Wall clock time and date at job start Tue Mar 9 2021 13:10:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46876 * 2 1 4 4 C 1.50704 * 109.47179 * 239.99927 * 2 1 3 5 5 C 1.31113 * 118.54493 * 119.97784 * 4 2 1 6 6 N 1.38959 * 121.86844 * 179.68842 * 5 4 2 7 7 C 1.47028 * 118.86034 * 13.17828 * 6 5 4 8 8 C 1.50703 * 109.82131 * 196.88003 * 7 6 5 9 9 O 1.21280 * 120.00237 * 19.13460 * 8 7 6 10 10 N 1.34779 * 119.99720 * 199.13511 * 8 7 6 11 11 C 1.46502 * 119.99823 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.84928 * 23.80735 * 11 10 8 13 13 C 1.53780 * 113.61280 * 154.99805 * 11 10 8 14 14 C 1.53787 * 87.08092 * 89.20194 * 13 11 10 15 15 H 1.08998 * 113.61344 * 270.80393 * 14 13 11 16 16 C 1.50694 * 113.61648 * 139.97887 * 14 13 11 17 17 C 1.38206 * 119.97465 * 119.99885 * 16 14 13 18 18 C 1.38475 * 120.02649 * 179.97438 * 17 16 14 19 19 F 1.35101 * 120.01373 * 179.72764 * 18 17 16 20 20 C 1.38418 * 119.97347 * 359.97438 * 18 17 16 21 21 C 1.38422 * 119.95048 * 0.02562 * 20 18 17 22 22 F 1.35098 * 120.01073 * 180.02562 * 21 20 18 23 23 C 1.38207 * 119.97590 * 299.98201 * 16 14 13 24 24 C 1.53779 * 113.68909 * 252.53474 * 11 10 8 25 25 C 1.53545 * 107.71073 * 316.44801 * 7 6 5 26 26 C 1.50207 * 118.54658 * 300.00189 * 4 2 1 27 27 H 0.96700 * 114.00071 * 60.00304 * 1 2 3 28 28 H 1.08997 * 109.47302 * 120.00159 * 2 1 3 29 29 H 1.48498 * 110.00022 * 60.00315 * 3 2 1 30 30 H 1.48504 * 109.99557 * 181.31842 * 3 2 1 31 31 H 1.08006 * 119.07822 * 359.63806 * 5 4 2 32 32 H 0.97011 * 120.58565 * 193.28341 * 6 5 4 33 33 H 1.08999 * 109.82121 * 76.01770 * 7 6 5 34 34 H 0.96998 * 120.00353 * 0.02562 * 10 8 7 35 35 H 1.09002 * 113.61635 * 334.65517 * 13 11 10 36 36 H 1.09002 * 113.69052 * 203.75502 * 13 11 10 37 37 H 1.07998 * 119.99065 * 359.96304 * 17 16 14 38 38 H 1.08000 * 120.02476 * 179.97438 * 20 18 17 39 39 H 1.07998 * 119.98994 * 359.97438 * 23 16 14 40 40 H 1.09006 * 113.60973 * 156.32919 * 24 11 10 41 41 H 1.08996 * 113.61548 * 25.42529 * 24 11 10 42 42 H 1.08996 * 109.61880 * 180.64054 * 25 7 6 43 43 H 1.09004 * 109.61750 * 301.19806 * 25 7 6 44 44 H 1.08996 * 109.33182 * 79.76847 * 26 4 2 45 45 H 1.08999 * 109.18568 * 320.19989 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.6828 -0.0459 -2.0747 6 7 3.1884 -0.6345 -3.2275 7 6 2.6445 -1.9303 -3.6598 8 6 3.5808 -2.5725 -4.6508 9 8 4.7362 -2.2096 -4.7166 10 7 3.1341 -3.5500 -5.4641 11 6 4.0442 -4.1739 -6.4279 12 1 5.0914 -4.0880 -6.1381 13 6 3.6316 -5.5995 -6.8309 14 6 2.8005 -4.9569 -7.9541 15 1 1.7823 -4.7075 -7.6558 16 6 2.8604 -5.7119 -9.2569 17 6 1.7016 -6.2152 -9.8172 18 6 1.7553 -6.9087 -11.0146 19 9 0.6231 -7.4053 -11.5592 20 6 2.9701 -7.0972 -11.6507 21 6 4.1301 -6.5926 -11.0886 22 9 5.3164 -6.7754 -11.7087 23 6 4.0740 -5.9001 -9.8908 24 6 3.7731 -3.7676 -7.8860 25 6 2.5131 -2.8203 -2.4156 26 6 1.5486 -2.1484 -1.4357 27 1 -0.3933 0.4417 -0.7651 28 1 1.7924 -0.5138 0.8899 29 1 1.5615 2.4679 1.2085 30 1 3.5346 1.7703 -0.0321 31 1 2.9148 0.9887 -1.8690 32 1 3.8893 -0.1990 -3.7375 33 1 1.6653 -1.7863 -4.1163 34 1 2.2100 -3.8400 -5.4118 35 1 3.0292 -6.1089 -6.0788 36 1 4.4592 -6.2088 -7.1942 37 1 0.7538 -6.0679 -9.3209 38 1 3.0130 -7.6382 -12.5844 39 1 4.9789 -5.5058 -9.4525 40 1 4.6403 -3.8750 -8.5376 41 1 3.2850 -2.7981 -7.9856 42 1 2.1219 -3.7961 -2.7032 43 1 3.4894 -2.9384 -1.9453 44 1 0.5356 -2.1987 -1.8348 45 1 1.5856 -2.6689 -0.4787 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:35 Heat of formation + Delta-G solvation = -79.935060 kcal Electronic energy + Delta-G solvation = -29910.847437 eV Core-core repulsion = 25338.865000 eV Total energy + Delta-G solvation = -4571.982437 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.143 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -50.08342 -50.05621 -41.77685 -40.80584 -39.54589 -38.57103 -37.28261 -34.72789 -33.14745 -32.96624 -31.83307 -31.32631 -27.78274 -26.69744 -26.32534 -25.29855 -24.02372 -23.73782 -22.95429 -21.91206 -20.42552 -19.38168 -19.02825 -18.87701 -18.11740 -17.96174 -17.42844 -17.22516 -17.05197 -16.78009 -16.65895 -16.37812 -16.29529 -16.07831 -15.96197 -15.46428 -15.33315 -15.24412 -15.16995 -14.80540 -14.36310 -14.18557 -14.05481 -13.89800 -13.69743 -13.46950 -13.08280 -12.98445 -12.93102 -12.89280 -12.76516 -12.20514 -12.08323 -11.93017 -11.83328 -11.68613 -11.30482 -11.22121 -10.88667 -10.15265 -10.12298 -9.90048 -9.81326 -8.42555 -4.99824 -0.10402 -0.08552 1.33453 1.42542 1.48957 1.63132 1.89545 2.00915 2.25483 2.66135 2.77813 3.26694 3.38926 3.54048 3.57724 3.67874 3.70263 3.77561 3.84121 3.90285 3.91100 3.93205 4.07029 4.07833 4.13646 4.35249 4.48867 4.60401 4.65129 4.66671 4.73214 4.75001 4.78387 4.78482 4.81181 4.87612 4.97529 4.98026 5.04387 5.05487 5.14323 5.26321 5.31126 5.33985 5.58607 5.60866 5.71793 6.27479 6.48746 6.83227 6.97613 7.14210 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.045 4.045 3 Si 0.758 3.242 4 C -0.287 4.287 5 C 0.141 3.859 6 N -0.738 5.738 7 C 0.140 3.860 8 C 0.515 3.485 9 O -0.574 6.574 10 N -0.692 5.692 11 C 0.115 3.885 12 H 0.084 0.916 13 C -0.126 4.126 14 C -0.066 4.066 15 H 0.129 0.871 16 C -0.009 4.009 17 C -0.153 4.153 18 C 0.117 3.883 19 F -0.140 7.140 20 C -0.206 4.206 21 C 0.117 3.883 22 F -0.142 7.142 23 C -0.160 4.160 24 C -0.143 4.143 25 C -0.123 4.123 26 C -0.050 4.050 27 H 0.392 0.608 28 H 0.089 0.911 29 H -0.308 1.308 30 H -0.295 1.295 31 H 0.141 0.859 32 H 0.407 0.593 33 H 0.120 0.880 34 H 0.420 0.580 35 H 0.095 0.905 36 H 0.100 0.900 37 H 0.165 0.835 38 H 0.149 0.851 39 H 0.156 0.844 40 H 0.096 0.904 41 H 0.076 0.924 42 H 0.103 0.897 43 H 0.050 0.950 44 H 0.082 0.918 45 H 0.061 0.939 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.524 -0.205 -1.813 4.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.157 4.157 3 Si 0.667 3.333 4 C -0.298 4.298 5 C 0.020 3.980 6 N -0.371 5.371 7 C 0.031 3.969 8 C 0.302 3.698 9 O -0.453 6.453 10 N -0.344 5.344 11 C 0.009 3.991 12 H 0.103 0.897 13 C -0.164 4.164 14 C -0.084 4.084 15 H 0.147 0.853 16 C -0.009 4.009 17 C -0.172 4.172 18 C 0.098 3.902 19 F -0.119 7.119 20 C -0.226 4.226 21 C 0.097 3.903 22 F -0.120 7.120 23 C -0.179 4.179 24 C -0.181 4.181 25 C -0.162 4.162 26 C -0.087 4.087 27 H 0.242 0.758 28 H 0.107 0.893 29 H -0.237 1.237 30 H -0.223 1.223 31 H 0.158 0.842 32 H 0.243 0.757 33 H 0.137 0.863 34 H 0.258 0.742 35 H 0.114 0.886 36 H 0.118 0.882 37 H 0.182 0.818 38 H 0.167 0.833 39 H 0.174 0.826 40 H 0.114 0.886 41 H 0.094 0.906 42 H 0.121 0.879 43 H 0.069 0.931 44 H 0.101 0.899 45 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -3.214 0.179 -0.992 3.368 hybrid contribution 0.429 -0.714 -0.338 0.898 sum -2.786 -0.534 -1.329 3.132 Atomic orbital electron populations 1.86429 1.18001 1.82068 1.50490 1.24718 0.84811 1.08609 0.97525 0.94242 0.77353 0.76734 0.84941 1.20993 1.11579 0.97866 0.99343 1.20470 0.94993 0.96021 0.86504 1.44404 1.43894 1.21102 1.27684 1.21123 0.96574 0.85125 0.94037 1.20896 0.88208 0.79791 0.80928 1.90734 1.20347 1.63554 1.70659 1.45474 1.15118 1.37343 1.36489 1.21824 0.94639 0.94132 0.88486 0.89736 1.23405 1.00591 0.94979 0.97375 1.21738 1.01363 0.95009 0.90270 0.85309 1.19485 0.90649 0.94961 0.95856 1.21381 1.01308 0.99889 0.94624 1.17476 0.81436 0.97505 0.93802 1.91534 1.49119 1.85592 1.85620 1.21184 0.91098 1.06405 1.03906 1.17447 0.80372 0.99501 0.92953 1.91529 1.44581 1.93552 1.82349 1.21276 1.00726 1.01396 0.94463 1.23575 0.99923 0.98466 0.96142 1.21852 1.00455 0.99092 0.94759 1.19914 0.98792 0.91370 0.98641 0.75797 0.89346 1.23673 1.22308 0.84191 0.75695 0.86273 0.74169 0.88604 0.88165 0.81761 0.83284 0.82625 0.88595 0.90566 0.87906 0.93093 0.89946 0.92013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.06 12.78 -148.98 -1.90 -1.97 16 2 C -0.04 0.00 2.83 71.24 0.20 0.20 16 3 Si 0.76 -0.74 29.68 68.60 2.04 1.29 16 4 C -0.29 0.41 5.45 -16.75 -0.09 0.32 16 5 C 0.14 -0.30 9.63 83.41 0.80 0.50 16 6 N -0.74 1.38 5.47 -328.96 -1.80 -0.42 16 7 C 0.14 -0.73 3.36 44.33 0.15 -0.58 16 8 C 0.52 -1.04 7.09 87.66 0.62 -0.42 16 9 O -0.57 -4.33 15.68 -3.03 -0.05 -4.38 16 10 N -0.69 5.91 5.27 -440.03 -2.32 3.59 16 11 C 0.11 -0.79 4.32 45.52 0.20 -0.60 16 12 H 0.08 -0.12 7.46 -2.39 -0.02 -0.14 16 13 C -0.13 1.33 7.29 31.12 0.23 1.56 16 14 C -0.07 0.71 3.86 -11.01 -0.04 0.67 16 15 H 0.13 -1.90 8.09 -2.39 -0.02 -1.92 16 16 C -0.01 0.06 5.29 -19.88 -0.11 -0.05 16 17 C -0.15 0.72 9.69 22.32 0.22 0.94 16 18 C 0.12 0.01 7.30 22.37 0.16 0.17 16 19 F -0.14 -0.41 17.27 44.97 0.78 0.37 16 20 C -0.21 -0.17 10.01 22.36 0.22 0.05 16 21 C 0.12 0.09 7.30 22.37 0.16 0.26 16 22 F -0.14 -0.57 17.27 44.97 0.78 0.21 16 23 C -0.16 0.56 8.59 22.32 0.19 0.76 16 24 C -0.14 1.14 7.25 31.12 0.23 1.36 16 25 C -0.12 0.57 5.47 30.79 0.17 0.74 16 26 C -0.05 0.15 5.75 29.71 0.17 0.32 16 27 H 0.39 -3.30 8.70 -74.06 -0.64 -3.94 16 28 H 0.09 0.24 7.96 -2.39 -0.02 0.22 16 29 H -0.31 -2.28 7.11 99.48 0.71 -1.57 16 30 H -0.30 -1.33 7.10 99.48 0.71 -0.62 16 31 H 0.14 -0.67 4.37 -2.91 -0.01 -0.68 16 32 H 0.41 -0.26 8.10 -92.70 -0.75 -1.01 16 33 H 0.12 -1.24 8.14 -2.39 -0.02 -1.26 16 34 H 0.42 -6.35 8.70 -92.71 -0.81 -7.15 16 35 H 0.10 -1.21 8.14 -2.39 -0.02 -1.23 16 36 H 0.10 -0.97 7.72 -2.39 -0.02 -0.99 16 37 H 0.16 -1.54 8.05 -2.91 -0.02 -1.56 16 38 H 0.15 -0.05 8.06 -2.91 -0.02 -0.08 16 39 H 0.16 -0.99 6.65 -2.91 -0.02 -1.01 16 40 H 0.10 -0.71 6.31 -2.38 -0.02 -0.72 16 41 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 42 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 43 H 0.05 0.04 8.14 -2.38 -0.02 0.03 16 44 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 45 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 Total: 0.00 -20.73 375.26 -0.09 -20.82 By element: Atomic # 1 Polarization: -24.59 SS G_CDS: -1.09 Total: -25.69 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: 3.48 Total: 6.18 kcal Atomic # 7 Polarization: 7.28 SS G_CDS: -4.12 Total: 3.17 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -1.95 Total: -6.35 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 1.55 Total: 0.57 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: 2.04 Total: 1.29 kcal Total: -20.73 -0.09 -20.82 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.117 kcal (2) G-P(sol) polarization free energy of solvation -20.728 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.090 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.818 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.935 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds