Wall clock time and date at job start Tue Mar 9 2021 13:10:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86294 * 109.47035 * 2 1 4 4 C 1.50700 * 109.47263 * 239.99614 * 2 1 3 5 5 C 1.33737 * 125.12441 * 300.00490 * 4 2 1 6 6 C 1.37793 * 115.08233 * 179.97438 * 5 4 2 7 7 C 1.34977 * 114.70213 * 359.97438 * 6 5 4 8 8 C 1.47566 * 125.27511 * 179.97438 * 7 6 5 9 9 C 1.39815 * 119.99630 * 179.97438 * 8 7 6 10 10 C 1.36570 * 119.99951 * 180.02562 * 9 8 7 11 11 C 1.39832 * 119.99526 * 0.25927 * 10 9 8 12 12 C 1.47563 * 119.99684 * 179.71737 * 11 10 9 13 13 O 1.21593 * 119.99945 * 359.97438 * 12 11 10 14 14 N 1.34777 * 119.99789 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00059 * 180.02562 * 14 12 11 16 16 H 1.08997 * 112.84715 * 336.19529 * 15 14 12 17 17 C 1.53782 * 113.61180 * 107.49816 * 15 14 12 18 18 C 1.53786 * 87.07991 * 89.12028 * 17 15 14 19 19 H 1.08993 * 113.60885 * 270.88013 * 18 17 15 20 20 C 1.50698 * 113.61411 * 139.97872 * 18 17 15 21 21 C 1.38205 * 119.97718 * 322.22200 * 20 18 17 22 22 C 1.38478 * 120.02734 * 179.76588 * 21 20 18 23 23 F 1.35097 * 120.01518 * 180.25234 * 22 21 20 24 24 C 1.38416 * 119.96905 * 0.49151 * 22 21 20 25 25 C 1.38417 * 119.95241 * 359.76666 * 24 22 21 26 26 F 1.35099 * 120.01265 * 180.02562 * 25 24 22 27 27 C 1.38210 * 119.97066 * 142.50078 * 20 18 17 28 28 C 1.53774 * 113.61446 * 204.99845 * 15 14 12 29 29 C 1.39830 * 119.99746 * 359.40005 * 11 10 9 30 30 C 1.36557 * 120.00252 * 0.64362 * 29 11 10 31 31 S 1.75866 * 125.11550 * 120.30313 * 4 2 1 32 32 H 0.96698 * 114.00424 * 299.99779 * 1 2 3 33 33 H 1.09002 * 109.46908 * 119.99745 * 2 1 3 34 34 H 1.48506 * 110.00215 * 178.68088 * 3 2 1 35 35 H 1.48500 * 110.00211 * 299.99821 * 3 2 1 36 36 H 1.08003 * 122.45716 * 0.02562 * 5 4 2 37 37 H 1.08004 * 122.64717 * 179.97438 * 6 5 4 38 38 H 1.07999 * 120.00105 * 0.02562 * 9 8 7 39 39 H 1.08002 * 119.99809 * 179.97438 * 10 9 8 40 40 H 0.97000 * 119.99894 * 359.97438 * 14 12 11 41 41 H 1.09006 * 113.61131 * 203.66201 * 17 15 14 42 42 H 1.08998 * 113.61815 * 334.56557 * 17 15 14 43 43 H 1.08006 * 119.98660 * 0.02562 * 21 20 18 44 44 H 1.08006 * 120.02086 * 179.78537 * 24 22 21 45 45 H 1.08002 * 119.98889 * 359.97438 * 27 20 18 46 46 H 1.08998 * 113.61501 * 25.42955 * 28 15 14 47 47 H 1.09007 * 113.61444 * 156.25173 * 28 15 14 48 48 H 1.08005 * 120.00006 * 180.32234 * 29 11 10 49 49 H 1.07991 * 120.00680 * 179.68154 * 30 29 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6721 -1.9847 -1.5429 6 6 2.2372 -2.4240 -2.7203 7 6 2.9660 -1.4967 -3.3767 8 6 3.6712 -1.7148 -4.6544 9 6 4.3962 -0.6723 -5.2395 10 6 5.0484 -0.8740 -6.4224 11 6 4.9866 -2.1215 -7.0509 12 6 5.6862 -2.3376 -8.3320 13 8 6.3160 -1.4307 -8.8414 14 7 5.6262 -3.5399 -8.9381 15 6 6.3212 -3.7547 -10.2098 16 1 6.4892 -2.8300 -10.7617 17 6 7.5748 -4.6366 -10.0853 18 6 6.6530 -5.8442 -10.3241 19 1 6.2267 -6.2556 -9.4092 20 6 7.2577 -6.8983 -11.2153 21 6 8.0350 -6.5262 -12.2957 22 6 8.5952 -7.4941 -13.1124 23 9 9.3592 -7.1302 -14.1655 24 6 8.3678 -8.8344 -12.8523 25 6 7.5847 -9.2058 -11.7730 26 9 7.3625 -10.5137 -11.5177 27 6 7.0297 -8.2363 -10.9548 28 6 5.7109 -4.8791 -11.0630 29 6 4.2674 -3.1661 -6.4620 30 6 3.6145 -2.9642 -5.2798 31 16 2.9529 0.0092 -2.4679 32 1 -0.3934 0.4416 0.7650 33 1 1.7923 -0.5138 0.8900 34 1 3.5346 1.7703 0.0321 35 1 1.5614 2.4679 -1.2085 36 1 1.0638 -2.6224 -0.9186 37 1 2.1074 -3.4309 -3.0888 38 1 4.4404 0.2925 -4.7561 39 1 5.6081 -0.0685 -6.8745 40 1 5.1234 -4.2633 -8.5320 41 1 8.3014 -4.4776 -10.8822 42 1 8.0239 -4.6196 -9.0922 43 1 8.2092 -5.4801 -12.5006 44 1 8.8015 -9.5899 -13.4908 45 1 6.4186 -8.5259 -10.1126 46 1 4.6552 -5.0579 -10.8592 47 1 5.9267 -4.7856 -12.1275 48 1 4.2239 -4.1313 -6.9449 49 1 3.0547 -3.7694 -4.8275 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:03 Heat of formation + Delta-G solvation = -38.072025 kcal Electronic energy + Delta-G solvation = -35577.071262 eV Core-core repulsion = 30392.125457 eV Total energy + Delta-G solvation = -5184.945805 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.104 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -50.04241 -50.02130 -41.87685 -40.94164 -39.87520 -39.08482 -38.53643 -37.46599 -34.84747 -33.54858 -32.43929 -31.90980 -31.41051 -30.56308 -27.54080 -26.94242 -26.52410 -24.78603 -24.10894 -23.94345 -23.48928 -22.96820 -21.87241 -20.55065 -20.17528 -19.25385 -18.89484 -18.62528 -18.31348 -18.15147 -17.53482 -17.26133 -17.07680 -17.02765 -16.75665 -16.32645 -16.29612 -16.21049 -16.11676 -15.80859 -15.64483 -15.42955 -15.32896 -15.16203 -14.96172 -14.65913 -14.49692 -14.31296 -14.16987 -14.13211 -13.79907 -13.70785 -13.42859 -13.24690 -13.18713 -13.11964 -12.98068 -12.85005 -12.68180 -12.36145 -12.27418 -12.13054 -11.86632 -11.81138 -11.49186 -11.03554 -10.83576 -10.43622 -10.27417 -10.21160 -9.98589 -9.86091 -9.60269 -9.07654 -5.32436 -0.94071 -0.17279 -0.14506 0.19583 0.26263 0.38104 0.72022 1.10639 1.45847 1.56303 1.83430 1.93199 1.94801 2.17672 2.72909 2.77662 3.12787 3.24543 3.25195 3.35509 3.40843 3.45784 3.56896 3.61073 3.66188 3.70237 3.72217 3.74371 3.80773 3.88478 3.97345 4.09019 4.21378 4.24074 4.36174 4.40798 4.44990 4.51241 4.53004 4.58086 4.62980 4.67508 4.70896 4.81127 4.81390 4.86581 4.89833 4.91614 4.93504 5.03070 5.14620 5.19538 5.21354 5.23271 5.40569 5.43352 5.64642 5.65019 6.34166 6.45982 7.10343 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.034 4.034 3 Si 0.668 3.332 4 C -0.173 4.173 5 C -0.099 4.099 6 C -0.117 4.117 7 C -0.146 4.146 8 C 0.015 3.985 9 C -0.121 4.121 10 C -0.048 4.048 11 C -0.137 4.137 12 C 0.564 3.436 13 O -0.530 6.530 14 N -0.710 5.710 15 C 0.120 3.880 16 H 0.110 0.890 17 C -0.144 4.144 18 C -0.077 4.077 19 H 0.105 0.895 20 C -0.012 4.012 21 C -0.163 4.163 22 C 0.137 3.863 23 F -0.129 7.129 24 C -0.197 4.197 25 C 0.135 3.865 26 F -0.129 7.129 27 C -0.161 4.161 28 C -0.135 4.135 29 C -0.077 4.077 30 C -0.109 4.109 31 S 0.113 5.887 32 H 0.385 0.615 33 H 0.085 0.915 34 H -0.238 1.238 35 H -0.235 1.235 36 H 0.148 0.852 37 H 0.148 0.852 38 H 0.129 0.871 39 H 0.142 0.858 40 H 0.401 0.599 41 H 0.099 0.901 42 H 0.079 0.921 43 H 0.145 0.855 44 H 0.149 0.851 45 H 0.143 0.857 46 H 0.081 0.919 47 H 0.102 0.898 48 H 0.130 0.870 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.346 -0.719 5.666 6.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.147 4.147 3 Si 0.567 3.433 4 C -0.290 4.290 5 C -0.130 4.130 6 C -0.148 4.148 7 C -0.263 4.263 8 C 0.013 3.987 9 C -0.140 4.140 10 C -0.066 4.066 11 C -0.141 4.141 12 C 0.352 3.648 13 O -0.406 6.406 14 N -0.362 5.362 15 C 0.015 3.985 16 H 0.128 0.872 17 C -0.182 4.182 18 C -0.095 4.095 19 H 0.123 0.877 20 C -0.013 4.013 21 C -0.182 4.182 22 C 0.117 3.883 23 F -0.107 7.107 24 C -0.217 4.217 25 C 0.116 3.884 26 F -0.108 7.108 27 C -0.180 4.180 28 C -0.173 4.173 29 C -0.096 4.096 30 C -0.129 4.129 31 S 0.380 5.620 32 H 0.233 0.767 33 H 0.103 0.897 34 H -0.162 1.162 35 H -0.158 1.158 36 H 0.166 0.834 37 H 0.165 0.835 38 H 0.147 0.853 39 H 0.160 0.840 40 H 0.237 0.763 41 H 0.117 0.883 42 H 0.098 0.902 43 H 0.163 0.837 44 H 0.167 0.833 45 H 0.161 0.839 46 H 0.100 0.900 47 H 0.120 0.880 48 H 0.148 0.852 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -1.649 1.660 4.089 4.711 hybrid contribution -0.758 -2.682 0.183 2.793 sum -2.407 -1.022 4.272 5.009 Atomic orbital electron populations 1.86506 1.16750 1.81821 1.49857 1.23969 0.85889 1.09628 0.95251 0.94882 0.82016 0.78218 0.88229 1.23739 1.06576 0.97817 1.00897 1.19990 1.00768 0.94781 0.97414 1.20382 0.98616 1.00505 0.95294 1.23095 1.06140 0.97774 0.99289 1.18306 0.95115 0.94127 0.91164 1.20973 0.98048 0.98703 0.96235 1.20945 0.95890 0.96324 0.93470 1.19975 1.02346 0.95595 0.96162 1.18197 0.80109 0.82220 0.84318 1.90817 1.42115 1.42201 1.65505 1.45572 1.53643 1.13561 1.23448 1.21854 0.92650 0.99251 0.84790 0.87208 1.23604 0.96902 0.93912 1.03827 1.21695 0.97586 0.92386 0.97851 0.87673 1.19301 0.94661 0.93192 0.94102 1.21072 1.00734 1.00235 0.96174 1.17249 0.92827 0.92170 0.86041 1.91565 1.72755 1.92218 1.54167 1.21094 1.03912 0.96222 1.00469 1.17277 0.97554 0.78396 0.95183 1.91562 1.92901 1.32795 1.93515 1.21116 1.03387 0.91888 1.01630 1.23452 0.99738 0.93857 1.00234 1.20946 0.95414 0.98087 0.95158 1.20868 1.00222 0.96305 0.95522 1.84241 1.49040 1.13779 1.14977 0.76672 0.89718 1.16216 1.15838 0.83436 0.83474 0.85323 0.84019 0.76329 0.88315 0.90213 0.83744 0.83308 0.83949 0.90020 0.87951 0.85183 0.84718 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.27 12.83 -35.23 -0.45 -0.19 16 2 C -0.03 0.02 2.95 36.01 0.11 0.13 16 3 Si 0.67 -0.84 30.96 -169.99 -5.26 -6.10 16 4 C -0.17 -0.30 5.76 -35.89 -0.21 -0.51 16 5 C -0.10 -0.11 10.00 -41.32 -0.41 -0.53 16 6 C -0.12 -0.08 9.64 -40.90 -0.39 -0.47 16 7 C -0.15 -0.24 6.37 -36.94 -0.24 -0.47 16 8 C 0.01 0.02 5.88 -104.91 -0.62 -0.60 16 9 C -0.12 -0.16 9.54 -39.59 -0.38 -0.53 16 10 C -0.05 -0.07 9.53 -39.59 -0.38 -0.45 16 11 C -0.14 -0.11 5.88 -104.90 -0.62 -0.73 16 12 C 0.56 1.00 7.76 -12.46 -0.10 0.91 16 13 O -0.53 -2.97 15.93 5.28 0.08 -2.88 16 14 N -0.71 1.07 5.21 -54.05 -0.28 0.79 16 15 C 0.12 -0.20 4.32 -67.12 -0.29 -0.49 16 16 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 17 C -0.14 0.33 7.25 -25.92 -0.19 0.15 16 18 C -0.08 0.26 3.85 -90.96 -0.35 -0.09 16 19 H 0.11 -0.48 8.09 -51.93 -0.42 -0.90 16 20 C -0.01 0.02 5.29 -104.65 -0.55 -0.53 16 21 C -0.16 0.16 8.58 -39.51 -0.34 -0.18 16 22 C 0.14 0.07 7.30 -39.43 -0.29 -0.21 16 23 F -0.13 -0.24 17.27 2.25 0.04 -0.20 16 24 C -0.20 -0.09 10.01 -39.45 -0.39 -0.48 16 25 C 0.14 0.07 7.30 -39.43 -0.29 -0.22 16 26 F -0.13 -0.22 17.27 2.25 0.04 -0.19 16 27 C -0.16 0.17 9.69 -39.50 -0.38 -0.21 16 28 C -0.13 0.46 7.29 -25.92 -0.19 0.27 16 29 C -0.08 0.11 9.48 -39.59 -0.38 -0.27 16 30 C -0.11 0.09 9.48 -39.59 -0.38 -0.29 16 31 S 0.11 0.25 19.46 -107.50 -2.09 -1.84 16 32 H 0.39 -2.17 8.74 45.56 0.40 -1.77 16 33 H 0.09 -0.21 7.96 -51.93 -0.41 -0.63 16 34 H -0.24 -0.23 7.11 56.52 0.40 0.17 16 35 H -0.23 -0.46 7.11 56.52 0.40 -0.05 16 36 H 0.15 -0.04 8.06 -52.48 -0.42 -0.47 16 37 H 0.15 -0.27 6.88 -52.48 -0.36 -0.63 16 38 H 0.13 0.07 7.26 -52.49 -0.38 -0.31 16 39 H 0.14 0.22 7.64 -52.49 -0.40 -0.18 16 40 H 0.40 -1.68 6.71 -40.82 -0.27 -1.95 16 41 H 0.10 -0.26 6.32 -51.93 -0.33 -0.58 16 42 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.14 -0.35 6.67 -52.48 -0.35 -0.70 16 44 H 0.15 -0.08 8.06 -52.48 -0.42 -0.51 16 45 H 0.14 -0.40 8.05 -52.49 -0.42 -0.82 16 46 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 47 H 0.10 -0.36 7.72 -51.93 -0.40 -0.76 16 48 H 0.13 -0.60 6.38 -52.48 -0.34 -0.94 16 49 H 0.14 -0.40 6.74 -52.49 -0.35 -0.75 16 LS Contribution 431.33 15.07 6.50 6.50 Total: 0.00 -9.37 431.33 -13.99 -23.36 By element: Atomic # 1 Polarization: -8.12 SS G_CDS: -5.32 Total: -13.44 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -7.24 Total: -5.82 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.28 Total: 0.79 kcal Atomic # 8 Polarization: -2.70 SS G_CDS: -0.37 Total: -3.07 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.08 Total: -0.38 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.26 Total: -6.10 kcal Atomic # 16 Polarization: 0.25 SS G_CDS: -2.09 Total: -1.84 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -9.37 -13.99 -23.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.711 kcal (2) G-P(sol) polarization free energy of solvation -9.374 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.085 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.361 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.072 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds