Wall clock time and date at job start Tue Mar 9 2021 13:10:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39055 * 110.99854 * 236.04434 * 2 1 3 5 5 C 1.39197 * 119.93420 * 240.00121 * 4 2 1 6 6 C 1.50699 * 119.96228 * 0.02562 * 5 4 2 7 7 O 1.42898 * 109.47201 * 75.00337 * 6 5 4 8 8 Si 1.86307 * 109.46843 * 194.99986 * 6 5 4 9 9 C 1.37624 * 120.06754 * 179.97438 * 5 4 2 10 10 C 1.39773 * 119.93142 * 0.02562 * 9 5 4 11 11 C 1.47525 * 120.06718 * 179.97438 * 10 9 5 12 12 O 1.21594 * 120.00288 * 359.97438 * 11 10 9 13 13 N 1.34772 * 119.99809 * 180.02562 * 11 10 9 14 14 C 1.46508 * 120.00037 * 179.97438 * 13 11 10 15 15 H 1.09007 * 112.84497 * 25.32884 * 14 13 11 16 16 C 1.53782 * 113.61495 * 156.52351 * 14 13 11 17 17 C 1.53788 * 87.07579 * 89.11840 * 16 14 13 18 18 H 1.08995 * 113.61386 * 270.87808 * 17 16 14 19 19 C 1.50702 * 113.61247 * 140.06350 * 17 16 14 20 20 C 1.38201 * 119.97729 * 299.72583 * 19 17 16 21 21 C 1.38478 * 120.02661 * 179.72732 * 20 19 17 22 22 F 1.35103 * 120.01239 * 180.29390 * 21 20 19 23 23 C 1.38417 * 119.97063 * 0.54216 * 21 20 19 24 24 C 1.38420 * 119.95265 * 359.73168 * 23 21 20 25 25 F 1.35096 * 120.00972 * 179.97438 * 24 23 21 26 26 C 1.38218 * 119.97145 * 119.99564 * 19 17 16 27 27 C 1.53774 * 113.61351 * 254.13771 * 14 13 11 28 28 C 1.39807 * 119.86422 * 0.02562 * 10 9 5 29 29 C 1.37593 * 119.93118 * 359.70284 * 28 10 9 30 30 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 31 31 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 32 32 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 33 33 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 34 34 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 35 35 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 36 36 H 1.08995 * 109.47634 * 314.99596 * 6 5 4 37 37 H 0.96705 * 113.99892 * 299.99215 * 7 6 5 38 38 H 1.48496 * 109.99769 * 298.68074 * 8 6 5 39 39 H 1.48493 * 109.99800 * 59.99873 * 8 6 5 40 40 H 1.07999 * 120.03117 * 180.02562 * 9 5 4 41 41 H 0.97000 * 120.00676 * 359.97438 * 13 11 10 42 42 H 1.08997 * 113.60990 * 203.66047 * 16 14 13 43 43 H 1.08990 * 113.61437 * 334.49042 * 16 14 13 44 44 H 1.08005 * 119.98569 * 359.97438 * 20 19 17 45 45 H 1.07998 * 120.02211 * 179.70291 * 23 21 20 46 46 H 1.07992 * 119.98875 * 0.02562 * 26 19 17 47 47 H 1.09000 * 113.61883 * 25.42367 * 27 14 13 48 48 H 1.08998 * 113.61437 * 156.33535 * 27 14 13 49 49 H 1.08003 * 120.03893 * 180.02562 * 28 10 9 50 50 H 1.08003 * 119.96776 * 180.31648 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7251 -1.0768 5 6 2.7793 -1.8331 -0.8519 6 6 3.1165 -2.2454 0.5578 7 8 1.9812 -2.8757 1.1542 8 14 4.5465 -3.4392 0.5304 9 6 3.2735 -2.5531 -1.9156 10 6 2.9598 -2.1703 -3.2228 11 6 3.4884 -2.9395 -4.3653 12 8 4.1982 -3.9074 -4.1703 13 7 3.1854 -2.5689 -5.6251 14 6 3.7108 -3.3325 -6.7597 15 1 3.9389 -4.3674 -6.5042 16 6 2.8749 -3.1844 -8.0420 17 6 3.7560 -1.9707 -8.3821 18 1 3.3774 -1.0304 -7.9817 19 6 4.1217 -1.8803 -9.8413 20 6 4.8329 -2.9031 -10.4396 21 6 5.1645 -2.8237 -11.7818 22 9 5.8547 -3.8265 -12.3678 23 6 4.7931 -1.7142 -12.5213 24 6 4.0857 -0.6878 -11.9197 25 9 3.7230 0.3959 -12.6403 26 6 3.7502 -0.7719 -10.5789 27 6 4.8478 -2.6182 -7.5093 28 6 2.1449 -1.0563 -3.4454 29 6 1.6492 -0.3439 -2.3777 30 1 -0.3634 -1.0252 0.0708 31 1 -0.3633 0.4513 -0.9233 32 1 -0.3633 0.5740 0.8525 33 1 1.6461 1.8947 0.8901 34 1 3.0851 1.3422 0.0005 35 1 1.6460 1.8948 -0.8900 36 1 3.3898 -1.3645 1.1385 37 1 1.1976 -2.3110 1.2019 38 1 4.1755 -4.6587 -0.2315 39 1 5.7335 -2.7957 -0.0877 40 1 3.9031 -3.4129 -1.7405 41 1 2.6195 -1.7966 -5.7808 42 1 2.9903 -4.0162 -8.7368 43 1 1.8316 -2.9297 -7.8560 44 1 5.1267 -3.7666 -9.8612 45 1 5.0555 -1.6492 -13.5670 46 1 3.1986 0.0289 -10.1092 47 1 5.3964 -1.9053 -6.8937 48 1 5.5015 -3.2955 -8.0589 49 1 1.9003 -0.7583 -4.4543 50 1 1.0155 0.5137 -2.5489 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:15 Heat of formation + Delta-G solvation = -58.844614 kcal Electronic energy + Delta-G solvation = -35127.988042 eV Core-core repulsion = 30144.930256 eV Total energy + Delta-G solvation = -4983.057787 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.159 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -50.06454 -50.04085 -42.02462 -41.41313 -40.24023 -38.78675 -37.70622 -37.28503 -34.82821 -32.91182 -32.11068 -31.49229 -31.19726 -28.82098 -27.13283 -26.98304 -26.93842 -25.89685 -24.08433 -23.61153 -23.14383 -22.89688 -21.37018 -20.59503 -19.26287 -18.93126 -18.19203 -18.04731 -17.88868 -17.55904 -17.46508 -17.04975 -16.91703 -16.64736 -16.49048 -16.34696 -16.19228 -16.08662 -15.80358 -15.67540 -15.44992 -15.35611 -15.08523 -14.87161 -14.64232 -14.24161 -14.13462 -13.85794 -13.79109 -13.72750 -13.65149 -13.25746 -13.22286 -13.16422 -12.99524 -12.90880 -12.86382 -12.77631 -12.30790 -12.03307 -11.90529 -11.53191 -11.32875 -11.14373 -10.88787 -10.30255 -10.20618 -10.01871 -9.91882 -9.88224 -9.80475 -4.74680 -0.49463 -0.19692 -0.16840 0.03550 1.46335 1.59126 1.76792 1.86352 2.09599 2.15115 2.53515 2.55406 2.70569 3.09356 3.22313 3.35923 3.40213 3.42903 3.48884 3.57644 3.63506 3.67450 3.77908 3.80917 3.86204 3.91511 3.94858 4.02312 4.07578 4.11412 4.27521 4.32355 4.36256 4.37411 4.48127 4.52160 4.53245 4.57896 4.60838 4.67657 4.68832 4.71021 4.73156 4.78134 4.83850 4.87557 4.89006 4.90799 5.01326 5.11183 5.16106 5.36537 5.42682 5.53786 5.62317 6.04140 6.27901 6.66956 7.04025 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.516 5.516 3 C 0.026 3.974 4 C 0.128 3.872 5 C -0.096 4.096 6 C -0.066 4.066 7 O -0.533 6.533 8 Si 0.734 3.266 9 C -0.054 4.054 10 C -0.134 4.134 11 C 0.563 3.437 12 O -0.528 6.528 13 N -0.709 5.709 14 C 0.120 3.880 15 H 0.110 0.890 16 C -0.134 4.134 17 C -0.077 4.077 18 H 0.105 0.895 19 C -0.013 4.013 20 C -0.163 4.163 21 C 0.137 3.863 22 F -0.128 7.128 23 C -0.197 4.197 24 C 0.135 3.865 25 F -0.129 7.129 26 C -0.161 4.161 27 C -0.144 4.144 28 C -0.071 4.071 29 C -0.153 4.153 30 H 0.074 0.926 31 H 0.035 0.965 32 H 0.081 0.919 33 H 0.080 0.920 34 H 0.072 0.928 35 H 0.034 0.966 36 H 0.081 0.919 37 H 0.365 0.635 38 H -0.249 1.249 39 H -0.249 1.249 40 H 0.141 0.859 41 H 0.401 0.599 42 H 0.103 0.897 43 H 0.081 0.919 44 H 0.145 0.855 45 H 0.149 0.851 46 H 0.142 0.858 47 H 0.079 0.921 48 H 0.099 0.901 49 H 0.129 0.871 50 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.304 4.817 2.153 6.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.237 5.237 3 C -0.120 4.120 4 C 0.033 3.967 5 C -0.098 4.098 6 C -0.175 4.175 7 O -0.338 6.338 8 Si 0.633 3.367 9 C -0.073 4.073 10 C -0.137 4.137 11 C 0.351 3.649 12 O -0.404 6.404 13 N -0.361 5.361 14 C 0.014 3.986 15 H 0.128 0.872 16 C -0.172 4.172 17 C -0.095 4.095 18 H 0.123 0.877 19 C -0.013 4.013 20 C -0.182 4.182 21 C 0.117 3.883 22 F -0.107 7.107 23 C -0.217 4.217 24 C 0.116 3.884 25 F -0.108 7.108 26 C -0.180 4.180 27 C -0.182 4.182 28 C -0.091 4.091 29 C -0.173 4.173 30 H 0.093 0.907 31 H 0.054 0.946 32 H 0.099 0.901 33 H 0.099 0.901 34 H 0.091 0.909 35 H 0.053 0.947 36 H 0.099 0.901 37 H 0.213 0.787 38 H -0.173 1.173 39 H -0.173 1.173 40 H 0.158 0.842 41 H 0.236 0.764 42 H 0.121 0.879 43 H 0.100 0.900 44 H 0.163 0.837 45 H 0.167 0.833 46 H 0.160 0.840 47 H 0.098 0.902 48 H 0.117 0.883 49 H 0.147 0.853 50 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.658 2.976 2.239 4.077 hybrid contribution -1.657 2.190 -2.185 3.509 sum -3.315 5.166 0.054 6.138 Atomic orbital electron populations 1.22558 0.84935 1.03216 1.01686 1.59462 1.09054 1.14836 1.40331 1.22497 1.01120 0.86687 1.01703 1.18835 0.95311 0.93482 0.89066 1.20287 0.98078 0.94868 0.96544 1.25128 0.97495 1.05746 0.89150 1.86721 1.22193 1.42828 1.82062 0.93300 0.75275 0.79115 0.89014 1.21118 0.96995 0.98278 0.90922 1.19850 1.02300 0.98022 0.93503 1.18151 0.80126 0.83918 0.82732 1.90828 1.37064 1.27330 1.85218 1.45559 1.52874 1.32739 1.04960 1.21869 0.94601 0.97183 0.84929 0.87240 1.23438 0.99189 0.98104 0.96455 1.21738 0.98279 0.99461 0.90010 0.87731 1.19296 0.94545 0.92126 0.95331 1.21073 1.02365 1.01498 0.93261 1.17250 0.94252 0.85648 0.91105 1.91569 1.76484 1.58380 1.84249 1.21096 1.04057 0.94032 1.02483 1.17273 0.97320 0.84162 0.89645 1.91561 1.89488 1.52061 1.77650 1.21109 1.04149 1.00323 0.92449 1.23645 0.96518 1.00285 0.97757 1.21140 0.95175 0.93556 0.99206 1.21611 1.01741 1.01115 0.92786 0.90718 0.94616 0.90055 0.90112 0.90902 0.94695 0.90070 0.78698 1.17344 1.17312 0.84224 0.76351 0.87885 0.90021 0.83738 0.83285 0.83980 0.90225 0.88256 0.85302 0.85088 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.20 60.07 0.55 0.49 16 2 N -0.52 0.68 3.67 -186.85 -0.69 -0.01 16 3 C 0.03 -0.06 9.32 60.06 0.56 0.50 16 4 C 0.13 0.01 4.65 -83.86 -0.39 -0.38 16 5 C -0.10 -0.17 5.28 -104.49 -0.55 -0.73 16 6 C -0.07 -0.08 2.29 36.01 0.08 0.00 16 7 O -0.53 -1.00 12.65 -35.23 -0.45 -1.45 16 8 Si 0.73 0.90 30.40 -169.99 -5.17 -4.26 16 9 C -0.05 -0.17 8.19 -39.23 -0.32 -0.49 16 10 C -0.13 -0.22 5.88 -104.95 -0.62 -0.84 16 11 C 0.56 1.43 7.76 -12.48 -0.10 1.33 16 12 O -0.53 -3.46 15.95 5.28 0.08 -3.38 16 13 N -0.71 0.81 5.21 -54.06 -0.28 0.53 16 14 C 0.12 -0.17 4.29 -67.12 -0.29 -0.46 16 15 H 0.11 0.04 7.50 -51.92 -0.39 -0.35 16 16 C -0.13 0.45 7.29 -25.91 -0.19 0.26 16 17 C -0.08 0.25 3.87 -90.81 -0.35 -0.10 16 18 H 0.10 -0.47 8.09 -51.93 -0.42 -0.89 16 19 C -0.01 0.02 5.29 -104.64 -0.55 -0.53 16 20 C -0.16 0.16 8.61 -39.51 -0.34 -0.18 16 21 C 0.14 0.08 7.30 -39.43 -0.29 -0.21 16 22 F -0.13 -0.24 17.27 2.25 0.04 -0.20 16 23 C -0.20 -0.08 10.01 -39.45 -0.39 -0.48 16 24 C 0.14 0.07 7.30 -39.43 -0.29 -0.22 16 25 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 26 C -0.16 0.17 9.69 -39.50 -0.38 -0.21 16 27 C -0.14 0.30 7.27 -25.78 -0.19 0.12 16 28 C -0.07 0.08 9.53 -39.23 -0.37 -0.29 16 29 C -0.15 0.17 8.57 -39.44 -0.34 -0.17 16 30 H 0.07 -0.19 7.84 -51.93 -0.41 -0.60 16 31 H 0.04 -0.11 7.08 -51.93 -0.37 -0.47 16 32 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.08 -0.26 8.14 -51.92 -0.42 -0.68 16 34 H 0.07 -0.13 8.12 -51.93 -0.42 -0.55 16 35 H 0.03 -0.10 7.46 -51.93 -0.39 -0.48 16 36 H 0.08 0.02 7.77 -51.93 -0.40 -0.39 16 37 H 0.37 -0.04 8.06 45.56 0.37 0.33 16 38 H -0.25 -1.08 6.81 56.52 0.38 -0.70 16 39 H -0.25 -0.71 7.11 56.52 0.40 -0.30 16 40 H 0.14 0.65 4.50 -52.49 -0.24 0.41 16 41 H 0.40 -1.58 6.72 -40.82 -0.27 -1.85 16 42 H 0.10 -0.36 7.73 -51.93 -0.40 -0.76 16 43 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 44 H 0.14 -0.34 6.65 -52.48 -0.35 -0.69 16 45 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 46 H 0.14 -0.40 8.05 -52.49 -0.42 -0.82 16 47 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 48 H 0.10 -0.24 6.31 -51.93 -0.33 -0.57 16 49 H 0.13 -0.56 6.39 -52.48 -0.34 -0.89 16 50 H 0.13 -0.37 7.01 -52.48 -0.37 -0.74 16 LS Contribution 413.84 15.07 6.24 6.24 Total: 0.00 -7.38 413.84 -11.41 -18.79 By element: Atomic # 1 Polarization: -7.01 SS G_CDS: -6.47 Total: -13.48 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -4.76 Total: -2.60 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: -0.97 Total: 0.52 kcal Atomic # 8 Polarization: -4.46 SS G_CDS: -0.36 Total: -4.82 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.08 Total: -0.38 kcal Atomic # 14 Polarization: 0.90 SS G_CDS: -5.17 Total: -4.26 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -7.38 -11.41 -18.79 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.056 kcal (2) G-P(sol) polarization free energy of solvation -7.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.411 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.789 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds