Wall clock time and date at job start Tue Mar 9 2021 13:08:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86300 * 109.47282 * 2 1 4 4 C 1.50692 * 109.47172 * 120.00264 * 2 1 3 5 5 C 1.38190 * 119.84215 * 14.99727 * 4 2 1 6 6 C 1.38313 * 120.14549 * 180.02562 * 5 4 2 7 7 F 1.35093 * 120.08734 * 179.97438 * 6 5 4 8 8 C 1.39811 * 119.83183 * 359.97435 * 6 5 4 9 9 C 1.47691 * 120.15531 * 179.97438 * 8 6 5 10 10 O 1.21568 * 120.00324 * 0.02562 * 9 8 6 11 11 N 1.34781 * 119.99803 * 180.02562 * 9 8 6 12 12 C 1.46504 * 119.99665 * 180.02562 * 11 9 8 13 13 H 1.08994 * 112.90940 * 336.24759 * 12 11 9 14 14 C 1.53779 * 113.61484 * 107.49929 * 12 11 9 15 15 C 1.53785 * 87.08093 * 89.11287 * 14 12 11 16 16 H 1.09002 * 113.61570 * 270.88522 * 15 14 12 17 17 C 1.50701 * 113.69000 * 139.98979 * 15 14 12 18 18 C 1.38202 * 119.97654 * 320.66118 * 17 15 14 19 19 C 1.38478 * 120.02501 * 179.76620 * 18 17 15 20 20 F 1.35104 * 120.00970 * 180.25184 * 19 18 17 21 21 C 1.38415 * 119.97359 * 0.53137 * 19 18 17 22 22 C 1.38417 * 119.95174 * 359.72280 * 21 19 18 23 23 F 1.35097 * 120.01531 * 180.02562 * 22 21 19 24 24 C 1.38211 * 119.97319 * 140.93577 * 17 15 14 25 25 C 1.53781 * 87.08241 * 25.43228 * 15 14 12 26 26 C 1.39658 * 119.68771 * 0.25548 * 8 6 5 27 27 C 1.38074 * 119.85094 * 359.53647 * 26 8 6 28 28 F 1.35099 * 119.91304 * 180.18688 * 27 26 8 29 29 H 0.96702 * 113.99310 * 300.00164 * 1 2 3 30 30 H 1.08998 * 109.46692 * 240.00344 * 2 1 3 31 31 H 1.48504 * 109.99820 * 300.00218 * 3 2 1 32 32 H 1.48496 * 110.00131 * 61.32026 * 3 2 1 33 33 H 1.08000 * 119.92940 * 359.97438 * 5 4 2 34 34 H 0.96996 * 120.00382 * 359.97438 * 11 9 8 35 35 H 1.09003 * 113.61775 * 334.57164 * 14 12 11 36 36 H 1.08996 * 113.61960 * 203.65890 * 14 12 11 37 37 H 1.08005 * 119.98798 * 0.02562 * 18 17 15 38 38 H 1.08001 * 120.02303 * 179.70060 * 21 19 18 39 39 H 1.07996 * 119.98629 * 359.97438 * 24 17 15 40 40 H 1.09005 * 113.61302 * 89.11252 * 25 15 14 41 41 H 1.08993 * 113.62030 * 220.02098 * 25 15 14 42 42 H 1.07998 * 120.07323 * 179.72043 * 26 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.0690 -1.4962 1.9709 6 6 1.5232 -2.1507 3.1016 7 9 0.6790 -2.9181 3.8250 8 6 2.8584 -2.0159 3.4940 9 6 3.3509 -2.7111 4.7004 10 8 2.5950 -3.4028 5.3546 11 7 4.6385 -2.5786 5.0761 12 6 5.1271 -3.2686 6.2725 13 1 4.3331 -3.5018 6.9818 14 6 6.0467 -4.4617 5.9631 15 6 7.2182 -3.4659 5.9939 16 1 7.4262 -3.0065 5.0276 17 6 8.4553 -4.0069 6.6632 18 6 8.3411 -4.7885 7.7972 19 6 9.4770 -5.2901 8.4103 20 9 9.3647 -6.0584 9.5159 21 6 10.7275 -4.9993 7.8932 22 6 10.8410 -4.2120 6.7604 23 9 12.0609 -3.9277 6.2544 24 6 9.7035 -3.7162 6.1458 25 6 6.3500 -2.5940 6.9163 26 6 3.7227 -1.2162 2.7431 27 6 3.2565 -0.5722 1.6142 28 9 4.0924 0.1988 0.8848 29 1 -0.3932 0.4418 0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5881 2.4585 1.2242 33 1 0.0378 -1.5989 1.6667 34 1 5.2418 -2.0270 4.5539 35 1 5.8744 -4.9028 4.9813 36 1 6.0831 -5.2034 6.7609 37 1 7.3654 -5.0117 8.2030 38 1 11.6142 -5.3861 8.3735 39 1 9.7917 -3.1019 5.2619 40 1 6.4692 -2.8252 7.9749 41 1 6.4223 -1.5274 6.7042 42 1 4.7541 -1.1041 3.0431 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:48 Heat of formation + Delta-G solvation = -152.414562 kcal Electronic energy + Delta-G solvation = -33643.303055 eV Core-core repulsion = 28249.318588 eV Total energy + Delta-G solvation = -5393.984467 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.098 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -50.27774 -50.10332 -50.06665 -50.03889 -41.77804 -40.77844 -39.87734 -38.63742 -37.75009 -34.85819 -33.05826 -31.81978 -31.41087 -31.29459 -28.09453 -26.68630 -26.46751 -24.23049 -24.17796 -23.81002 -22.89990 -22.01077 -20.47820 -19.58110 -19.09521 -18.83652 -18.50160 -18.10436 -17.86308 -17.42187 -17.38515 -17.29286 -17.03472 -16.82977 -16.66922 -16.62878 -16.36123 -16.09621 -15.98342 -15.75969 -15.71440 -15.56917 -15.34379 -15.31116 -14.81464 -14.44354 -14.10333 -14.04670 -13.81740 -13.69272 -13.47835 -13.25962 -13.08133 -12.98199 -12.89797 -12.77585 -12.63618 -12.10375 -12.04103 -11.69012 -11.31279 -11.27213 -11.10099 -10.29470 -10.14043 -9.88900 -9.79603 -9.72686 -4.79723 -0.76537 -0.25614 -0.08735 -0.06688 1.11067 1.47681 1.57484 1.84438 1.91887 2.26730 2.30721 2.78311 2.79422 2.85059 3.12386 3.17677 3.28136 3.39858 3.45780 3.54241 3.58221 3.68349 3.79361 3.84015 3.92415 3.93928 4.09143 4.14038 4.25024 4.37435 4.43709 4.58218 4.66197 4.74075 4.76133 4.76656 4.78318 4.79949 4.80541 4.87885 4.99173 4.99632 5.06437 5.13701 5.31702 5.42504 5.57536 5.73544 6.35196 6.35644 7.04114 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.082 4.082 3 Si 0.750 3.250 4 C -0.090 4.090 5 C -0.129 4.129 6 C 0.135 3.865 7 F -0.130 7.130 8 C -0.158 4.158 9 C 0.561 3.439 10 O -0.565 6.565 11 N -0.687 5.687 12 C 0.113 3.887 13 H 0.087 0.913 14 C -0.144 4.144 15 C -0.066 4.066 16 H 0.132 0.868 17 C -0.009 4.009 18 C -0.160 4.160 19 C 0.116 3.884 20 F -0.142 7.142 21 C -0.207 4.207 22 C 0.117 3.883 23 F -0.140 7.140 24 C -0.152 4.152 25 C -0.124 4.124 26 C -0.064 4.064 27 C 0.086 3.914 28 F -0.090 7.090 29 H 0.390 0.610 30 H 0.147 0.853 31 H -0.290 1.290 32 H -0.283 1.283 33 H 0.164 0.836 34 H 0.419 0.581 35 H 0.075 0.925 36 H 0.097 0.903 37 H 0.156 0.844 38 H 0.149 0.851 39 H 0.166 0.834 40 H 0.103 0.897 41 H 0.099 0.901 42 H 0.193 0.807 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.238 4.516 -2.888 6.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.190 4.190 3 Si 0.653 3.347 4 C -0.091 4.091 5 C -0.147 4.147 6 C 0.114 3.886 7 F -0.109 7.109 8 C -0.162 4.162 9 C 0.348 3.652 10 O -0.444 6.444 11 N -0.340 5.340 12 C 0.007 3.993 13 H 0.106 0.894 14 C -0.183 4.183 15 C -0.084 4.084 16 H 0.149 0.851 17 C -0.009 4.009 18 C -0.179 4.179 19 C 0.097 3.903 20 F -0.121 7.121 21 C -0.226 4.226 22 C 0.098 3.902 23 F -0.119 7.119 24 C -0.171 4.171 25 C -0.161 4.161 26 C -0.083 4.083 27 C 0.066 3.934 28 F -0.069 7.069 29 H 0.240 0.760 30 H 0.164 0.836 31 H -0.218 1.218 32 H -0.209 1.209 33 H 0.181 0.819 34 H 0.258 0.742 35 H 0.093 0.907 36 H 0.115 0.885 37 H 0.174 0.826 38 H 0.167 0.833 39 H 0.184 0.816 40 H 0.121 0.879 41 H 0.117 0.883 42 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges 3.642 4.520 -2.917 6.496 hybrid contribution -0.756 -0.507 0.700 1.148 sum 2.887 4.013 -2.217 5.418 Atomic orbital electron populations 1.86598 1.17517 1.80396 1.50560 1.25196 0.84345 1.11506 0.97920 0.93957 0.91581 0.71478 0.77717 1.20504 0.92808 0.97642 0.98172 1.20853 1.02891 0.97555 0.93418 1.17987 0.87289 0.92156 0.91178 1.91585 1.70063 1.72642 1.76566 1.19803 0.93279 1.04235 0.98930 1.18064 0.82770 0.80439 0.83892 1.90878 1.56954 1.41025 1.55525 1.45365 1.09614 1.50456 1.28533 1.21903 0.96310 0.93982 0.87065 0.89433 1.23595 0.94211 0.96811 1.03649 1.21760 0.89114 0.97307 1.00224 0.85058 1.19470 0.94506 0.94016 0.92919 1.21278 0.98467 1.00520 0.97588 1.17453 0.94067 0.93708 0.85106 1.91530 1.96885 1.73010 1.50636 1.21182 0.98572 1.03961 0.98910 1.17474 0.80751 0.98229 0.93781 1.91533 1.42017 1.91869 1.86440 1.21389 0.90111 1.02849 1.02732 1.23420 0.91695 1.00863 1.00163 1.21375 1.01808 0.93275 0.91842 1.17081 0.87307 0.96197 0.92784 1.91240 1.69110 1.70927 1.75601 0.75968 0.83559 1.21787 1.20901 0.81859 0.74165 0.90656 0.88462 0.82638 0.83341 0.81600 0.87893 0.88269 0.78994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.12 11.63 -148.98 -1.73 -0.61 16 2 C -0.08 0.39 2.96 71.23 0.21 0.61 16 3 Si 0.75 -3.01 29.56 68.60 2.03 -0.98 16 4 C -0.09 0.43 5.14 -19.78 -0.10 0.33 16 5 C -0.13 0.24 9.20 22.28 0.20 0.45 16 6 C 0.13 0.32 7.28 22.67 0.17 0.49 16 7 F -0.13 -1.24 15.55 44.97 0.70 -0.54 16 8 C -0.16 0.27 5.88 -20.06 -0.12 0.15 16 9 C 0.56 0.87 7.77 86.74 0.67 1.54 16 10 O -0.56 -6.74 14.94 -3.93 -0.06 -6.80 16 11 N -0.69 4.84 5.21 -443.04 -2.31 2.53 16 12 C 0.11 -0.70 4.32 45.52 0.20 -0.50 16 13 H 0.09 -0.06 7.46 -2.39 -0.02 -0.08 16 14 C -0.14 1.07 7.26 31.12 0.23 1.29 16 15 C -0.07 0.73 3.85 -11.01 -0.04 0.68 16 16 H 0.13 -2.05 8.09 -2.39 -0.02 -2.07 16 17 C -0.01 0.06 5.29 -19.88 -0.11 -0.05 16 18 C -0.16 0.58 8.51 22.32 0.19 0.77 16 19 C 0.12 0.09 7.30 22.37 0.16 0.25 16 20 F -0.14 -0.59 17.27 44.97 0.78 0.19 16 21 C -0.21 -0.16 10.01 22.35 0.22 0.07 16 22 C 0.12 -0.02 7.30 22.37 0.16 0.14 16 23 F -0.14 -0.37 17.27 44.97 0.78 0.41 16 24 C -0.15 0.78 9.69 22.32 0.22 1.00 16 25 C -0.12 1.35 7.29 31.12 0.23 1.57 16 26 C -0.06 0.59 9.52 22.57 0.21 0.80 16 27 C 0.09 -0.66 6.65 22.33 0.15 -0.51 16 28 F -0.09 0.89 13.69 44.97 0.62 1.50 16 29 H 0.39 -3.01 8.42 -74.06 -0.62 -3.63 16 30 H 0.15 -1.04 7.96 -2.39 -0.02 -1.06 16 31 H -0.29 -0.97 7.11 99.48 0.71 -0.26 16 32 H -0.28 -0.21 7.11 99.48 0.71 0.49 16 33 H 0.16 -0.51 7.06 -2.91 -0.02 -0.53 16 34 H 0.42 -6.23 6.73 -92.71 -0.62 -6.86 16 35 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 36 H 0.10 -0.67 6.41 -2.39 -0.02 -0.68 16 37 H 0.16 -1.00 6.72 -2.91 -0.02 -1.02 16 38 H 0.15 -0.05 8.06 -2.91 -0.02 -0.08 16 39 H 0.17 -1.67 8.05 -2.91 -0.02 -1.70 16 40 H 0.10 -1.05 7.62 -2.38 -0.02 -1.07 16 41 H 0.10 -1.34 8.14 -2.39 -0.02 -1.36 16 42 H 0.19 -3.43 6.41 -2.91 -0.02 -3.45 16 Total: 0.00 -22.61 369.81 3.58 -19.03 By element: Atomic # 1 Polarization: -23.74 SS G_CDS: -0.07 Total: -23.81 kcal Atomic # 6 Polarization: 6.23 SS G_CDS: 2.86 Total: 9.08 kcal Atomic # 7 Polarization: 4.84 SS G_CDS: -2.31 Total: 2.53 kcal Atomic # 8 Polarization: -5.62 SS G_CDS: -1.79 Total: -7.41 kcal Atomic # 9 Polarization: -1.31 SS G_CDS: 2.87 Total: 1.56 kcal Atomic # 14 Polarization: -3.01 SS G_CDS: 2.03 Total: -0.98 kcal Total: -22.61 3.58 -19.03 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.387 kcal (2) G-P(sol) polarization free energy of solvation -22.610 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.997 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.027 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.415 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds