Wall clock time and date at job start Tue Mar 9 2021 13:10:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86301 * 109.47510 * 2 1 4 4 C 1.50705 * 109.47235 * 120.00150 * 2 1 3 5 5 C 1.38709 * 120.02708 * 74.97477 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00128 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47031 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00089 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99605 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99557 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.85470 * 25.33033 * 11 10 8 13 13 C 1.53784 * 113.61539 * 156.53125 * 11 10 8 14 14 C 1.53772 * 87.08417 * 89.11085 * 13 11 10 15 15 H 1.09003 * 113.61844 * 270.80295 * 14 13 11 16 16 C 1.50706 * 113.61582 * 139.98434 * 14 13 11 17 17 C 1.38210 * 119.97053 * 299.72412 * 16 14 13 18 18 C 1.38470 * 120.02297 * 179.76420 * 17 16 14 19 19 F 1.35100 * 120.01298 * 180.25078 * 18 17 16 20 20 C 1.38421 * 119.97696 * 0.53381 * 18 17 16 21 21 C 1.38424 * 119.94688 * 359.72269 * 20 18 17 22 22 F 1.35100 * 120.01560 * 180.02562 * 21 20 18 23 23 C 1.38207 * 119.97796 * 119.99885 * 16 14 13 24 24 C 1.53782 * 113.61273 * 254.13343 * 11 10 8 25 25 C 1.38759 * 119.88803 * 180.02562 * 5 4 2 26 26 C 1.38126 * 119.94113 * 359.97438 * 25 5 4 27 27 C 1.38290 * 120.05768 * 359.97438 * 26 25 5 28 28 C 1.38164 * 120.02603 * 255.00183 * 4 2 1 29 29 H 0.96700 * 113.99964 * 60.00013 * 1 2 3 30 30 H 1.08999 * 109.47649 * 239.99596 * 2 1 3 31 31 H 1.48497 * 109.99657 * 298.68086 * 3 2 1 32 32 H 1.48503 * 109.99677 * 59.99713 * 3 2 1 33 33 H 1.09000 * 109.46735 * 300.00020 * 7 6 5 34 34 H 1.09002 * 109.46782 * 59.99820 * 7 6 5 35 35 H 0.97002 * 120.00324 * 359.97438 * 10 8 7 36 36 H 1.08996 * 113.61757 * 203.66443 * 13 11 10 37 37 H 1.09001 * 113.61061 * 334.56036 * 13 11 10 38 38 H 1.08002 * 119.98758 * 359.97438 * 17 16 14 39 39 H 1.07996 * 120.03156 * 179.74415 * 20 18 17 40 40 H 1.07998 * 119.98557 * 359.97438 * 23 16 14 41 41 H 1.09001 * 113.61750 * 25.43087 * 24 11 10 42 42 H 1.08998 * 113.61950 * 156.33766 * 24 11 10 43 43 H 1.07998 * 120.02758 * 179.97438 * 25 5 4 44 44 H 1.07995 * 119.97120 * 179.97438 * 26 25 5 45 45 H 1.07995 * 119.94278 * 180.27458 * 27 26 25 46 46 H 1.08005 * 119.97654 * 359.95318 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8692 -2.0940 1.3071 6 8 1.3558 -2.8107 0.2729 7 6 1.3227 -4.2316 0.4214 8 6 0.7249 -4.8521 -0.8150 9 8 0.3624 -4.1469 -1.7328 10 7 0.5921 -6.1905 -0.9004 11 6 0.0114 -6.7937 -2.1026 12 1 0.1307 -6.1705 -2.9888 13 6 0.4271 -8.2584 -2.3191 14 6 -0.7936 -8.6484 -1.4691 15 1 -0.5814 -8.7080 -0.4016 16 6 -1.5292 -9.8571 -1.9878 17 6 -2.0807 -9.8385 -3.2550 18 6 -2.7526 -10.9503 -3.7345 19 9 -3.2873 -10.9337 -4.9751 20 6 -2.8814 -12.0765 -2.9401 21 6 -2.3332 -12.0920 -1.6692 22 9 -2.4576 -13.1907 -0.8929 23 6 -1.6567 -10.9812 -1.1939 24 6 -1.4230 -7.3103 -1.9012 25 6 2.3321 -2.7452 2.4416 26 6 2.8539 -2.0145 3.4913 27 6 2.9157 -0.6353 3.4119 28 6 2.4536 0.0159 2.2834 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5139 -0.8899 31 1 1.5880 2.4585 -1.2242 32 1 1.5615 2.4678 1.2085 33 1 2.3367 -4.6059 0.5623 34 1 0.7154 -4.4922 1.2883 35 1 0.8816 -6.7545 -0.1662 36 1 0.3579 -8.5830 -3.3573 37 1 1.3806 -8.5145 -1.8572 38 1 -1.9847 -8.9578 -3.8726 39 1 -3.4088 -12.9426 -3.3117 40 1 -1.2288 -10.9931 -0.2024 41 1 -1.9622 -6.8016 -1.1021 42 1 -1.9972 -7.3762 -2.8254 43 1 2.2844 -3.8223 2.5039 44 1 3.2139 -2.5208 4.3747 45 1 3.3281 -0.0661 4.2319 46 1 2.5026 1.0932 2.2240 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:46 Heat of formation + Delta-G solvation = -99.716389 kcal Electronic energy + Delta-G solvation = -32511.484434 eV Core-core repulsion = 27584.473272 eV Total energy + Delta-G solvation = -4927.011163 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -50.09685 -50.07054 -41.79072 -41.28909 -40.25315 -38.84768 -38.23692 -37.61413 -34.70474 -32.88118 -32.11406 -31.39507 -31.16122 -29.37336 -26.73103 -26.65711 -26.42097 -24.06184 -23.71100 -22.93393 -22.47588 -21.80872 -20.43888 -19.33331 -18.97082 -18.59491 -18.26352 -18.11724 -17.45429 -17.40705 -17.30356 -17.06404 -16.88708 -16.80537 -16.62159 -16.39165 -15.94586 -15.64345 -15.53247 -15.44301 -15.32737 -15.16908 -14.88278 -14.59856 -14.09326 -13.93765 -13.81104 -13.73187 -13.60353 -13.46813 -13.11438 -13.06407 -12.94243 -12.79108 -12.63143 -12.10992 -12.10174 -11.81889 -11.76971 -11.72478 -11.33158 -11.01918 -10.43919 -10.18444 -9.95228 -9.92027 -9.82959 -9.19732 -4.96933 -0.12104 -0.10145 0.24605 0.43846 1.27864 1.42117 1.47615 1.56564 1.88902 2.23688 2.59011 2.68197 2.76192 3.24519 3.36693 3.44805 3.52434 3.55008 3.64950 3.75683 3.79100 3.88377 3.90007 3.94954 3.98841 4.05439 4.09657 4.11461 4.17844 4.26760 4.35912 4.53761 4.57767 4.67821 4.70870 4.73393 4.76025 4.77001 4.84302 4.95816 4.96151 4.98786 5.02345 5.11067 5.29544 5.30324 5.40704 5.54522 5.55616 5.70104 5.77370 6.28274 6.46301 6.56480 7.12540 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.084 4.084 3 Si 0.778 3.222 4 C -0.130 4.130 5 C 0.129 3.871 6 O -0.312 6.312 7 C 0.035 3.965 8 C 0.516 3.484 9 O -0.569 6.569 10 N -0.691 5.691 11 C 0.115 3.885 12 H 0.083 0.917 13 C -0.121 4.121 14 C -0.065 4.065 15 H 0.130 0.870 16 C -0.010 4.010 17 C -0.161 4.161 18 C 0.117 3.883 19 F -0.141 7.141 20 C -0.206 4.206 21 C 0.118 3.882 22 F -0.140 7.140 23 C -0.153 4.153 24 C -0.146 4.146 25 C -0.211 4.211 26 C -0.074 4.074 27 C -0.156 4.156 28 C -0.090 4.090 29 H 0.388 0.612 30 H 0.067 0.933 31 H -0.291 1.291 32 H -0.284 1.284 33 H 0.128 0.872 34 H 0.119 0.881 35 H 0.422 0.578 36 H 0.102 0.898 37 H 0.099 0.901 38 H 0.155 0.845 39 H 0.150 0.850 40 H 0.165 0.835 41 H 0.072 0.928 42 H 0.096 0.904 43 H 0.159 0.841 44 H 0.157 0.843 45 H 0.150 0.850 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.608 -2.750 5.231 8.865 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.192 4.192 3 Si 0.682 3.318 4 C -0.131 4.131 5 C 0.084 3.916 6 O -0.225 6.225 7 C -0.043 4.043 8 C 0.303 3.697 9 O -0.447 6.447 10 N -0.345 5.345 11 C 0.010 3.990 12 H 0.102 0.898 13 C -0.159 4.159 14 C -0.083 4.083 15 H 0.148 0.852 16 C -0.010 4.010 17 C -0.179 4.179 18 C 0.098 3.902 19 F -0.120 7.120 20 C -0.225 4.225 21 C 0.098 3.902 22 F -0.118 7.118 23 C -0.172 4.172 24 C -0.185 4.185 25 C -0.229 4.229 26 C -0.092 4.092 27 C -0.174 4.174 28 C -0.108 4.108 29 H 0.237 0.763 30 H 0.085 0.915 31 H -0.218 1.218 32 H -0.211 1.211 33 H 0.145 0.855 34 H 0.137 0.863 35 H 0.261 0.739 36 H 0.120 0.880 37 H 0.118 0.882 38 H 0.173 0.827 39 H 0.168 0.832 40 H 0.183 0.817 41 H 0.090 0.910 42 H 0.114 0.886 43 H 0.177 0.823 44 H 0.174 0.826 45 H 0.168 0.832 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 6.133 -1.727 4.913 8.045 hybrid contribution -1.710 -0.919 -0.681 2.058 sum 4.422 -2.646 4.231 6.668 Atomic orbital electron populations 1.86549 1.18993 1.80775 1.50232 1.25013 0.83813 1.12241 0.98113 0.94132 0.89901 0.71239 0.76518 1.18856 1.05707 0.91069 0.97476 1.19031 0.94102 0.90938 0.87555 1.86154 1.78065 1.18801 1.39519 1.22735 1.04696 0.79835 0.97022 1.20496 0.78089 0.82999 0.88157 1.90765 1.50182 1.62503 1.41256 1.45316 1.63242 1.05414 1.20565 1.21842 0.94194 0.94764 0.88242 0.89846 1.23384 0.98517 0.92115 1.01898 1.21784 0.95450 0.89449 1.01611 0.85227 1.19475 0.94868 0.94839 0.91810 1.21280 1.00399 0.98371 0.97868 1.17443 0.97207 0.95172 0.80425 1.91530 1.84170 1.96924 1.39373 1.21186 1.06238 1.00490 0.94608 1.17467 0.99545 0.84316 0.88855 1.91534 1.94198 1.52021 1.74072 1.21373 1.01313 0.91616 1.02858 1.23649 0.96543 0.95299 1.02972 1.21610 1.05468 1.01960 0.93847 1.21415 0.95460 0.94000 0.98335 1.21394 1.02178 0.95322 0.98463 1.21146 0.96913 1.00269 0.92449 0.76298 0.91517 1.21825 1.21091 0.85477 0.86292 0.73924 0.87962 0.88232 0.82695 0.83217 0.81723 0.90967 0.88570 0.82313 0.82554 0.83183 0.84238 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -5.75 12.86 -148.98 -1.92 -7.67 16 2 C -0.08 -0.57 2.37 71.24 0.17 -0.40 16 3 Si 0.78 1.40 30.20 68.60 2.07 3.47 16 4 C -0.13 -0.85 5.30 -19.77 -0.10 -0.95 16 5 C 0.13 0.68 6.66 22.51 0.15 0.83 16 6 O -0.31 -2.25 9.00 -73.33 -0.66 -2.91 16 7 C 0.03 -0.11 5.22 71.24 0.37 0.26 16 8 C 0.52 0.86 7.91 87.66 0.69 1.55 16 9 O -0.57 -7.78 16.12 16.01 0.26 -7.53 16 10 N -0.69 4.63 5.26 -440.04 -2.32 2.32 16 11 C 0.12 -0.58 4.29 45.52 0.20 -0.39 16 12 H 0.08 0.06 7.50 -2.39 -0.02 0.04 16 13 C -0.12 1.20 7.29 31.12 0.23 1.43 16 14 C -0.06 0.63 3.87 -10.92 -0.04 0.59 16 15 H 0.13 -1.81 8.09 -2.39 -0.02 -1.83 16 16 C -0.01 0.05 5.29 -19.88 -0.11 -0.05 16 17 C -0.16 0.42 8.60 22.32 0.19 0.62 16 18 C 0.12 0.17 7.30 22.37 0.16 0.34 16 19 F -0.14 -0.66 17.27 44.97 0.78 0.11 16 20 C -0.21 -0.28 10.01 22.36 0.22 -0.05 16 21 C 0.12 0.06 7.30 22.37 0.16 0.23 16 22 F -0.14 -0.46 17.27 44.97 0.78 0.32 16 23 C -0.15 0.64 9.69 22.32 0.22 0.85 16 24 C -0.15 0.85 7.27 31.21 0.23 1.08 16 25 C -0.21 0.32 9.04 22.37 0.20 0.52 16 26 C -0.07 0.22 10.04 22.26 0.22 0.44 16 27 C -0.16 0.17 10.04 22.28 0.22 0.39 16 28 C -0.09 -0.24 8.66 22.25 0.19 -0.05 16 29 H 0.39 1.18 8.74 -74.06 -0.65 0.54 16 30 H 0.07 0.50 7.83 -2.39 -0.02 0.48 16 31 H -0.29 -1.83 7.11 99.48 0.71 -1.13 16 32 H -0.28 -1.78 6.75 99.48 0.67 -1.11 16 33 H 0.13 -1.29 7.66 -2.39 -0.02 -1.31 16 34 H 0.12 -1.02 7.66 -2.39 -0.02 -1.04 16 35 H 0.42 -6.21 8.70 -92.71 -0.81 -7.01 16 36 H 0.10 -0.94 7.73 -2.39 -0.02 -0.96 16 37 H 0.10 -1.26 8.14 -2.39 -0.02 -1.28 16 38 H 0.16 -0.82 6.64 -2.91 -0.02 -0.84 16 39 H 0.15 0.01 8.06 -2.91 -0.02 -0.02 16 40 H 0.17 -1.47 8.05 -2.91 -0.02 -1.49 16 41 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.10 -0.51 6.30 -2.39 -0.02 -0.53 16 43 H 0.16 -1.38 6.30 -2.91 -0.02 -1.39 16 44 H 0.16 -1.38 8.06 -2.91 -0.02 -1.41 16 45 H 0.15 -0.89 8.06 -2.91 -0.02 -0.91 16 46 H 0.14 0.04 4.90 -2.91 -0.01 0.02 16 Total: 0.00 -28.31 394.54 2.19 -26.13 By element: Atomic # 1 Polarization: -21.08 SS G_CDS: -0.39 Total: -21.47 kcal Atomic # 6 Polarization: 3.64 SS G_CDS: 3.58 Total: 7.22 kcal Atomic # 7 Polarization: 4.63 SS G_CDS: -2.32 Total: 2.32 kcal Atomic # 8 Polarization: -15.79 SS G_CDS: -2.32 Total: -18.11 kcal Atomic # 9 Polarization: -1.12 SS G_CDS: 1.55 Total: 0.43 kcal Atomic # 14 Polarization: 1.40 SS G_CDS: 2.07 Total: 3.47 kcal Total: -28.31 2.19 -26.13 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.589 kcal (2) G-P(sol) polarization free energy of solvation -28.313 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.902 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.127 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.716 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds