Wall clock time and date at job start Tue Mar 9 2021 13:09:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.46537 * 2 1 4 4 C 1.50701 * 109.47247 * 119.99860 * 2 1 3 5 5 C 1.38576 * 120.32254 * 65.00003 * 4 2 1 6 6 C 1.38633 * 118.48666 * 180.02562 * 5 4 2 7 7 C 1.39268 * 119.06039 * 0.02562 * 6 5 4 8 8 C 1.48172 * 119.72043 * 179.97438 * 7 6 5 9 9 O 1.21511 * 119.99943 * 359.97438 * 8 7 6 10 10 N 1.34776 * 119.99757 * 180.02562 * 8 7 6 11 11 C 1.46502 * 120.00096 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.84509 * 336.19324 * 11 10 8 13 13 C 1.53779 * 113.69204 * 107.45899 * 11 10 8 14 14 C 1.53789 * 87.07856 * 89.12909 * 13 11 10 15 15 H 1.08989 * 113.68722 * 270.86772 * 14 13 11 16 16 C 1.50701 * 113.61095 * 139.97888 * 14 13 11 17 17 C 1.38208 * 119.97603 * 322.47918 * 16 14 13 18 18 C 1.38476 * 120.02410 * 179.97438 * 17 16 14 19 19 F 1.35101 * 120.01215 * 180.29629 * 18 17 16 20 20 C 1.38425 * 119.97328 * 0.02562 * 18 17 16 21 21 C 1.38412 * 119.95050 * 359.97438 * 20 18 17 22 22 F 1.35097 * 120.01227 * 180.02562 * 21 20 18 23 23 C 1.38206 * 119.97054 * 142.49967 * 16 14 13 24 24 C 1.53775 * 113.61420 * 204.99781 * 11 10 8 25 25 N 1.32743 * 120.55449 * 0.27094 * 7 6 5 26 26 C 1.31491 * 121.64514 * 359.42967 * 25 7 6 27 27 H 0.96698 * 114.00641 * 299.99741 * 1 2 3 28 28 H 1.08991 * 109.47163 * 240.00500 * 2 1 3 29 29 H 1.48504 * 109.99740 * 178.68116 * 3 2 1 30 30 H 1.48502 * 110.00310 * 299.99857 * 3 2 1 31 31 H 1.07996 * 120.75846 * 0.02562 * 5 4 2 32 32 H 1.07997 * 120.47015 * 179.97438 * 6 5 4 33 33 H 0.97005 * 119.99925 * 359.97438 * 10 8 7 34 34 H 1.08990 * 113.61578 * 334.57908 * 13 11 10 35 35 H 1.09000 * 113.61286 * 203.67262 * 13 11 10 36 36 H 1.08001 * 119.98837 * 0.02562 * 17 16 14 37 37 H 1.08000 * 120.02498 * 179.97438 * 20 18 17 38 38 H 1.07994 * 119.99231 * 0.02562 * 23 16 14 39 39 H 1.09004 * 113.61560 * 156.24710 * 24 11 10 40 40 H 1.09003 * 113.69152 * 25.35850 * 24 11 10 41 41 H 1.07999 * 119.55304 * 180.26940 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6880 -2.0633 1.4056 6 6 2.1671 -2.6784 2.5520 7 6 2.8720 -1.9192 3.4828 8 6 3.3902 -2.5616 4.7133 9 8 3.1991 -3.7458 4.9072 10 7 4.0727 -1.8321 5.6181 11 6 4.5855 -2.4672 6.8346 12 1 4.0354 -3.3683 7.1057 13 6 6.1121 -2.6530 6.8382 14 6 6.2020 -1.2527 7.4677 15 1 6.2641 -0.4470 6.7363 16 6 7.2457 -1.1431 8.5492 17 6 7.4545 -2.1984 9.4169 18 6 8.4136 -2.0989 10.4108 19 9 8.6216 -3.1329 11.2551 20 6 9.1630 -0.9418 10.5353 21 6 8.9530 0.1144 9.6658 22 9 9.6841 1.2442 9.7858 23 6 7.9930 0.0129 8.6729 24 6 4.7806 -1.4890 8.0049 25 7 3.0785 -0.6238 3.2795 26 6 2.6402 -0.0166 2.1987 27 1 -0.3934 0.4416 0.7650 28 1 1.7923 -0.5137 -0.8900 29 1 3.5345 1.7704 0.0321 30 1 1.5613 2.4680 -1.2085 31 1 1.1376 -2.6258 0.6660 32 1 1.9955 -3.7311 2.7212 33 1 4.2249 -0.8866 5.4634 34 1 6.5471 -2.7120 5.8406 35 1 6.4532 -3.4509 7.4977 36 1 6.8699 -3.1013 9.3193 37 1 9.9110 -0.8631 11.3104 38 1 7.8286 0.8372 7.9948 39 1 4.7578 -1.9687 8.9834 40 1 4.1412 -0.6079 7.9505 41 1 2.8311 1.0381 2.0657 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:41 Heat of formation + Delta-G solvation = -61.401162 kcal Electronic energy + Delta-G solvation = -28463.919960 eV Core-core repulsion = 23947.364170 eV Total energy + Delta-G solvation = -4516.555790 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.112 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -50.01977 -49.99959 -42.06125 -41.40019 -40.06001 -38.68982 -37.98238 -34.82519 -33.72867 -33.04095 -31.94642 -31.38008 -28.12650 -26.91225 -26.53678 -25.12271 -24.25083 -23.86497 -22.99726 -22.06712 -20.48732 -19.44847 -18.88899 -18.67066 -18.13150 -17.79615 -17.50631 -17.01100 -16.99801 -16.80010 -16.65042 -16.47333 -16.34694 -16.30385 -15.99555 -15.70255 -15.43932 -15.32090 -14.92163 -14.60132 -14.43186 -14.31824 -14.08154 -13.76455 -13.67532 -13.65391 -13.15590 -12.96832 -12.83465 -12.69763 -12.25358 -12.21085 -11.83837 -11.50316 -11.38118 -11.13902 -10.75008 -10.69998 -10.39587 -10.14620 -9.95719 -9.83524 -5.22488 -0.64435 -0.14642 -0.11924 -0.01499 1.05162 1.44819 1.55695 1.81382 1.87277 2.20288 2.62218 2.75288 2.85562 3.16193 3.20742 3.28407 3.36974 3.44190 3.47936 3.56463 3.64923 3.69359 3.73656 3.83287 3.85369 3.93128 4.00681 4.06122 4.24564 4.44175 4.46066 4.53783 4.60585 4.63831 4.68308 4.73278 4.79285 4.83972 4.88879 4.90746 4.92093 4.96838 5.22402 5.28312 5.45191 5.67238 6.23870 6.33424 6.54679 7.05846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.686 3.314 4 C -0.149 4.149 5 C -0.053 4.053 6 C -0.107 4.107 7 C 0.080 3.920 8 C 0.576 3.424 9 O -0.525 6.525 10 N -0.694 5.694 11 C 0.118 3.882 12 H 0.110 0.890 13 C -0.144 4.144 14 C -0.077 4.077 15 H 0.107 0.893 16 C -0.012 4.012 17 C -0.164 4.164 18 C 0.136 3.864 19 F -0.129 7.129 20 C -0.198 4.198 21 C 0.135 3.865 22 F -0.129 7.129 23 C -0.161 4.161 24 C -0.134 4.134 25 N -0.453 5.453 26 C 0.105 3.895 27 H 0.381 0.619 28 H 0.120 0.880 29 H -0.252 1.252 30 H -0.249 1.249 31 H 0.148 0.852 32 H 0.153 0.847 33 H 0.413 0.587 34 H 0.079 0.921 35 H 0.099 0.901 36 H 0.145 0.855 37 H 0.149 0.851 38 H 0.143 0.857 39 H 0.102 0.898 40 H 0.083 0.917 41 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.182 3.470 -0.797 4.176 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.179 4.179 3 Si 0.587 3.413 4 C -0.152 4.152 5 C -0.078 4.078 6 C -0.128 4.128 7 C -0.058 4.058 8 C 0.361 3.639 9 O -0.400 6.400 10 N -0.345 5.345 11 C 0.012 3.988 12 H 0.128 0.872 13 C -0.182 4.182 14 C -0.095 4.095 15 H 0.125 0.875 16 C -0.012 4.012 17 C -0.182 4.182 18 C 0.117 3.883 19 F -0.107 7.107 20 C -0.217 4.217 21 C 0.116 3.884 22 F -0.108 7.108 23 C -0.180 4.180 24 C -0.172 4.172 25 N -0.164 5.164 26 C -0.055 4.055 27 H 0.229 0.771 28 H 0.138 0.862 29 H -0.177 1.177 30 H -0.173 1.173 31 H 0.166 0.834 32 H 0.171 0.829 33 H 0.249 0.751 34 H 0.098 0.902 35 H 0.117 0.883 36 H 0.163 0.837 37 H 0.167 0.833 38 H 0.161 0.839 39 H 0.120 0.880 40 H 0.101 0.899 41 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -1.238 3.345 -0.921 3.684 hybrid contribution 0.063 -0.527 -0.659 0.846 sum -1.176 2.818 -1.580 3.438 Atomic orbital electron populations 1.86545 1.16542 1.81668 1.49332 1.25053 0.85619 1.10450 0.96729 0.94839 0.81245 0.77210 0.88016 1.21667 0.99375 0.95859 0.98290 1.21571 0.95783 0.93754 0.96736 1.22235 0.95236 1.02342 0.92951 1.21121 0.98687 0.90256 0.95748 1.17839 0.77849 0.85931 0.82247 1.90827 1.57805 1.14773 1.76611 1.45483 1.55122 1.13772 1.20160 1.21899 0.94900 0.97599 0.84375 0.87197 1.23597 0.96124 0.96191 1.02299 1.21705 0.92868 0.99426 0.95533 0.87497 1.19315 0.95084 0.91832 0.94989 1.21070 0.99989 1.01184 0.95986 1.17252 0.96459 0.84627 0.89997 1.91564 1.93937 1.56215 1.69029 1.21088 1.04294 0.93080 1.03274 1.17281 0.92166 0.82824 0.96154 1.91560 1.75453 1.48442 1.95327 1.21128 0.97196 0.99925 0.99721 1.23439 0.95030 1.00192 0.98521 1.67494 1.18129 1.09456 1.21334 1.22598 0.94281 0.99744 0.88841 0.77118 0.86229 1.17696 1.17330 0.83445 0.82923 0.75055 0.90247 0.88284 0.83747 0.83341 0.83897 0.87963 0.89866 0.81872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.97 12.84 -35.23 -0.45 0.52 16 2 C -0.07 0.16 2.82 36.01 0.10 0.27 16 3 Si 0.69 -2.15 29.83 -169.99 -5.07 -7.22 16 4 C -0.15 0.27 5.37 -104.36 -0.56 -0.29 16 5 C -0.05 0.06 9.83 -39.31 -0.39 -0.33 16 6 C -0.11 -0.01 9.63 -39.05 -0.38 -0.39 16 7 C 0.08 0.07 6.75 -83.01 -0.56 -0.49 16 8 C 0.58 1.02 7.81 -12.18 -0.10 0.92 16 9 O -0.53 -2.50 15.92 5.36 0.09 -2.42 16 10 N -0.69 0.59 5.26 -53.86 -0.28 0.31 16 11 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 12 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 13 C -0.14 0.32 7.26 -25.92 -0.19 0.13 16 14 C -0.08 0.23 3.86 -90.96 -0.35 -0.12 16 15 H 0.11 -0.41 8.09 -51.94 -0.42 -0.83 16 16 C -0.01 0.02 5.29 -104.64 -0.55 -0.53 16 17 C -0.16 0.16 8.59 -39.50 -0.34 -0.18 16 18 C 0.14 0.08 7.30 -39.42 -0.29 -0.21 16 19 F -0.13 -0.23 17.27 2.25 0.04 -0.19 16 20 C -0.20 -0.10 10.01 -39.45 -0.39 -0.49 16 21 C 0.14 0.08 7.30 -39.43 -0.29 -0.21 16 22 F -0.13 -0.24 17.27 2.25 0.04 -0.20 16 23 C -0.16 0.15 9.69 -39.50 -0.38 -0.24 16 24 C -0.13 0.44 7.29 -25.92 -0.19 0.25 16 25 N -0.45 0.08 9.54 -9.80 -0.09 -0.02 16 26 C 0.10 -0.18 9.84 -17.56 -0.17 -0.35 16 27 H 0.38 -2.14 8.70 45.56 0.40 -1.74 16 28 H 0.12 -0.26 7.96 -51.93 -0.41 -0.68 16 29 H -0.25 0.21 7.11 56.52 0.40 0.61 16 30 H -0.25 -0.10 7.11 56.52 0.40 0.31 16 31 H 0.15 -0.36 8.06 -52.49 -0.42 -0.78 16 32 H 0.15 -0.03 7.64 -52.49 -0.40 -0.43 16 33 H 0.41 -0.95 8.03 -40.82 -0.33 -1.27 16 34 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.10 -0.27 6.31 -51.93 -0.33 -0.59 16 36 H 0.14 -0.36 6.66 -52.49 -0.35 -0.71 16 37 H 0.15 -0.08 8.06 -52.49 -0.42 -0.50 16 38 H 0.14 -0.36 8.05 -52.49 -0.42 -0.78 16 39 H 0.10 -0.37 7.72 -51.93 -0.40 -0.77 16 40 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 41 H 0.16 -0.69 4.92 -52.49 -0.26 -0.95 16 LS Contribution 359.02 15.07 5.41 5.41 Total: 0.00 -7.50 359.02 -9.84 -17.34 By element: Atomic # 1 Polarization: -6.59 SS G_CDS: -4.20 Total: -10.79 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: -5.31 Total: -2.74 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.38 Total: 0.29 kcal Atomic # 8 Polarization: -1.53 SS G_CDS: -0.37 Total: -1.90 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.08 Total: -0.39 kcal Atomic # 14 Polarization: -2.15 SS G_CDS: -5.07 Total: -7.22 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -7.50 -9.84 -17.34 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.064 kcal (2) G-P(sol) polarization free energy of solvation -7.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.561 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.840 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.338 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.401 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds