553 * 0.54860 * 20 19 18 23 23 C 1.38411 * 119.95123 * 359.72463 * 22 20 19 24 24 F 1.35105 * 120.01688 * 179.97438 * 23 22 20 25 25 C 1.38205 * 119.97331 * 121.52936 * 18 16 15 26 26 C 1.53775 * 113.69461 * 252.53673 * 13 12 10 27 27 C 1.39832 * 119.66529 * 0.25209 * 7 6 5 28 28 C 1.37894 * 119.82146 * 359.44858 * 27 7 6 29 29 H 0.96698 * 114.00442 * 299.99786 * 1 2 3 30 30 H 1.09002 * 109.47201 * 239.99571 * 2 1 3 31 31 H 1.48498 * 110.00077 * 300.00011 * 3 2 1 32 32 H 1.48500 * 109.99950 * 61.32093 * 3 2 1 33 33 H 1.08001 * 119.91983 * 0.02562 * 5 4 2 34 34 H 1.08000 * 120.08758 * 180.02562 * 6 5 4 35 35 H 1.08006 * 119.99922 * 359.97438 * 8 7 6 36 36 H 1.08006 * 119.99869 * 359.97438 * 9 8 7 37 37 H 0.97006 * 119.99979 * 0.02562 * 12 10 9 38 38 H 1.08997 * 113.61941 * 334.65065 * 15 13 12 39 39 H 1.09009 * 113.68972 * 203.76145 * 15 13 12 40 40 H 1.07999 * 119.98933 * 359.97438 * 19 18 16 41 41 H 1.07998 * 120.02308 * 179.70572 * 22 20 19 42 42 H 1.08003 * 119.99133 * 0.02562 * 25 18 16 43 43 H 1.08993 * 113.61636 * 156.31970 * 26 13 12 44 44 H 1.09008 * 113.61006 * 25.42212 * 26 13 12 45 45 H 1.08003 * 120.09005 * 179.72163 * 27 7 6 46 46 H 1.08005 * 119.91487 * 180.29785 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6824 -2.0619 1.3949 6 6 2.1392 -2.7192 2.5178 7 6 2.8551 -2.0164 3.4919 8 6 3.3458 -2.7103 4.6939 9 6 4.0352 -2.0295 5.6311 10 6 4.5238 -2.7198 6.8264 11 8 4.3071 -3.9082 6.9740 12 7 5.2135 -2.0392 7.7631 13 6 5.7019 -2.7298 8.9593 14 1 5.8233 -3.8025 8.8088 15 6 6.9248 -2.0558 9.6035 16 6 5.9315 -1.2209 10.4288 17 1 5.6300 -0.2937 9.9414 18 6 6.3566 -1.0181 11.8603 19 6 6.5705 -2.1112 12.6785 20 6 6.9666 -1.9262 13.9924 21 9 7.1813 -2.9950 14.7904 22 6 7.1373 -0.6457 14.4895 23 6 6.9174 0.4484 13.6707 24 9 7.0831 1.6989 14.1546 25 6 6.5268 0.2609 12.3555 26 6 4.9285 -2.3710 10.2391 27 6 3.0975 -0.6499 3.3213 28 6 2.6395 -0.0081 2.1900 29 1 -0.3934 0.4416 0.7650 30 1 1.7923 -0.5139 -0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5879 2.4585 1.2243 33 1 1.1296 -2.6034 0.6415 34 1 1.9445 -3.7739 2.6445 35 1 3.1528 -3.7649 4.8252 36 1 4.2279 -0.9748 5.4999 37 1 5.3859 -1.0918 7.6457 38 1 7.5166 -1.4651 8.9044 39 1 7.5316 -2.7327 10.2051 40 1 6.4325 -3.1102 12.2919 41 1 7.4417 -0.5004 15.5154 42 1 6.3548 1.1145 11.7165 43 1 4.9884 -3.1349 11.0141 44 1 3.9085 -2.0345 10.0529 45 1 3.6459 -0.0994 4.0715 46 1 2.8301 1.0463 2.0544 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:45 Heat of formation + Delta-G solvation = -54.991672 kcal Electronic energy + Delta-G solvation = -30681.676430 eV Core-core repulsion = 25947.060728 eV Total energy + Delta-G solvation = -4734.615702 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.132 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -50.08166 -50.05723 -41.60048 -40.68763 -40.19914 -38.66200 -37.88269 -35.07152 -34.54536 -32.24105 -31.98664 -31.37883 -31.09266 -27.45653 -26.69269 -26.36621 -24.39257 -23.98935 -23.79190 -22.88153 -22.08107 -20.61250 -20.19305 -19.08379 -18.77624 -18.13904 -18.12136 -17.43791 -17.23546 -17.05212 -16.88819 -16.69480 -16.57694 -16.37825 -16.20137 -16.04788 -15.82625 -15.58141 -15.35038 -15.21659 -15.07183 -14.60700 -14.49776 -14.11098 -14.05373 -13.79725 -13.70513 -13.47849 -13.26949 -13.08547 -13.02767 -12.92947 -12.77139 -12.27235 -12.08194 -12.06415 -11.68411 -11.58144 -11.33424 -11.29671 -11.06624 -10.60540 -10.10929 -9.96374 -9.90136 -9.81492 -9.23323 -4.91115 -0.53394 -0.10581 -0.08753 0.41267 0.90260 1.31516 1.60139 1.97623 2.15501 2.23132 2.26600 2.77446 2.82399 3.26694 3.38841 3.41064 3.56135 3.58605 3.68065 3.71306 3.77282 3.82212 3.91110 3.93717 3.96411 4.07467 4.13392 4.19252 4.23323 4.37536 4.46655 4.58845 4.61715 4.73257 4.75702 4.78211 4.79418 4.85884 4.88736 4.97268 4.97994 5.00030 5.04843 5.10768 5.15224 5.19481 5.34685 5.40838 5.49611 5.61595 5.63638 5.71568 5.91799 6.47417 6.56954 7.24781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.089 4.089 3 Si 0.772 3.228 4 C -0.110 4.110 5 C -0.107 4.107 6 C -0.104 4.104 7 C -0.080 4.080 8 C -0.023 4.023 9 C -0.206 4.206 10 C 0.544 3.456 11 O -0.592 6.592 12 N -0.693 5.693 13 C 0.113 3.887 14 H 0.084 0.916 15 C -0.124 4.124 16 C -0.065 4.065 17 H 0.128 0.872 18 C -0.009 4.009 19 C -0.160 4.160 20 C 0.117 3.883 21 F -0.141 7.141 22 C -0.206 4.206 23 C 0.117 3.883 24 F -0.140 7.140 25 C -0.154 4.154 26 C -0.144 4.144 27 C -0.094 4.094 28 C -0.123 4.123 29 H 0.386 0.614 30 H 0.123 0.877 31 H -0.308 1.308 32 H -0.277 1.277 33 H 0.128 0.872 34 H 0.135 0.865 35 H 0.121 0.879 36 H 0.166 0.834 37 H 0.420 0.580 38 H 0.095 0.905 39 H 0.101 0.899 40 H 0.156 0.844 41 H 0.150 0.850 42 H 0.164 0.836 43 H 0.096 0.904 44 H 0.072 0.928 45 H 0.159 0.841 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.050 4.795 -2.275 6.122 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.197 4.197 3 Si 0.677 3.323 4 C -0.110 4.110 5 C -0.125 4.125 6 C -0.122 4.122 7 C -0.080 4.080 8 C -0.042 4.042 9 C -0.226 4.226 10 C 0.335 3.665 11 O -0.474 6.474 12 N -0.344 5.344 13 C 0.007 3.993 14 H 0.102 0.898 15 C -0.162 4.162 16 C -0.083 4.083 17 H 0.146 0.854 18 C -0.009 4.009 19 C -0.179 4.179 20 C 0.098 3.902 21 F -0.120 7.120 22 C -0.225 4.225 23 C 0.098 3.902 24 F -0.118 7.118 25 C -0.172 4.172 26 C -0.183 4.183 27 C -0.111 4.111 28 C -0.141 4.141 29 H 0.235 0.765 30 H 0.141 0.859 31 H -0.237 1.237 32 H -0.203 1.203 33 H 0.146 0.854 34 H 0.153 0.847 35 H 0.139 0.861 36 H 0.184 0.816 37 H 0.258 0.742 38 H 0.114 0.886 39 H 0.120 0.880 40 H 0.174 0.826 41 H 0.168 0.832 42 H 0.182 0.818 43 H 0.114 0.886 44 H 0.091 0.909 45 H 0.177 0.823 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.820 4.495 -2.637 5.926 hybrid contribution -1.132 -0.113 1.038 1.540 sum 1.688 4.383 -1.598 4.961 Atomic orbital electron populations 1.86584 1.18590 1.80431 1.50189 1.25327 0.83422 1.12207 0.98760 0.94027 0.90168 0.71702 0.76376 1.20526 0.98868 0.94780 0.96830 1.21084 0.99313 0.94224 0.97913 1.21615 0.96546 1.00674 0.93361 1.19125 1.00007 0.94303 0.94595 1.22361 0.91470 0.99543 0.90874 1.23013 1.03400 1.02203 0.94027 1.18750 0.77538 0.86277 0.83961 1.90826 1.59254 1.17625 1.79726 1.45420 1.55332 1.13778 1.19886 1.21825 0.95598 0.97599 0.84267 0.89783 1.23398 0.95541 0.98793 0.98466 1.21722 0.97058 0.99828 0.89725 0.85431 1.19476 0.94727 0.90766 0.95976 1.21272 1.03010 1.01941 0.91629 1.17437 1.00705 0.82698 0.89383 1.91532 1.92378 1.54473 1.73587 1.21178 1.07674 0.90935 1.02732 1.17464 1.00802 0.78800 0.93127 1.91534 1.93051 1.38688 1.88569 1.21375 1.02670 0.99466 0.93712 1.23582 0.98888 0.98195 0.97589 1.21658 0.98495 0.93103 0.97886 1.21220 0.98330 1.00652 0.93850 0.76456 0.85926 1.23656 1.20306 0.85399 0.84699 0.86141 0.81628 0.74229 0.88605 0.88035 0.82648 0.83208 0.81804 0.88555 0.90900 0.82334 0.83409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.81 12.83 -148.98 -1.91 -2.72 16 2 C -0.09 0.20 2.80 71.24 0.20 0.40 16 3 Si 0.77 -3.25 29.87 68.60 2.05 -1.20 16 4 C -0.11 0.23 5.36 -19.79 -0.11 0.13 16 5 C -0.11 0.04 9.66 22.23 0.21 0.26 16 6 C -0.10 0.06 9.80 22.58 0.22 0.28 16 7 C -0.08 0.14 5.87 -20.15 -0.12 0.02 16 8 C -0.02 0.02 9.46 23.84 0.23 0.24 16 9 C -0.21 0.79 9.41 23.62 0.22 1.01 16 10 C 0.54 0.71 7.74 86.38 0.67 1.38 16 11 O -0.59 -6.75 15.83 -4.34 -0.07 -6.82 16 12 N -0.69 3.92 5.26 -444.28 -2.34 1.58 16 13 C 0.11 -0.51 4.32 45.51 0.20 -0.32 16 14 H 0.08 0.08 7.46 -2.39 -0.02 0.06 16 15 C -0.12 1.12 7.29 31.12 0.23 1.35 16 16 C -0.07 0.60 3.86 -11.01 -0.04 0.56 16 17 H 0.13 -1.68 8.09 -2.39 -0.02 -1.70 16 18 C -0.01 0.05 5.29 -19.88 -0.11 -0.06 16 19 C -0.16 0.42 8.53 22.32 0.19 0.61 16 20 C 0.12 0.17 7.30 22.37 0.16 0.33 16 21 F -0.14 -0.64 17.27 44.97 0.78 0.14 16 22 C -0.21 -0.28 10.01 22.35 0.22 -0.05 16 23 C 0.12 0.08 7.30 22.37 0.16 0.24 16 24 F -0.14 -0.47 17.27 44.97 0.78 0.30 16 25 C -0.15 0.60 9.69 22.32 0.22 0.81 16 26 C -0.14 0.83 7.26 31.12 0.23 1.06 16 27 C -0.09 0.50 9.41 22.57 0.21 0.71 16 28 C -0.12 0.60 8.65 22.23 0.19 0.79 16 29 H 0.39 -1.63 8.70 -74.06 -0.64 -2.28 16 30 H 0.12 -0.41 7.96 -2.39 -0.02 -0.43 16 31 H -0.31 -1.36 7.11 99.48 0.71 -0.66 16 32 H -0.28 0.40 7.00 99.48 0.70 1.10 16 33 H 0.13 -0.10 8.06 -2.91 -0.02 -0.12 16 34 H 0.14 -0.33 8.06 -2.91 -0.02 -0.35 16 35 H 0.12 0.29 7.52 -2.91 -0.02 0.27 16 36 H 0.17 -1.94 6.07 -2.91 -0.02 -1.95 16 37 H 0.42 -5.36 8.68 -92.70 -0.80 -6.17 16 38 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 39 H 0.10 -0.87 7.66 -2.38 -0.02 -0.89 16 40 H 0.16 -0.84 6.72 -2.91 -0.02 -0.86 16 41 H 0.15 0.00 8.06 -2.91 -0.02 -0.02 16 42 H 0.16 -1.40 8.05 -2.91 -0.02 -1.42 16 43 H 0.10 -0.53 6.38 -2.39 -0.02 -0.55 16 44 H 0.07 -0.30 8.14 -2.38 -0.02 -0.32 16 45 H 0.16 -1.82 6.17 -2.91 -0.02 -1.84 16 46 H 0.15 -1.31 4.81 -2.91 -0.01 -1.32 16 Total: 0.00 -21.81 396.16 2.32 -19.50 By element: Atomic # 1 Polarization: -20.19 SS G_CDS: -0.36 Total: -20.55 kcal Atomic # 6 Polarization: 6.37 SS G_CDS: 3.39 Total: 9.76 kcal Atomic # 7 Polarization: 3.92 SS G_CDS: -2.34 Total: 1.58 kcal Atomic # 8 Polarization: -7.56 SS G_CDS: -1.98 Total: -9.54 kcal Atomic # 9 Polarization: -1.11 SS G_CDS: 1.55 Total: 0.44 kcal Atomic # 14 Polarization: -3.25 SS G_CDS: 2.05 Total: -1.20 kcal Total: -21.81 2.32 -19.50 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.494 kcal (2) G-P(sol) polarization free energy of solvation -21.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.307 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.497 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds