Wall clock time and date at job start Tue Mar 9 2021 13:09:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86307 * 109.47360 * 2 1 4 4 C 1.50699 * 109.47128 * 120.00245 * 2 1 3 5 5 C 1.34834 * 125.65536 * 64.99518 * 4 2 1 6 6 C 1.40790 * 107.05046 * 180.02562 * 5 4 2 7 7 C 1.36108 * 106.73783 * 0.02562 * 6 5 4 8 8 C 1.47558 * 125.94840 * 179.97438 * 7 6 5 9 9 C 1.39928 * 119.95595 * 0.02562 * 8 7 6 10 10 C 1.36422 * 120.27847 * 179.97438 * 9 8 7 11 11 C 1.39870 * 120.19086 * 0.02562 * 10 9 8 12 12 C 1.47297 * 120.05198 * 180.02562 * 11 10 9 13 13 O 1.21616 * 120.00354 * 179.97438 * 12 11 10 14 14 N 1.34772 * 119.99480 * 359.97438 * 12 11 10 15 15 C 1.46504 * 119.99880 * 180.02562 * 14 12 11 16 16 H 1.09006 * 112.84808 * 336.19276 * 15 14 12 17 17 C 1.53951 * 113.54042 * 107.50520 * 15 14 12 18 18 C 1.53783 * 87.02059 * 89.18876 * 17 15 14 19 19 H 1.08997 * 113.61405 * 270.77492 * 18 17 15 20 20 C 1.50694 * 113.61435 * 139.95299 * 18 17 15 21 21 C 1.38214 * 119.97581 * 140.86763 * 20 18 17 22 22 C 1.38469 * 120.02656 * 180.27536 * 21 20 18 23 23 F 1.35097 * 120.01368 * 179.71948 * 22 21 20 24 24 C 1.38428 * 119.97216 * 359.46885 * 22 21 20 25 25 C 1.38411 * 119.95074 * 0.50582 * 24 22 21 26 26 F 1.35102 * 120.01468 * 179.76621 * 25 24 22 27 27 C 1.38213 * 119.97847 * 320.84001 * 20 18 17 28 28 C 1.53780 * 87.17112 * 25.36239 * 18 17 15 29 29 C 1.40412 * 119.90533 * 0.27050 * 11 10 9 30 30 O 1.35680 * 120.13688 * 179.70246 * 29 11 10 31 31 C 1.38280 * 119.71988 * 359.43216 * 29 11 10 32 32 O 1.34232 * 125.65148 * 245.33089 * 4 2 1 33 33 H 0.96706 * 113.99933 * 59.99341 * 1 2 3 34 34 H 1.09004 * 109.47257 * 239.99999 * 2 1 3 35 35 H 1.48494 * 109.99767 * 298.68378 * 3 2 1 36 36 H 1.48500 * 109.99736 * 60.00098 * 3 2 1 37 37 H 1.08007 * 126.47253 * 0.03192 * 5 4 2 38 38 H 1.07998 * 126.63004 * 179.97438 * 6 5 4 39 39 H 1.07999 * 119.85838 * 359.97438 * 9 8 7 40 40 H 1.08008 * 119.90408 * 180.02562 * 10 9 8 41 41 H 0.97000 * 120.00668 * 0.02562 * 14 12 11 42 42 H 1.09002 * 113.66480 * 334.66218 * 17 15 14 43 43 H 1.09001 * 113.61360 * 203.70986 * 17 15 14 44 44 H 1.08002 * 119.98320 * 359.97438 * 21 20 18 45 45 H 1.08002 * 120.02147 * 180.24889 * 24 22 21 46 46 H 1.07999 * 119.98150 * 0.02562 * 27 20 18 47 47 H 1.08997 * 113.61444 * 89.15768 * 28 18 17 48 48 H 1.09007 * 113.61514 * 220.06042 * 28 18 17 49 49 H 0.96699 * 113.99731 * 90.00445 * 30 29 11 50 50 H 1.08005 * 120.08504 * 180.29414 * 31 29 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7567 -2.0180 1.5093 6 6 2.3800 -2.2628 2.7478 7 6 2.9065 -1.0782 3.1625 8 6 3.6544 -0.8536 4.4145 9 6 3.8753 -1.9170 5.2968 10 6 4.5663 -1.7170 6.4559 11 6 5.0588 -0.4463 6.7708 12 6 5.8050 -0.2338 8.0229 13 8 6.2332 0.8713 8.2956 14 7 6.0132 -1.2642 8.8662 15 6 6.7549 -1.0529 10.1119 16 1 7.4205 -0.1908 10.0671 17 6 5.8673 -1.0861 11.3692 18 6 6.1240 -2.6018 11.4125 19 1 5.4002 -3.1837 10.8419 20 6 6.3392 -3.1381 12.8043 21 6 5.8067 -4.3621 13.1627 22 6 5.9990 -4.8533 14.4430 23 9 5.4735 -6.0471 14.7948 24 6 6.7342 -4.1229 15.3607 25 6 7.2675 -2.8975 15.0006 26 9 7.9813 -2.1814 15.8967 27 6 7.0695 -2.4059 13.7213 28 6 7.4305 -2.3253 10.6500 29 6 4.8363 0.6278 5.8942 30 8 5.3067 1.8637 6.1979 31 6 4.1407 0.4194 4.7174 32 8 2.6213 -0.1450 2.2334 33 1 -0.3933 0.4418 -0.7650 34 1 1.7924 -0.5138 -0.8900 35 1 1.5879 2.4585 -1.2242 36 1 1.5616 2.4679 1.2085 37 1 1.2370 -2.7411 0.8981 38 1 2.4298 -3.2076 3.2685 39 1 3.4970 -2.9003 5.0591 40 1 4.7337 -2.5422 7.1323 41 1 5.6721 -2.1458 8.6486 42 1 4.8266 -0.8249 11.1772 43 1 6.2906 -0.5472 12.2169 44 1 5.2362 -4.9334 12.4453 45 1 6.8881 -4.5071 16.3583 46 1 7.4852 -1.4496 13.4401 47 1 8.2819 -2.1258 11.3006 48 1 7.6500 -3.0630 9.8781 49 1 6.1988 2.0370 5.8676 50 1 3.9704 1.2403 4.0365 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:10 Heat of formation + Delta-G solvation = -88.587101 kcal Electronic energy + Delta-G solvation = -38871.329893 eV Core-core repulsion = 33241.440719 eV Total energy + Delta-G solvation = -5629.889174 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.131 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -50.03300 -50.01095 -43.73257 -41.90219 -41.07548 -39.70277 -38.52927 -38.15210 -37.83793 -34.80040 -34.20626 -33.39077 -31.99168 -31.43024 -31.30500 -30.51439 -27.36237 -26.92149 -26.45843 -24.56754 -24.10244 -23.96763 -23.13988 -22.44855 -22.02167 -21.33214 -20.53405 -19.63317 -19.11426 -18.87911 -18.64076 -18.14253 -18.03133 -17.52466 -17.37044 -17.07719 -17.01816 -16.80984 -16.64442 -16.47866 -16.31663 -16.19857 -16.06818 -15.91590 -15.65730 -15.37344 -15.31944 -15.16878 -14.70496 -14.44697 -14.19786 -14.15962 -14.06562 -14.01047 -13.78259 -13.70505 -13.59221 -13.52008 -13.16559 -12.97792 -12.86092 -12.82487 -12.74964 -12.25484 -12.08371 -11.87524 -11.84140 -11.47014 -11.13576 -10.83463 -10.80339 -10.60109 -10.17430 -9.99384 -9.96533 -9.84983 -9.02126 -5.04719 -0.81018 -0.16206 -0.13412 0.08552 0.62776 1.06449 1.32997 1.43140 1.66578 1.90958 1.93344 1.96151 2.18754 2.60841 2.73992 2.97050 3.14359 3.16282 3.26428 3.41688 3.43579 3.47245 3.51809 3.58747 3.67367 3.73674 3.74933 3.81743 3.87938 3.90395 3.93687 3.98578 4.08914 4.18553 4.34580 4.42393 4.52934 4.53449 4.59319 4.64272 4.64723 4.68972 4.71929 4.77116 4.82223 4.84193 4.88154 4.91114 4.94008 4.97260 5.07070 5.15391 5.20660 5.37533 5.43146 5.47286 5.65735 5.98268 6.22052 6.37323 6.67104 7.16270 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.038 4.038 3 Si 0.694 3.306 4 C 0.004 3.996 5 C -0.172 4.172 6 C -0.175 4.175 7 C 0.023 3.977 8 C 0.033 3.967 9 C -0.116 4.116 10 C -0.064 4.064 11 C -0.167 4.167 12 C 0.563 3.437 13 O -0.514 6.514 14 N -0.713 5.713 15 C 0.122 3.878 16 H 0.110 0.890 17 C -0.144 4.144 18 C -0.077 4.077 19 H 0.105 0.895 20 C -0.012 4.012 21 C -0.161 4.161 22 C 0.135 3.865 23 F -0.129 7.129 24 C -0.198 4.198 25 C 0.137 3.863 26 F -0.129 7.129 27 C -0.163 4.163 28 C -0.135 4.135 29 C 0.180 3.820 30 O -0.474 6.474 31 C -0.141 4.141 32 O -0.161 6.161 33 H 0.388 0.612 34 H 0.099 0.901 35 H -0.251 1.251 36 H -0.250 1.250 37 H 0.155 0.845 38 H 0.157 0.843 39 H 0.139 0.861 40 H 0.136 0.864 41 H 0.399 0.601 42 H 0.079 0.921 43 H 0.098 0.902 44 H 0.143 0.857 45 H 0.149 0.851 46 H 0.145 0.855 47 H 0.102 0.898 48 H 0.081 0.919 49 H 0.399 0.601 50 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.931 -4.068 -5.438 7.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.147 4.147 3 Si 0.593 3.407 4 C -0.046 4.046 5 C -0.191 4.191 6 C -0.194 4.194 7 C -0.027 4.027 8 C 0.033 3.967 9 C -0.134 4.134 10 C -0.083 4.083 11 C -0.170 4.170 12 C 0.350 3.650 13 O -0.390 6.390 14 N -0.365 5.365 15 C 0.016 3.984 16 H 0.128 0.872 17 C -0.183 4.183 18 C -0.095 4.095 19 H 0.123 0.877 20 C -0.013 4.013 21 C -0.180 4.180 22 C 0.116 3.884 23 F -0.108 7.108 24 C -0.217 4.217 25 C 0.117 3.883 26 F -0.107 7.107 27 C -0.182 4.182 28 C -0.173 4.173 29 C 0.133 3.867 30 O -0.286 6.286 31 C -0.160 4.160 32 O -0.058 6.058 33 H 0.238 0.762 34 H 0.116 0.884 35 H -0.175 1.175 36 H -0.174 1.174 37 H 0.173 0.827 38 H 0.175 0.825 39 H 0.157 0.843 40 H 0.153 0.847 41 H 0.235 0.765 42 H 0.098 0.902 43 H 0.116 0.884 44 H 0.160 0.840 45 H 0.167 0.833 46 H 0.162 0.838 47 H 0.120 0.880 48 H 0.100 0.900 49 H 0.258 0.742 50 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 1.687 -2.346 -4.345 5.218 hybrid contribution -1.024 -1.142 -0.447 1.598 sum 0.662 -3.487 -4.792 5.964 Atomic orbital electron populations 1.86570 1.16853 1.80389 1.50369 1.23812 0.84954 1.12203 0.93722 0.94548 0.91461 0.73517 0.81173 1.21358 0.99961 0.92451 0.90851 1.21539 1.03727 0.95816 0.98028 1.21892 1.01825 0.98408 0.97298 1.20283 1.04084 0.87475 0.90871 1.17752 0.95313 0.93744 0.89939 1.20700 1.00220 0.98766 0.93749 1.20794 0.95590 0.95447 0.96435 1.20447 1.04851 0.94346 0.97399 1.17964 0.79571 0.84428 0.83016 1.90852 1.49548 1.23317 1.75240 1.45581 1.57659 1.12243 1.21044 1.21865 0.94028 0.99488 0.82980 0.87238 1.23630 1.01850 0.94243 0.98541 1.21696 0.99091 0.97028 0.91713 0.87698 1.19313 0.94196 0.92544 0.95200 1.21117 1.03990 0.97506 0.95412 1.17280 0.95703 0.82143 0.93299 1.91561 1.84163 1.42658 1.92401 1.21093 1.02919 0.95616 1.02085 1.17248 0.93681 0.90038 0.87330 1.91566 1.75357 1.77006 1.66788 1.21067 1.02834 1.02388 0.91905 1.23453 0.96774 0.97312 0.99738 1.18282 0.93843 0.84069 0.90488 1.84781 1.36566 1.27470 1.79738 1.21606 1.00302 0.97112 0.96931 1.83923 1.58004 1.37674 1.26198 0.76216 0.88369 1.17530 1.17401 0.82708 0.82534 0.84307 0.84657 0.76480 0.90214 0.88376 0.83951 0.83325 0.83751 0.87997 0.90025 0.74205 0.83798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.18 12.86 -35.23 -0.45 -0.63 16 2 C -0.04 0.03 2.97 36.01 0.11 0.13 16 3 Si 0.69 -0.65 32.11 -169.99 -5.46 -6.11 16 4 C 0.00 0.01 6.24 -35.52 -0.22 -0.22 16 5 C -0.17 -0.15 10.78 -39.82 -0.43 -0.58 16 6 C -0.18 -0.04 10.25 -39.38 -0.40 -0.44 16 7 C 0.02 0.03 7.02 -36.55 -0.26 -0.23 16 8 C 0.03 0.01 5.87 -104.96 -0.62 -0.61 16 9 C -0.12 0.21 9.48 -39.60 -0.38 -0.16 16 10 C -0.06 0.15 9.47 -39.63 -0.38 -0.23 16 11 C -0.17 -0.06 5.89 -104.79 -0.62 -0.68 16 12 C 0.56 0.79 7.75 -12.58 -0.10 0.69 16 13 O -0.51 -2.64 14.74 -16.69 -0.25 -2.88 16 14 N -0.71 1.36 5.21 -54.04 -0.28 1.08 16 15 C 0.12 -0.24 4.33 -67.03 -0.29 -0.53 16 16 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 17 C -0.14 0.34 7.27 -25.83 -0.19 0.15 16 18 C -0.08 0.27 3.85 -90.96 -0.35 -0.08 16 19 H 0.10 -0.50 8.08 -51.93 -0.42 -0.92 16 20 C -0.01 0.02 5.29 -104.64 -0.55 -0.53 16 21 C -0.16 0.19 9.69 -39.51 -0.38 -0.20 16 22 C 0.14 0.06 7.30 -39.43 -0.29 -0.23 16 23 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 24 C -0.20 -0.08 10.01 -39.45 -0.39 -0.47 16 25 C 0.14 0.07 7.30 -39.43 -0.29 -0.22 16 26 F -0.13 -0.23 17.27 2.25 0.04 -0.19 16 27 C -0.16 0.18 8.51 -39.50 -0.34 -0.16 16 28 C -0.13 0.51 7.29 -25.92 -0.19 0.32 16 29 C 0.18 0.26 6.71 -38.75 -0.26 0.00 16 30 O -0.47 -1.04 11.56 -40.70 -0.47 -1.51 16 31 C -0.14 -0.12 9.65 -39.06 -0.38 -0.49 16 32 O -0.16 -0.34 8.79 4.71 0.04 -0.30 16 33 H 0.39 -1.60 8.74 45.56 0.40 -1.20 16 34 H 0.10 -0.33 7.96 -51.93 -0.41 -0.74 16 35 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 36 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 37 H 0.16 -0.09 8.06 -52.48 -0.42 -0.52 16 38 H 0.16 -0.38 7.24 -52.49 -0.38 -0.76 16 39 H 0.14 -0.58 6.95 -52.49 -0.36 -0.94 16 40 H 0.14 -0.76 6.38 -52.48 -0.33 -1.09 16 41 H 0.40 -1.86 6.71 -40.82 -0.27 -2.13 16 42 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 43 H 0.10 -0.25 6.39 -51.93 -0.33 -0.58 16 44 H 0.14 -0.41 8.05 -52.49 -0.42 -0.83 16 45 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 46 H 0.14 -0.36 6.72 -52.49 -0.35 -0.71 16 47 H 0.10 -0.39 7.64 -51.93 -0.40 -0.79 16 48 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 49 H 0.40 -0.69 9.06 45.56 0.41 -0.28 16 50 H 0.14 0.05 7.90 -52.48 -0.41 -0.36 16 LS Contribution 434.63 15.07 6.55 6.55 Total: 0.00 -11.06 434.63 -11.99 -23.06 By element: Atomic # 1 Polarization: -9.54 SS G_CDS: -4.57 Total: -14.11 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -7.18 Total: -4.77 kcal Atomic # 7 Polarization: 1.36 SS G_CDS: -0.28 Total: 1.08 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -1.13 Total: -5.32 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.08 Total: -0.37 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.46 Total: -6.11 kcal Total LS contribution 6.55 Total: 6.55 kcal Total: -11.06 -11.99 -23.06 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.532 kcal (2) G-P(sol) polarization free energy of solvation -11.062 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.594 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.993 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.055 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.587 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds