Wall clock time and date at job start Tue Mar 9 2021 13:11:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86306 * 109.47035 * 2 1 4 4 C 1.50702 * 109.47354 * 240.00272 * 2 1 3 5 5 C 1.38246 * 119.94619 * 119.97708 * 4 2 1 6 6 C 1.38163 * 120.05518 * 179.76792 * 5 4 2 7 7 C 1.38713 * 119.94034 * 0.48479 * 6 5 4 8 8 O 1.35900 * 120.05168 * 179.79246 * 7 6 5 9 9 C 1.42900 * 117.00346 * 359.72238 * 8 7 6 10 10 C 1.50698 * 109.47675 * 180.02562 * 9 8 7 11 11 O 1.21282 * 119.99364 * 0.02562 * 10 9 8 12 12 N 1.34774 * 120.00600 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00099 * 180.02562 * 12 10 9 14 14 H 1.08994 * 112.91109 * 23.75176 * 13 12 10 15 15 C 1.53787 * 113.61210 * 155.00440 * 13 12 10 16 16 C 1.53778 * 87.08035 * 89.11438 * 15 13 12 17 17 H 1.09004 * 113.61682 * 270.87724 * 16 15 13 18 18 C 1.50699 * 113.61086 * 140.06661 * 16 15 13 19 19 C 1.38206 * 119.97793 * 299.72140 * 18 16 15 20 20 C 1.38472 * 120.03007 * 179.72771 * 19 18 16 21 21 F 1.35097 * 120.01297 * 180.25364 * 20 19 18 22 22 C 1.38416 * 119.97208 * 0.54911 * 20 19 18 23 23 C 1.38423 * 119.94946 * 359.72914 * 22 20 19 24 24 F 1.35101 * 120.01040 * 180.02562 * 23 22 20 25 25 C 1.38215 * 119.97817 * 119.99975 * 18 16 15 26 26 C 1.53778 * 87.08449 * 25.43264 * 16 15 13 27 27 C 1.38744 * 119.89130 * 359.51666 * 7 6 5 28 28 N 1.48003 * 120.02971 * 180.23262 * 27 7 6 29 29 O 1.21800 * 120.00414 * 180.02562 * 28 27 7 30 30 O 1.21804 * 119.99660 * 359.97438 * 28 27 7 31 31 C 1.38127 * 119.94721 * 0.25386 * 27 7 6 32 32 H 0.96697 * 113.99705 * 59.99864 * 1 2 3 33 33 H 1.09001 * 109.46932 * 119.99936 * 2 1 3 34 34 H 1.48498 * 110.00212 * 298.68268 * 3 2 1 35 35 H 1.48506 * 109.99856 * 60.00161 * 3 2 1 36 36 H 1.08003 * 119.97132 * 0.02562 * 5 4 2 37 37 H 1.07994 * 120.02691 * 180.25677 * 6 5 4 38 38 H 1.09005 * 109.47188 * 60.00032 * 9 8 7 39 39 H 1.09008 * 109.47210 * 300.00296 * 9 8 7 40 40 H 0.97002 * 119.99411 * 0.02562 * 12 10 9 41 41 H 1.08998 * 113.61103 * 203.66698 * 15 13 12 42 42 H 1.08997 * 113.61087 * 334.48007 * 15 13 12 43 43 H 1.08003 * 119.98633 * 359.97438 * 19 18 16 44 44 H 1.08004 * 120.02601 * 179.74523 * 22 20 19 45 45 H 1.08004 * 119.98266 * 0.02562 * 25 18 16 46 46 H 1.08993 * 113.61229 * 220.02023 * 26 16 15 47 47 H 1.09000 * 113.61263 * 89.11673 * 26 16 15 48 48 H 1.07996 * 119.97441 * 180.02562 * 31 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7258 -0.0372 -2.1399 6 6 3.1916 -0.6877 -3.2664 7 6 2.8532 -2.0143 -3.4894 8 8 3.3066 -2.6550 -4.5988 9 6 4.1227 -1.8997 -5.4963 10 6 4.5277 -2.7684 -6.6592 11 8 4.1538 -3.9209 -6.7142 12 7 5.3044 -2.2645 -7.6386 13 6 5.6976 -3.1090 -8.7693 14 1 5.0120 -3.9395 -8.9371 15 6 6.0285 -2.3159 -10.0446 16 6 7.4751 -2.2413 -9.5284 17 1 7.6686 -1.3757 -8.8948 18 6 8.5112 -2.4191 -10.6082 19 6 8.5495 -3.5893 -11.3426 20 6 9.4974 -3.7516 -12.3388 21 9 9.5312 -4.8936 -13.0599 22 6 10.4142 -2.7458 -12.5914 23 6 10.3787 -1.5765 -11.8515 24 9 11.2726 -0.5938 -12.0974 25 6 9.4262 -1.4142 -10.8597 26 6 7.1771 -3.5276 -8.7402 27 6 2.0558 -2.6876 -2.5752 28 7 1.6972 -4.1046 -2.8075 29 8 0.9968 -4.6951 -2.0049 30 8 2.1017 -4.6800 -3.8020 31 6 1.5966 -2.0343 -1.4482 32 1 -0.3933 0.4417 -0.7650 33 1 1.7923 -0.5138 0.8900 34 1 1.5879 2.4587 -1.2242 35 1 1.5615 2.4679 1.2086 36 1 2.9859 0.9968 -1.9676 37 1 3.8155 -0.1626 -3.9744 38 1 5.0141 -1.5536 -4.9731 39 1 3.5605 -1.0409 -5.8633 40 1 5.6030 -1.3426 -7.5947 41 1 5.9210 -2.8971 -10.9604 42 1 5.5318 -1.3471 -10.0975 43 1 7.8371 -4.3760 -11.1420 44 1 11.1566 -2.8732 -13.3655 45 1 9.3985 -0.5021 -10.2819 46 1 7.6088 -3.5363 -7.7395 47 1 7.3837 -4.4401 -9.2995 48 1 0.9762 -2.5581 -0.7360 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:29 Heat of formation + Delta-G solvation = -97.848145 kcal Electronic energy + Delta-G solvation = -38644.259386 eV Core-core repulsion = 32886.312800 eV Total energy + Delta-G solvation = -5757.946585 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.126 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -50.07587 -50.05017 -43.05430 -41.98473 -41.56605 -40.49925 -39.60408 -38.66272 -37.65209 -37.15108 -34.82639 -33.54922 -32.47559 -32.17230 -31.47105 -30.03978 -27.62935 -27.01427 -26.93486 -26.49842 -24.34292 -23.99739 -23.18534 -22.84323 -22.11908 -20.67139 -20.49484 -19.48866 -19.25743 -19.10447 -18.52286 -18.37693 -18.34536 -18.18848 -17.72801 -17.56631 -17.39556 -17.07552 -17.05682 -16.76487 -16.57421 -16.38070 -16.35687 -16.09318 -15.86043 -15.61677 -15.53539 -15.36924 -15.04868 -14.88756 -14.36657 -14.16559 -14.01283 -13.87677 -13.82821 -13.73724 -13.34082 -13.23480 -13.03696 -12.91549 -12.61209 -12.57447 -12.33633 -12.22632 -12.04463 -11.93397 -11.88127 -11.76152 -11.57361 -11.07563 -11.00563 -10.92741 -10.35157 -10.03069 -9.95859 -9.89800 -5.24996 -1.16577 -0.42209 -0.21217 -0.18130 0.34877 0.49925 0.95977 1.01020 1.30123 1.30490 1.73056 1.89268 2.08469 2.13664 2.69326 2.93345 2.96902 3.06974 3.11468 3.18003 3.20100 3.30302 3.35899 3.38202 3.47843 3.51301 3.54453 3.61787 3.65598 3.66366 3.76802 3.82716 3.92977 4.10380 4.14047 4.30461 4.34259 4.39313 4.45732 4.50429 4.56320 4.59580 4.63883 4.67179 4.74368 4.80864 4.85984 4.86287 4.88772 5.11525 5.30277 5.40390 5.60993 5.66736 6.12811 6.13542 6.90743 6.93098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.073 4.073 3 Si 0.688 3.312 4 C -0.155 4.155 5 C -0.024 4.024 6 C -0.209 4.209 7 C 0.200 3.800 8 O -0.254 6.254 9 C 0.031 3.969 10 C 0.516 3.484 11 O -0.491 6.491 12 N -0.711 5.711 13 C 0.122 3.878 14 H 0.112 0.888 15 C -0.134 4.134 16 C -0.076 4.076 17 H 0.105 0.895 18 C -0.014 4.014 19 C -0.163 4.163 20 C 0.137 3.863 21 F -0.128 7.128 22 C -0.197 4.197 23 C 0.135 3.865 24 F -0.129 7.129 25 C -0.161 4.161 26 C -0.144 4.144 27 C -0.075 4.075 28 N 0.028 4.972 29 O -0.177 6.177 30 O -0.118 6.118 31 C 0.009 3.991 32 H 0.378 0.622 33 H 0.126 0.874 34 H -0.256 1.256 35 H -0.250 1.250 36 H 0.149 0.851 37 H 0.157 0.843 38 H 0.103 0.897 39 H 0.102 0.898 40 H 0.402 0.598 41 H 0.103 0.897 42 H 0.081 0.919 43 H 0.145 0.855 44 H 0.149 0.851 45 H 0.142 0.858 46 H 0.080 0.920 47 H 0.100 0.900 48 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.277 10.107 -0.057 10.975 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.182 4.182 3 Si 0.588 3.412 4 C -0.157 4.157 5 C -0.042 4.042 6 C -0.228 4.228 7 C 0.150 3.850 8 O -0.163 6.163 9 C -0.048 4.048 10 C 0.300 3.700 11 O -0.363 6.363 12 N -0.365 5.365 13 C 0.017 3.983 14 H 0.130 0.870 15 C -0.172 4.172 16 C -0.095 4.095 17 H 0.124 0.876 18 C -0.014 4.014 19 C -0.182 4.182 20 C 0.118 3.882 21 F -0.107 7.107 22 C -0.217 4.217 23 C 0.116 3.884 24 F -0.108 7.108 25 C -0.180 4.180 26 C -0.182 4.182 27 C -0.160 4.160 28 N 0.548 4.452 29 O -0.385 6.385 30 O -0.342 6.342 31 C -0.010 4.010 32 H 0.226 0.774 33 H 0.144 0.856 34 H -0.181 1.181 35 H -0.175 1.175 36 H 0.167 0.833 37 H 0.174 0.826 38 H 0.121 0.879 39 H 0.120 0.880 40 H 0.237 0.763 41 H 0.121 0.879 42 H 0.100 0.900 43 H 0.163 0.837 44 H 0.167 0.833 45 H 0.160 0.840 46 H 0.098 0.902 47 H 0.118 0.882 48 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 3.996 10.219 0.523 10.985 hybrid contribution -0.533 0.177 -0.894 1.056 sum 3.464 10.396 -0.371 10.964 Atomic orbital electron populations 1.86661 1.17211 1.79832 1.49411 1.25077 0.84357 1.11175 0.97584 0.95187 0.91237 0.73753 0.81070 1.20260 1.02252 0.93889 0.99294 1.21266 0.91754 0.99946 0.91232 1.21263 1.07094 0.92662 1.01830 1.18685 0.89934 0.90796 0.85572 1.86502 1.62850 1.37464 1.29457 1.22719 0.96452 0.94856 0.90736 1.19818 0.79000 0.88177 0.83009 1.90879 1.52152 1.17058 1.76197 1.45435 1.52773 1.15655 1.22685 1.21867 0.96609 0.94588 0.85264 0.87042 1.23450 0.94142 1.01831 0.97765 1.21696 0.92683 1.00052 0.95033 0.87647 1.19294 0.94781 0.91990 0.95319 1.21079 1.00490 0.99737 0.96902 1.17254 0.96215 0.82748 0.92023 1.91569 1.95769 1.47277 1.76051 1.21105 1.02802 0.93520 1.04240 1.17278 0.89266 0.85711 0.96167 1.91563 1.65763 1.60052 1.93395 1.21103 0.96107 1.01374 0.99442 1.23606 0.95819 0.97383 1.01423 1.20587 1.10571 0.84055 1.00744 1.43341 0.99198 1.02276 1.00353 1.94561 1.35221 1.66668 1.42081 1.94698 1.54711 1.67587 1.17166 1.20848 0.93457 0.93568 0.93086 0.77418 0.85600 1.18123 1.17481 0.83335 0.82589 0.87884 0.88002 0.76303 0.87897 0.89991 0.83712 0.83299 0.83967 0.90166 0.88212 0.81792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.52 12.77 -35.23 -0.45 0.07 16 2 C -0.07 0.22 2.82 36.01 0.10 0.32 16 3 Si 0.69 -2.81 29.78 -169.99 -5.06 -7.88 16 4 C -0.16 0.41 5.39 -104.60 -0.56 -0.16 16 5 C -0.02 0.11 8.66 -39.61 -0.34 -0.23 16 6 C -0.21 0.86 9.04 -39.43 -0.36 0.50 16 7 C 0.20 -0.01 6.67 -39.22 -0.26 -0.28 16 8 O -0.25 -0.32 7.68 -49.78 -0.38 -0.71 16 9 C 0.03 -0.11 5.22 36.00 0.19 0.07 16 10 C 0.52 -0.42 7.91 -10.99 -0.09 -0.51 16 11 O -0.49 -2.43 16.10 -14.36 -0.23 -2.67 16 12 N -0.71 3.02 5.26 -53.02 -0.28 2.74 16 13 C 0.12 -0.40 4.32 -67.12 -0.29 -0.69 16 14 H 0.11 -0.12 7.47 -51.93 -0.39 -0.51 16 15 C -0.13 0.65 7.29 -25.92 -0.19 0.46 16 16 C -0.08 0.36 3.85 -90.96 -0.35 0.01 16 17 H 0.11 -0.66 8.09 -51.93 -0.42 -1.08 16 18 C -0.01 0.04 5.29 -104.64 -0.55 -0.52 16 19 C -0.16 0.29 8.60 -39.51 -0.34 -0.05 16 20 C 0.14 -0.01 7.30 -39.43 -0.29 -0.29 16 21 F -0.13 -0.18 17.27 2.25 0.04 -0.14 16 22 C -0.20 0.03 10.01 -39.45 -0.39 -0.36 16 23 C 0.14 -0.03 7.30 -39.43 -0.29 -0.32 16 24 F -0.13 -0.14 17.27 2.25 0.04 -0.10 16 25 C -0.16 0.32 9.69 -39.51 -0.38 -0.06 16 26 C -0.14 0.52 7.25 -25.92 -0.19 0.34 16 27 C -0.08 -0.16 6.86 -79.81 -0.55 -0.71 16 28 N 0.03 0.17 4.45 34.03 0.15 0.32 16 29 O -0.18 -1.21 18.45 -29.46 -0.54 -1.76 16 30 O -0.12 -0.95 17.24 -36.49 -0.63 -1.58 16 31 C 0.01 0.00 9.12 -39.60 -0.36 -0.36 16 32 H 0.38 -1.48 8.70 45.56 0.40 -1.09 16 33 H 0.13 -0.46 7.96 -51.93 -0.41 -0.87 16 34 H -0.26 0.67 7.11 56.52 0.40 1.07 16 35 H -0.25 0.04 7.11 56.52 0.40 0.44 16 36 H 0.15 -1.06 4.87 -52.48 -0.26 -1.32 16 37 H 0.16 -1.22 6.30 -52.49 -0.33 -1.55 16 38 H 0.10 -0.73 7.65 -51.93 -0.40 -1.13 16 39 H 0.10 -0.70 7.67 -51.92 -0.40 -1.10 16 40 H 0.40 -3.11 8.70 -40.82 -0.36 -3.46 16 41 H 0.10 -0.47 7.73 -51.93 -0.40 -0.87 16 42 H 0.08 -0.46 8.14 -51.93 -0.42 -0.88 16 43 H 0.15 -0.45 6.64 -52.48 -0.35 -0.80 16 44 H 0.15 -0.16 8.06 -52.48 -0.42 -0.58 16 45 H 0.14 -0.55 8.05 -52.48 -0.42 -0.97 16 46 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 47 H 0.10 -0.35 6.30 -51.93 -0.33 -0.68 16 48 H 0.16 0.02 7.61 -52.49 -0.40 -0.38 16 LS Contribution 421.18 15.07 6.35 6.35 Total: 0.00 -13.18 421.18 -11.42 -24.60 By element: Atomic # 1 Polarization: -11.49 SS G_CDS: -4.93 Total: -16.41 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -5.49 Total: -2.85 kcal Atomic # 7 Polarization: 3.19 SS G_CDS: -0.13 Total: 3.06 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -2.24 Total: -6.64 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.08 Total: -0.24 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: -5.06 Total: -7.88 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -13.18 -11.42 -24.60 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.248 kcal (2) G-P(sol) polarization free energy of solvation -13.177 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.424 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds