Wall clock time and date at job start Tue Mar 9 2021 13:11:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86306 * 109.47035 * 2 1 4 4 C 1.50702 * 109.47354 * 240.00272 * 2 1 3 5 5 C 1.38246 * 119.94619 * 119.97708 * 4 2 1 6 6 C 1.38163 * 120.05518 * 179.76792 * 5 4 2 7 7 C 1.38713 * 119.94034 * 0.48479 * 6 5 4 8 8 O 1.35900 * 120.05168 * 179.79246 * 7 6 5 9 9 C 1.42900 * 117.00346 * 359.72238 * 8 7 6 10 10 C 1.50698 * 109.47675 * 180.02562 * 9 8 7 11 11 O 1.21282 * 119.99364 * 0.02562 * 10 9 8 12 12 N 1.34774 * 120.00600 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00099 * 180.02562 * 12 10 9 14 14 H 1.08994 * 112.91109 * 23.75176 * 13 12 10 15 15 C 1.53787 * 113.61210 * 155.00440 * 13 12 10 16 16 C 1.53778 * 87.08035 * 89.11438 * 15 13 12 17 17 H 1.09004 * 113.61682 * 270.87724 * 16 15 13 18 18 C 1.50699 * 113.61086 * 140.06661 * 16 15 13 19 19 C 1.38206 * 119.97793 * 299.72140 * 18 16 15 20 20 C 1.38472 * 120.03007 * 179.72771 * 19 18 16 21 21 F 1.35097 * 120.01297 * 180.25364 * 20 19 18 22 22 C 1.38416 * 119.97208 * 0.54911 * 20 19 18 23 23 C 1.38423 * 119.94946 * 359.72914 * 22 20 19 24 24 F 1.35101 * 120.01040 * 180.02562 * 23 22 20 25 25 C 1.38215 * 119.97817 * 119.99975 * 18 16 15 26 26 C 1.53778 * 87.08449 * 25.43264 * 16 15 13 27 27 C 1.38744 * 119.89130 * 359.51666 * 7 6 5 28 28 N 1.48003 * 120.02971 * 180.23262 * 27 7 6 29 29 O 1.21800 * 120.00414 * 180.02562 * 28 27 7 30 30 O 1.21804 * 119.99660 * 359.97438 * 28 27 7 31 31 C 1.38127 * 119.94721 * 0.25386 * 27 7 6 32 32 H 0.96697 * 113.99705 * 59.99864 * 1 2 3 33 33 H 1.09001 * 109.46932 * 119.99936 * 2 1 3 34 34 H 1.48498 * 110.00212 * 298.68268 * 3 2 1 35 35 H 1.48506 * 109.99856 * 60.00161 * 3 2 1 36 36 H 1.08003 * 119.97132 * 0.02562 * 5 4 2 37 37 H 1.07994 * 120.02691 * 180.25677 * 6 5 4 38 38 H 1.09005 * 109.47188 * 60.00032 * 9 8 7 39 39 H 1.09008 * 109.47210 * 300.00296 * 9 8 7 40 40 H 0.97002 * 119.99411 * 0.02562 * 12 10 9 41 41 H 1.08998 * 113.61103 * 203.66698 * 15 13 12 42 42 H 1.08997 * 113.61087 * 334.48007 * 15 13 12 43 43 H 1.08003 * 119.98633 * 359.97438 * 19 18 16 44 44 H 1.08004 * 120.02601 * 179.74523 * 22 20 19 45 45 H 1.08004 * 119.98266 * 0.02562 * 25 18 16 46 46 H 1.08993 * 113.61229 * 220.02023 * 26 16 15 47 47 H 1.09000 * 113.61263 * 89.11673 * 26 16 15 48 48 H 1.07996 * 119.97441 * 180.02562 * 31 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7258 -0.0372 -2.1399 6 6 3.1916 -0.6877 -3.2664 7 6 2.8532 -2.0143 -3.4894 8 8 3.3066 -2.6550 -4.5988 9 6 4.1227 -1.8997 -5.4963 10 6 4.5277 -2.7684 -6.6592 11 8 4.1538 -3.9209 -6.7142 12 7 5.3044 -2.2645 -7.6386 13 6 5.6976 -3.1090 -8.7693 14 1 5.0120 -3.9395 -8.9371 15 6 6.0285 -2.3159 -10.0446 16 6 7.4751 -2.2413 -9.5284 17 1 7.6686 -1.3757 -8.8948 18 6 8.5112 -2.4191 -10.6082 19 6 8.5495 -3.5893 -11.3426 20 6 9.4974 -3.7516 -12.3388 21 9 9.5312 -4.8936 -13.0599 22 6 10.4142 -2.7458 -12.5914 23 6 10.3787 -1.5765 -11.8515 24 9 11.2726 -0.5938 -12.0974 25 6 9.4262 -1.4142 -10.8597 26 6 7.1771 -3.5276 -8.7402 27 6 2.0558 -2.6876 -2.5752 28 7 1.6972 -4.1046 -2.8075 29 8 0.9968 -4.6951 -2.0049 30 8 2.1017 -4.6800 -3.8020 31 6 1.5966 -2.0343 -1.4482 32 1 -0.3933 0.4417 -0.7650 33 1 1.7923 -0.5138 0.8900 34 1 1.5879 2.4587 -1.2242 35 1 1.5615 2.4679 1.2086 36 1 2.9859 0.9968 -1.9676 37 1 3.8155 -0.1626 -3.9744 38 1 5.0141 -1.5536 -4.9731 39 1 3.5605 -1.0409 -5.8633 40 1 5.6030 -1.3426 -7.5947 41 1 5.9210 -2.8971 -10.9604 42 1 5.5318 -1.3471 -10.0975 43 1 7.8371 -4.3760 -11.1420 44 1 11.1566 -2.8732 -13.3655 45 1 9.3985 -0.5021 -10.2819 46 1 7.6088 -3.5363 -7.7395 47 1 7.3837 -4.4401 -9.2995 48 1 0.9762 -2.5581 -0.7360 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:27 Heat of formation + Delta-G solvation = -99.137599 kcal Electronic energy + Delta-G solvation = -38644.315300 eV Core-core repulsion = 32886.312800 eV Total energy + Delta-G solvation = -5758.002500 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.126 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -50.07759 -50.04658 -43.27832 -41.85706 -41.41808 -40.36845 -39.45931 -38.52947 -37.61026 -37.44646 -34.67997 -33.46396 -32.28979 -32.01993 -31.34799 -29.77705 -27.80944 -26.73756 -26.68622 -26.25913 -24.22509 -23.90168 -23.07317 -22.77218 -21.92846 -20.55755 -20.37855 -19.76316 -19.14503 -18.98461 -18.62296 -18.43257 -18.18827 -18.10044 -17.55341 -17.41112 -17.24264 -17.04286 -16.85432 -16.68673 -16.37046 -16.35200 -16.16470 -15.90164 -15.67071 -15.50483 -15.35599 -15.32786 -14.78394 -14.65015 -14.12655 -14.01297 -13.81974 -13.69206 -13.66143 -13.46761 -13.20438 -13.06784 -12.92260 -12.76806 -12.69452 -12.37783 -12.33949 -12.26169 -12.20172 -12.06264 -11.80375 -11.67710 -11.29480 -11.00955 -10.82100 -10.74460 -10.13858 -9.89202 -9.80419 -9.77897 -4.90842 -1.30006 -0.22461 -0.09541 -0.07502 0.17221 0.37058 1.22230 1.27951 1.47556 1.61605 2.03610 2.06687 2.26373 2.33320 2.78802 3.12882 3.26452 3.27952 3.36243 3.40015 3.46559 3.59123 3.62198 3.69657 3.73184 3.78265 3.78828 3.91982 3.93370 3.96462 4.07111 4.08470 4.15116 4.30917 4.41105 4.57228 4.62253 4.65751 4.74408 4.76920 4.79806 4.80350 4.85949 4.88348 4.98508 4.99139 5.06892 5.09278 5.14990 5.20935 5.33729 5.59838 5.72868 5.78828 6.42672 6.45714 6.48625 7.19962 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.092 4.092 3 Si 0.790 3.210 4 C -0.148 4.148 5 C -0.004 4.004 6 C -0.187 4.187 7 C 0.195 3.805 8 O -0.293 6.293 9 C 0.024 3.976 10 C 0.510 3.490 11 O -0.566 6.566 12 N -0.689 5.689 13 C 0.115 3.885 14 H 0.080 0.920 15 C -0.123 4.123 16 C -0.063 4.063 17 H 0.135 0.865 18 C -0.009 4.009 19 C -0.162 4.162 20 C 0.115 3.885 21 F -0.143 7.143 22 C -0.207 4.207 23 C 0.117 3.883 24 F -0.140 7.140 25 C -0.151 4.151 26 C -0.146 4.146 27 C -0.105 4.105 28 N 0.034 4.966 29 O -0.207 6.207 30 O -0.172 6.172 31 C -0.004 4.004 32 H 0.389 0.611 33 H 0.126 0.874 34 H -0.260 1.260 35 H -0.310 1.310 36 H 0.189 0.811 37 H 0.209 0.791 38 H 0.148 0.852 39 H 0.145 0.855 40 H 0.425 0.575 41 H 0.097 0.903 42 H 0.100 0.900 43 H 0.154 0.846 44 H 0.149 0.851 45 H 0.168 0.832 46 H 0.076 0.924 47 H 0.092 0.908 48 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.643 15.028 0.207 16.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.199 4.199 3 Si 0.693 3.307 4 C -0.149 4.149 5 C -0.022 4.022 6 C -0.206 4.206 7 C 0.145 3.855 8 O -0.203 6.203 9 C -0.053 4.053 10 C 0.296 3.704 11 O -0.443 6.443 12 N -0.344 5.344 13 C 0.009 3.991 14 H 0.098 0.902 15 C -0.161 4.161 16 C -0.081 4.081 17 H 0.153 0.847 18 C -0.010 4.010 19 C -0.180 4.180 20 C 0.096 3.904 21 F -0.121 7.121 22 C -0.226 4.226 23 C 0.098 3.902 24 F -0.118 7.118 25 C -0.170 4.170 26 C -0.184 4.184 27 C -0.190 4.190 28 N 0.544 4.456 29 O -0.413 6.413 30 O -0.386 6.386 31 C -0.023 4.023 32 H 0.238 0.762 33 H 0.144 0.856 34 H -0.186 1.186 35 H -0.239 1.239 36 H 0.206 0.794 37 H 0.226 0.774 38 H 0.166 0.834 39 H 0.162 0.838 40 H 0.264 0.736 41 H 0.116 0.884 42 H 0.119 0.881 43 H 0.171 0.829 44 H 0.166 0.834 45 H 0.186 0.814 46 H 0.095 0.905 47 H 0.111 0.889 48 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 5.401 15.117 0.707 16.068 hybrid contribution -0.967 -1.222 -0.887 1.793 sum 4.435 13.895 -0.179 14.587 Atomic orbital electron populations 1.86635 1.18554 1.80460 1.50335 1.25534 0.83578 1.13144 0.97605 0.94185 0.89223 0.69856 0.77428 1.20373 1.02189 0.92535 0.99835 1.21729 0.89345 1.01303 0.89799 1.21825 1.06000 0.90399 1.02340 1.18959 0.89566 0.92066 0.84916 1.86471 1.63683 1.39787 1.30317 1.23154 0.98327 0.94432 0.89407 1.20525 0.78278 0.87634 0.83984 1.90863 1.55150 1.20341 1.77915 1.45252 1.51337 1.16435 1.21337 1.21816 0.96086 0.94628 0.86581 0.90179 1.23392 0.93963 1.02248 0.96510 1.21749 0.91815 1.00224 0.94296 0.84702 1.19500 0.94935 0.91215 0.95324 1.21290 0.99957 1.00539 0.96239 1.17467 0.97335 0.82614 0.92993 1.91527 1.95963 1.48050 1.76579 1.21185 1.02988 0.93881 1.04589 1.17475 0.90010 0.85538 0.97200 1.91534 1.66299 1.60384 1.93616 1.21385 0.94876 1.02218 0.98478 1.23594 0.95447 0.97999 1.01408 1.20871 1.13551 0.81455 1.03172 1.43918 0.98201 1.04038 0.99436 1.94508 1.36184 1.68400 1.42235 1.94675 1.56272 1.69405 1.18259 1.20836 0.94170 0.94817 0.92514 0.76158 0.85591 1.18570 1.23906 0.79389 0.77439 0.83432 0.83755 0.73647 0.88418 0.88141 0.82860 0.83358 0.81431 0.90504 0.88947 0.83370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.12 12.77 -148.98 -1.90 -0.78 16 2 C -0.09 0.66 2.82 71.24 0.20 0.86 16 3 Si 0.79 -8.70 29.78 68.60 2.04 -6.66 16 4 C -0.15 1.02 5.39 -19.85 -0.11 0.91 16 5 C 0.00 0.06 8.66 22.25 0.19 0.25 16 6 C -0.19 2.41 9.04 22.37 0.20 2.62 16 7 C 0.19 -0.25 6.67 22.50 0.15 -0.10 16 8 O -0.29 -0.68 7.68 -63.41 -0.49 -1.17 16 9 C 0.02 -0.24 5.22 71.24 0.37 0.13 16 10 C 0.51 -1.11 7.91 87.66 0.69 -0.41 16 11 O -0.57 -7.00 16.10 16.00 0.26 -6.75 16 12 N -0.69 7.16 5.26 -440.04 -2.32 4.84 16 13 C 0.11 -0.80 4.32 45.52 0.20 -0.60 16 14 H 0.08 0.00 7.47 -2.39 -0.02 -0.02 16 15 C -0.12 1.42 7.29 31.12 0.23 1.64 16 16 C -0.06 0.75 3.85 -11.02 -0.04 0.71 16 17 H 0.14 -2.33 8.09 -2.38 -0.02 -2.35 16 18 C -0.01 0.07 5.29 -19.88 -0.11 -0.04 16 19 C -0.16 0.56 8.60 22.32 0.19 0.75 16 20 C 0.12 0.10 7.30 22.37 0.16 0.27 16 21 F -0.14 -0.63 17.27 44.97 0.78 0.14 16 22 C -0.21 -0.12 10.01 22.36 0.22 0.10 16 23 C 0.12 -0.08 7.30 22.37 0.16 0.08 16 24 F -0.14 -0.29 17.27 44.97 0.78 0.49 16 25 C -0.15 0.89 9.69 22.32 0.22 1.10 16 26 C -0.15 1.15 7.25 31.12 0.23 1.37 16 27 C -0.11 -0.61 6.86 36.47 0.25 -0.36 16 28 N 0.03 0.55 4.45 -46.25 -0.21 0.34 16 29 O -0.21 -3.77 18.45 18.89 0.35 -3.42 16 30 O -0.17 -3.55 17.24 25.60 0.44 -3.11 16 31 C 0.00 0.00 9.12 22.26 0.20 0.20 16 32 H 0.39 -3.27 8.70 -74.06 -0.64 -3.92 16 33 H 0.13 -0.95 7.96 -2.39 -0.02 -0.97 16 34 H -0.26 2.60 7.11 99.48 0.71 3.30 16 35 H -0.31 0.21 7.11 99.48 0.71 0.91 16 36 H 0.19 -3.95 4.87 -2.91 -0.01 -3.96 16 37 H 0.21 -4.88 6.30 -2.91 -0.02 -4.90 16 38 H 0.15 -2.88 7.65 -2.38 -0.02 -2.90 16 39 H 0.15 -2.75 7.67 -2.38 -0.02 -2.77 16 40 H 0.42 -8.32 8.70 -92.71 -0.81 -9.12 16 41 H 0.10 -0.97 7.73 -2.39 -0.02 -0.99 16 42 H 0.10 -1.46 8.14 -2.39 -0.02 -1.48 16 43 H 0.15 -0.88 6.64 -2.91 -0.02 -0.90 16 44 H 0.15 -0.07 8.06 -2.91 -0.02 -0.09 16 45 H 0.17 -1.88 8.05 -2.91 -0.02 -1.90 16 46 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 47 H 0.09 -0.59 6.30 -2.39 -0.02 -0.61 16 48 H 0.15 0.48 7.61 -2.91 -0.02 0.45 16 Total: 0.00 -42.37 421.18 3.03 -39.34 By element: Atomic # 1 Polarization: -32.44 SS G_CDS: -0.32 Total: -32.76 kcal Atomic # 6 Polarization: 5.87 SS G_CDS: 3.62 Total: 9.49 kcal Atomic # 7 Polarization: 7.71 SS G_CDS: -2.52 Total: 5.18 kcal Atomic # 8 Polarization: -13.88 SS G_CDS: -1.34 Total: -15.23 kcal Atomic # 9 Polarization: -0.92 SS G_CDS: 1.55 Total: 0.63 kcal Atomic # 14 Polarization: -8.70 SS G_CDS: 2.04 Total: -6.66 kcal Total: -42.37 3.03 -39.34 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.797 kcal (2) G-P(sol) polarization free energy of solvation -42.368 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.340 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds