Wall clock time and date at job start Tue Mar 9 2021 13:10:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.34169 * 125.43712 * 65.00513 * 4 2 1 6 6 C 1.47021 * 105.95566 * 179.97438 * 5 4 2 7 7 C 1.47373 * 127.19734 * 179.97438 * 6 5 4 8 8 O 1.21616 * 119.99676 * 0.02562 * 7 6 5 9 9 N 1.34781 * 120.00204 * 179.97438 * 7 6 5 10 10 C 1.46502 * 120.00067 * 180.02562 * 9 7 6 11 11 H 1.09004 * 112.84752 * 23.80325 * 10 9 7 12 12 C 1.53774 * 113.61385 * 154.99939 * 10 9 7 13 13 C 1.53786 * 87.08199 * 89.11734 * 12 10 9 14 14 H 1.08997 * 113.61457 * 270.88593 * 13 12 10 15 15 C 1.50694 * 113.61622 * 140.06046 * 13 12 10 16 16 C 1.38205 * 119.97900 * 299.73053 * 15 13 12 17 17 C 1.38480 * 120.02697 * 179.77036 * 16 15 13 18 18 F 1.35100 * 120.01288 * 180.23221 * 17 16 15 19 19 C 1.38416 * 119.97099 * 0.49765 * 17 16 15 20 20 C 1.38422 * 119.95045 * 359.75529 * 19 17 16 21 21 F 1.35106 * 120.00853 * 179.97438 * 20 19 17 22 22 C 1.38214 * 119.97368 * 120.00134 * 15 13 12 23 23 C 1.53779 * 113.61554 * 252.50162 * 10 9 7 24 24 C 1.36425 * 105.61339 * 359.97438 * 6 5 4 25 25 O 1.33652 * 108.39368 * 359.73905 * 24 6 5 26 26 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 27 27 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 28 28 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 29 29 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 30 30 H 1.08003 * 127.02844 * 359.95407 * 5 4 2 31 31 H 0.96996 * 119.99994 * 0.02562 * 9 7 6 32 32 H 1.09003 * 113.61667 * 203.66296 * 12 10 9 33 33 H 1.09001 * 113.61779 * 334.56946 * 12 10 9 34 34 H 1.08000 * 119.98514 * 359.97438 * 16 15 13 35 35 H 1.08002 * 120.02403 * 179.77016 * 19 17 16 36 36 H 1.08006 * 119.98586 * 359.96041 * 22 15 13 37 37 H 1.08998 * 113.61628 * 25.42710 * 23 10 9 38 38 H 1.09000 * 113.61498 * 156.33775 * 23 10 9 39 39 H 1.07996 * 125.79916 * 179.97438 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7549 -2.0121 1.5038 6 6 2.4127 -2.2462 2.7977 7 6 2.5003 -3.5191 3.5352 8 8 1.9928 -4.5242 3.0757 9 7 3.1437 -3.5695 4.7185 10 6 3.2312 -4.8350 5.4514 11 1 3.1278 -5.7065 4.8049 12 6 4.4364 -4.9135 6.4032 13 6 3.5283 -4.2925 7.4778 14 1 3.5444 -3.2027 7.4865 15 6 3.7173 -4.8915 8.8476 16 6 3.4875 -6.2393 9.0496 17 6 3.6654 -6.7918 10.3069 18 9 3.4452 -8.1102 10.5030 19 6 4.0636 -5.9916 11.3638 20 6 4.2884 -4.6408 11.1614 21 9 4.6767 -3.8585 12.1923 22 6 4.1149 -4.0916 9.9022 23 6 2.3392 -4.8849 6.7030 24 6 2.9251 -1.0388 3.1729 25 8 2.6324 -0.1434 2.2247 26 1 -0.3934 0.4418 0.7650 27 1 1.7924 -0.5139 -0.8899 28 1 1.5616 2.4678 -1.2086 29 1 1.5878 2.4586 1.2241 30 1 1.2356 -2.7394 0.8973 31 1 3.5487 -2.7679 5.0848 32 1 4.7476 -5.9331 6.6306 33 1 5.2672 -4.2718 6.1097 34 1 3.1721 -6.8625 8.2258 35 1 4.1991 -6.4208 12.3455 36 1 4.2906 -3.0377 9.7440 37 1 1.4770 -4.2201 6.6516 38 1 2.0771 -5.8967 7.0123 39 1 3.4769 -0.8411 4.0799 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:26 Heat of formation + Delta-G solvation = -81.263276 kcal Electronic energy + Delta-G solvation = -27213.723947 eV Core-core repulsion = 22726.814350 eV Total energy + Delta-G solvation = -4486.909597 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.101 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -50.05340 -50.03181 -43.78781 -41.70345 -40.16501 -38.65661 -38.19443 -34.80613 -33.87254 -32.27237 -31.62604 -31.36024 -27.17189 -26.96216 -26.55052 -25.00427 -23.97568 -23.02052 -22.35063 -21.19422 -20.56275 -19.44843 -18.97868 -18.17138 -17.91716 -17.61227 -17.55493 -17.43450 -17.08023 -17.03796 -16.72849 -16.33759 -16.26762 -16.13873 -15.85933 -15.56130 -15.34683 -15.32744 -14.63109 -14.21679 -14.18471 -13.98408 -13.82003 -13.72662 -13.64344 -13.19099 -13.00526 -13.00062 -12.87060 -12.29380 -12.12455 -11.88700 -11.52219 -11.14158 -10.95946 -10.80731 -10.24523 -10.00326 -9.88863 -9.87082 -5.04696 -0.18727 -0.15848 0.15476 0.83203 1.07212 1.42035 1.65920 1.86711 1.91440 2.15832 2.26182 2.71602 3.08360 3.11211 3.23302 3.30074 3.39756 3.43613 3.50291 3.63743 3.68927 3.79247 3.82930 3.87049 3.95814 4.21928 4.31675 4.39813 4.49706 4.52025 4.55299 4.60134 4.66901 4.69465 4.73632 4.79616 4.85375 4.88619 4.91436 5.14812 5.18411 5.41645 5.63310 5.76013 6.18125 6.32736 7.11585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.036 4.036 3 Si 0.704 3.296 4 C -0.056 4.056 5 C -0.122 4.122 6 C -0.238 4.238 7 C 0.591 3.409 8 O -0.527 6.527 9 N -0.712 5.712 10 C 0.122 3.878 11 H 0.110 0.890 12 C -0.134 4.134 13 C -0.077 4.077 14 H 0.105 0.895 15 C -0.013 4.013 16 C -0.163 4.163 17 C 0.137 3.863 18 F -0.129 7.129 19 C -0.197 4.197 20 C 0.135 3.865 21 F -0.129 7.129 22 C -0.161 4.161 23 C -0.144 4.144 24 C 0.033 3.967 25 O -0.165 6.165 26 H 0.381 0.619 27 H 0.138 0.862 28 H -0.249 1.249 29 H -0.256 1.256 30 H 0.163 0.837 31 H 0.399 0.601 32 H 0.102 0.898 33 H 0.082 0.918 34 H 0.145 0.855 35 H 0.149 0.851 36 H 0.143 0.857 37 H 0.079 0.921 38 H 0.099 0.901 39 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.831 3.906 0.383 5.484 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.145 4.145 3 Si 0.603 3.397 4 C -0.104 4.104 5 C -0.142 4.142 6 C -0.242 4.242 7 C 0.379 3.621 8 O -0.403 6.403 9 N -0.363 5.363 10 C 0.016 3.984 11 H 0.128 0.872 12 C -0.172 4.172 13 C -0.095 4.095 14 H 0.123 0.877 15 C -0.013 4.013 16 C -0.182 4.182 17 C 0.117 3.883 18 F -0.107 7.107 19 C -0.217 4.217 20 C 0.116 3.884 21 F -0.108 7.108 22 C -0.180 4.180 23 C -0.183 4.183 24 C -0.038 4.038 25 O -0.061 6.061 26 H 0.229 0.771 27 H 0.156 0.844 28 H -0.173 1.173 29 H -0.180 1.180 30 H 0.180 0.820 31 H 0.233 0.767 32 H 0.120 0.880 33 H 0.100 0.900 34 H 0.163 0.837 35 H 0.167 0.833 36 H 0.161 0.839 37 H 0.098 0.902 38 H 0.117 0.883 39 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 3.400 3.977 -0.485 5.255 hybrid contribution -0.793 -0.196 1.373 1.597 sum 2.607 3.781 0.888 4.678 Atomic orbital electron populations 1.86685 1.16619 1.80117 1.49226 1.24406 0.84050 1.12298 0.93739 0.94453 0.91260 0.72994 0.80967 1.22685 1.01567 0.93398 0.92762 1.22549 1.01010 0.95308 0.95294 1.21495 1.09315 0.94211 0.99223 1.17254 0.77687 0.87157 0.79971 1.90832 1.46061 1.35638 1.67782 1.45485 1.57700 1.11889 1.21265 1.21840 0.96231 0.87721 0.92599 0.87189 1.23452 0.96703 1.02985 0.94086 1.21694 0.98054 1.00299 0.89448 0.87693 1.19302 0.95106 0.92117 0.94784 1.21075 1.04779 0.95951 0.96403 1.17253 0.99232 0.78155 0.93638 1.91567 1.91963 1.31429 1.95742 1.21098 1.06680 0.92975 1.00941 1.17278 0.98426 0.87998 0.84715 1.91565 1.88127 1.73886 1.57195 1.21111 1.04284 1.01654 0.90971 1.23607 0.97048 1.02705 0.94923 1.24464 0.99460 0.86744 0.93136 1.83698 1.56960 1.39054 1.26427 0.77104 0.84423 1.17330 1.18004 0.81988 0.76688 0.87953 0.89984 0.83734 0.83310 0.83948 0.90239 0.88312 0.77012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.09 12.88 -35.23 -0.45 -0.54 16 2 C -0.04 0.05 2.97 36.01 0.11 0.15 16 3 Si 0.70 -1.37 32.09 -169.99 -5.46 -6.82 16 4 C -0.06 0.02 6.18 -35.74 -0.22 -0.20 16 5 C -0.12 -0.14 10.90 -37.46 -0.41 -0.55 16 6 C -0.24 -0.05 6.31 -103.28 -0.65 -0.70 16 7 C 0.59 0.84 7.81 -12.54 -0.10 0.75 16 8 O -0.53 -3.09 16.58 5.26 0.09 -3.00 16 9 N -0.71 1.66 5.25 -54.11 -0.28 1.38 16 10 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 11 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 12 C -0.13 0.54 7.29 -25.92 -0.19 0.35 16 13 C -0.08 0.30 3.85 -90.96 -0.35 -0.05 16 14 H 0.10 -0.55 8.09 -51.93 -0.42 -0.97 16 15 C -0.01 0.03 5.29 -104.65 -0.55 -0.53 16 16 C -0.16 0.21 8.60 -39.50 -0.34 -0.12 16 17 C 0.14 0.04 7.30 -39.43 -0.29 -0.25 16 18 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 19 C -0.20 -0.04 10.01 -39.45 -0.39 -0.43 16 20 C 0.14 0.03 7.30 -39.43 -0.29 -0.26 16 21 F -0.13 -0.19 17.27 2.25 0.04 -0.15 16 22 C -0.16 0.24 9.69 -39.51 -0.38 -0.14 16 23 C -0.14 0.40 7.25 -25.92 -0.19 0.21 16 24 C 0.03 -0.09 11.61 30.08 0.35 0.26 16 25 O -0.17 0.20 8.90 7.65 0.07 0.27 16 26 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 27 H 0.14 -0.35 7.96 -51.93 -0.41 -0.77 16 28 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 29 H -0.26 -0.14 7.11 56.52 0.40 0.27 16 30 H 0.16 0.28 8.06 -52.48 -0.42 -0.14 16 31 H 0.40 -2.22 7.67 -40.82 -0.31 -2.53 16 32 H 0.10 -0.41 7.73 -51.93 -0.40 -0.81 16 33 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 34 H 0.14 -0.39 6.64 -52.49 -0.35 -0.74 16 35 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 36 H 0.14 -0.46 8.05 -52.48 -0.42 -0.89 16 37 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.10 -0.29 6.30 -51.93 -0.33 -0.61 16 39 H 0.21 -1.58 7.47 -52.49 -0.39 -1.98 16 LS Contribution 349.64 15.07 5.27 5.27 Total: 0.00 -9.02 349.64 -8.80 -17.82 By element: Atomic # 1 Polarization: -8.05 SS G_CDS: -3.92 Total: -11.97 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -4.19 Total: -2.08 kcal Atomic # 7 Polarization: 1.66 SS G_CDS: -0.28 Total: 1.38 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.30 Total: -3.28 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.08 Total: -0.32 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.46 Total: -6.82 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -9.02 -8.80 -17.82 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.443 kcal (2) G-P(sol) polarization free energy of solvation -9.024 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.797 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.820 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.263 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds