Wall clock time and date at job start Tue Mar 9 2021 13:11:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35985 * 116.99970 * 2 1 4 4 C 1.38673 * 119.99652 * 180.02562 * 3 2 1 5 5 C 1.38155 * 120.00077 * 180.02562 * 4 3 2 6 6 C 1.50693 * 120.00466 * 179.72261 * 5 4 3 7 7 O 1.42895 * 109.47538 * 255.00317 * 6 5 4 8 8 Si 1.86302 * 109.46871 * 15.00132 * 6 5 4 9 9 C 1.38678 * 119.99899 * 359.97438 * 5 4 3 10 10 O 1.35984 * 120.00359 * 179.97438 * 9 5 4 11 11 C 1.42901 * 117.00091 * 180.02562 * 10 9 5 12 12 C 1.50694 * 109.46957 * 179.97438 * 11 10 9 13 13 O 1.21287 * 120.00188 * 0.02562 * 12 11 10 14 14 N 1.34782 * 119.99941 * 179.97438 * 12 11 10 15 15 C 1.46501 * 119.99711 * 180.02562 * 14 12 11 16 16 H 1.09002 * 112.85403 * 23.80248 * 15 14 12 17 17 C 1.53787 * 113.61169 * 154.99912 * 15 14 12 18 18 C 1.53782 * 87.07876 * 89.11314 * 17 15 14 19 19 H 1.08997 * 113.61765 * 270.79938 * 18 17 15 20 20 C 1.50700 * 113.61133 * 139.98189 * 18 17 15 21 21 C 1.38203 * 119.97534 * 299.71894 * 20 18 17 22 22 C 1.38478 * 120.02946 * 179.76869 * 21 20 18 23 23 F 1.35093 * 120.02033 * 180.25331 * 22 21 20 24 24 C 1.38426 * 119.96840 * 0.53262 * 22 21 20 25 25 C 1.38413 * 119.94946 * 359.72310 * 24 22 21 26 26 F 1.35106 * 120.01157 * 180.02562 * 25 24 22 27 27 C 1.38210 * 119.97494 * 120.00024 * 20 18 17 28 28 C 1.53777 * 113.61140 * 252.49290 * 15 14 12 29 29 C 1.38723 * 119.99749 * 0.02702 * 9 5 4 30 30 C 1.38105 * 120.00359 * 359.94915 * 29 9 5 31 31 H 1.08994 * 109.46775 * 300.00775 * 1 2 3 32 32 H 1.09005 * 109.46899 * 59.99953 * 1 2 3 33 33 H 1.08997 * 109.47467 * 179.97438 * 1 2 3 34 34 H 1.08000 * 120.00666 * 0.03894 * 4 3 2 35 35 H 1.09001 * 109.47240 * 134.99877 * 6 5 4 36 36 H 0.96707 * 113.99472 * 300.00072 * 7 6 5 37 37 H 1.48501 * 110.00251 * 60.00028 * 8 6 5 38 38 H 1.48507 * 109.99950 * 181.32162 * 8 6 5 39 39 H 1.08996 * 109.46870 * 300.00289 * 11 10 9 40 40 H 1.09000 * 109.47318 * 59.99885 * 11 10 9 41 41 H 0.96994 * 119.99941 * 359.97438 * 14 12 11 42 42 H 1.08998 * 113.61240 * 203.66288 * 17 15 14 43 43 H 1.08996 * 113.61368 * 334.56203 * 17 15 14 44 44 H 1.08002 * 119.99093 * 0.02562 * 21 20 18 45 45 H 1.08000 * 120.02099 * 179.74154 * 24 22 21 46 46 H 1.08003 * 119.98546 * 359.97438 * 27 20 18 47 47 H 1.09005 * 113.61605 * 25.43431 * 28 15 14 48 48 H 1.09000 * 113.61584 * 156.33928 * 28 15 14 49 49 H 1.08005 * 119.99936 * 179.97438 * 29 9 5 50 50 H 1.08004 * 120.00698 * 180.02562 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2841 -0.0005 5 6 4.0585 2.5151 0.0000 6 6 5.5634 2.5939 0.0057 7 8 6.0158 2.9690 1.3082 8 14 6.2740 0.9314 -0.4436 9 6 3.3033 3.6782 0.0005 10 8 3.9206 4.8898 0.0016 11 6 3.0807 6.0459 0.0027 12 6 3.9349 7.2873 0.0044 13 8 5.1440 7.1916 0.0042 14 7 3.3553 8.5042 0.0051 15 6 4.1858 9.7110 0.0062 16 1 5.1829 9.5391 -0.3991 17 6 3.4830 10.9429 -0.5887 18 6 2.9644 11.2339 0.8294 19 1 2.0119 10.7535 1.0532 20 6 2.9805 12.6972 1.1895 21 6 4.1739 13.3943 1.1931 22 6 4.1894 14.7400 1.5192 23 9 5.3553 15.4224 1.5177 24 6 3.0104 15.3844 1.8523 25 6 1.8166 14.6840 1.8535 26 9 0.6651 15.3118 2.1780 27 6 1.8028 13.3397 1.5216 28 6 4.1854 10.4578 1.3504 29 6 1.9180 3.6056 0.0011 30 6 1.2909 2.3751 0.0001 31 1 -0.3633 0.5139 0.8899 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3634 -1.0276 -0.0005 34 1 4.0195 0.3784 -0.0016 35 1 5.8910 3.3375 -0.7208 36 1 5.6840 3.8265 1.6080 37 1 5.8110 0.5299 -1.7962 38 1 7.7577 0.9875 -0.4104 39 1 2.4514 6.0385 -0.8873 40 1 2.4514 6.0370 0.8926 41 1 2.3884 8.5808 0.0041 42 1 4.1719 11.6989 -0.9655 43 1 2.6949 10.6950 -1.2996 44 1 5.0943 12.8903 0.9375 45 1 3.0222 16.4330 2.1108 46 1 0.8713 12.7929 1.5225 47 1 3.9641 9.8184 2.2051 48 1 5.0661 11.0813 1.5039 49 1 1.3297 4.5114 0.0019 50 1 0.2123 2.3185 0.0001 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:45 Heat of formation + Delta-G solvation = -139.910229 kcal Electronic energy + Delta-G solvation = -36825.228336 eV Core-core repulsion = 31422.254426 eV Total energy + Delta-G solvation = -5402.973910 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -50.09884 -50.06999 -41.89749 -41.51667 -40.51265 -39.78913 -38.68452 -38.03796 -36.91743 -34.70929 -32.81089 -32.12381 -31.38673 -30.95403 -29.39742 -27.95528 -26.72657 -26.59067 -26.42414 -24.09932 -23.80109 -22.96560 -22.40526 -21.88740 -20.44043 -19.53733 -19.03107 -18.76084 -18.43719 -18.12781 -18.02875 -17.47972 -17.46043 -17.41672 -17.06563 -16.95282 -16.71875 -16.59788 -16.39244 -16.09756 -15.90852 -15.74295 -15.48382 -15.44595 -15.34897 -15.29118 -14.79935 -14.43688 -14.21862 -14.07986 -14.04383 -13.72742 -13.54734 -13.50979 -13.41706 -13.10442 -13.02416 -12.94839 -12.79954 -12.49370 -12.30312 -12.10497 -12.02322 -11.71668 -11.43409 -11.33671 -11.30366 -11.23053 -11.00279 -10.18469 -10.08670 -9.91998 -9.82939 -8.81120 -4.93439 -0.12079 -0.10179 0.07563 0.34466 1.33729 1.42079 1.43798 1.58072 1.91498 2.23714 2.35947 2.55154 2.57624 2.76243 3.24784 3.36649 3.47558 3.55063 3.55636 3.64274 3.74674 3.76103 3.86387 3.88850 3.90248 3.96510 4.05327 4.09425 4.10891 4.11556 4.14567 4.21965 4.28708 4.45840 4.46676 4.57925 4.71014 4.71124 4.73712 4.76079 4.77026 4.80803 4.84371 4.95658 4.96059 4.98252 5.02992 5.10985 5.13245 5.21947 5.29953 5.42746 5.56004 5.70150 6.14127 6.41790 6.47465 6.52867 7.12397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.090 3.910 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.080 4.080 7 O -0.545 6.545 8 Si 0.809 3.191 9 C 0.090 3.910 10 O -0.317 6.317 11 C 0.037 3.963 12 C 0.516 3.484 13 O -0.570 6.570 14 N -0.691 5.691 15 C 0.115 3.885 16 H 0.083 0.917 17 C -0.124 4.124 18 C -0.064 4.064 19 H 0.131 0.869 20 C -0.010 4.010 21 C -0.161 4.161 22 C 0.116 3.884 23 F -0.142 7.142 24 C -0.206 4.206 25 C 0.117 3.883 26 F -0.140 7.140 27 C -0.153 4.153 28 C -0.144 4.144 29 C -0.158 4.158 30 C -0.161 4.161 31 H 0.068 0.932 32 H 0.066 0.934 33 H 0.114 0.886 34 H 0.151 0.849 35 H 0.062 0.938 36 H 0.372 0.628 37 H -0.265 1.265 38 H -0.295 1.295 39 H 0.124 0.876 40 H 0.128 0.872 41 H 0.422 0.578 42 H 0.100 0.900 43 H 0.098 0.902 44 H 0.155 0.845 45 H 0.150 0.850 46 H 0.166 0.834 47 H 0.076 0.924 48 H 0.095 0.905 49 H 0.169 0.831 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.005 -0.714 -0.631 11.046 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.045 3.955 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.188 4.188 7 O -0.351 6.351 8 Si 0.710 3.290 9 C 0.045 3.955 10 O -0.230 6.230 11 C -0.041 4.041 12 C 0.302 3.698 13 O -0.448 6.448 14 N -0.345 5.345 15 C 0.009 3.991 16 H 0.101 0.899 17 C -0.162 4.162 18 C -0.083 4.083 19 H 0.149 0.851 20 C -0.010 4.010 21 C -0.179 4.179 22 C 0.097 3.903 23 F -0.120 7.120 24 C -0.226 4.226 25 C 0.098 3.902 26 F -0.118 7.118 27 C -0.171 4.171 28 C -0.183 4.183 29 C -0.177 4.177 30 C -0.180 4.180 31 H 0.086 0.914 32 H 0.085 0.915 33 H 0.132 0.868 34 H 0.168 0.832 35 H 0.080 0.920 36 H 0.220 0.780 37 H -0.190 1.190 38 H -0.223 1.223 39 H 0.141 0.859 40 H 0.145 0.855 41 H 0.261 0.739 42 H 0.118 0.882 43 H 0.116 0.884 44 H 0.173 0.827 45 H 0.167 0.833 46 H 0.183 0.817 47 H 0.094 0.906 48 H 0.113 0.887 49 H 0.186 0.814 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -9.082 -1.878 -1.215 9.354 hybrid contribution -0.663 2.669 -0.163 2.755 sum -9.745 0.792 -1.378 9.874 Atomic orbital electron populations 1.23354 0.76380 1.05600 1.02376 1.86089 1.23397 1.26368 1.88941 1.18986 0.91930 0.85385 0.99217 1.20180 0.92452 0.96789 1.04312 1.19444 0.95972 0.91043 1.05544 1.25478 0.92938 1.12377 0.87973 1.86665 1.74373 1.42187 1.31888 0.92230 0.76247 0.79132 0.81353 1.18782 0.91725 0.84221 1.00737 1.86085 1.35574 1.11938 1.89448 1.22733 0.92619 0.81802 1.06950 1.20526 0.88299 0.85453 0.75511 1.90784 1.16796 1.87315 1.49880 1.45314 1.11153 1.03525 1.74545 1.21834 0.95597 0.83950 0.97681 0.89907 1.23403 1.01015 0.95879 0.95886 1.21741 1.00691 0.88915 0.96906 0.85077 1.19481 0.90663 0.96226 0.94623 1.21282 1.00979 0.91943 1.03737 1.17454 0.80850 0.90787 1.01203 1.91528 1.46372 1.80060 1.94065 1.21186 0.91141 1.02810 1.07423 1.17472 0.81056 0.91601 1.00072 1.91536 1.47438 1.82730 1.90134 1.21379 1.01049 0.92286 1.02403 1.23591 0.98559 0.98563 0.97582 1.21378 0.92010 1.00030 1.04257 1.21427 1.01598 0.90938 1.04037 0.91378 0.91531 0.86796 0.83183 0.92024 0.77967 1.19007 1.22253 0.85857 0.85454 0.73911 0.88163 0.88398 0.82726 0.83267 0.81657 0.90573 0.88660 0.81355 0.82109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.51 10.50 -93.38 -0.98 -1.49 16 3 C 0.09 0.17 6.69 22.49 0.15 0.32 16 4 C -0.12 -0.45 8.60 22.35 0.19 -0.26 16 5 C -0.12 -0.61 5.28 -19.78 -0.10 -0.72 16 6 C -0.08 -0.60 2.33 71.23 0.17 -0.44 16 7 O -0.54 -5.05 12.65 -148.98 -1.89 -6.93 16 8 Si 0.81 4.08 30.17 68.60 2.07 6.15 16 9 C 0.09 0.19 6.61 22.49 0.15 0.34 16 10 O -0.32 -0.91 8.55 -74.34 -0.64 -1.55 16 11 C 0.04 -0.24 5.22 71.23 0.37 0.13 16 12 C 0.52 -0.51 7.91 87.65 0.69 0.19 16 13 O -0.57 -6.35 16.10 15.99 0.26 -6.09 16 14 N -0.69 5.93 5.26 -440.03 -2.32 3.61 16 15 C 0.11 -0.72 4.32 45.52 0.20 -0.52 16 16 H 0.08 -0.01 7.46 -2.39 -0.02 -0.03 16 17 C -0.12 1.30 7.29 31.12 0.23 1.53 16 18 C -0.06 0.70 3.86 -11.01 -0.04 0.65 16 19 H 0.13 -2.01 8.09 -2.39 -0.02 -2.03 16 20 C -0.01 0.06 5.29 -19.88 -0.11 -0.05 16 21 C -0.16 0.51 8.60 22.32 0.19 0.70 16 22 C 0.12 0.13 7.30 22.37 0.16 0.29 16 23 F -0.14 -0.63 17.27 44.97 0.78 0.15 16 24 C -0.21 -0.20 10.01 22.36 0.22 0.03 16 25 C 0.12 0.00 7.30 22.37 0.16 0.16 16 26 F -0.14 -0.39 17.27 44.97 0.78 0.39 16 27 C -0.15 0.74 9.69 22.32 0.22 0.96 16 28 C -0.14 1.06 7.25 31.12 0.23 1.28 16 29 C -0.16 0.61 9.03 22.35 0.20 0.81 16 30 C -0.16 0.48 9.03 22.35 0.20 0.68 16 31 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 32 H 0.07 -0.58 7.66 -2.38 -0.02 -0.60 16 33 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 34 H 0.15 0.18 5.12 -2.91 -0.01 0.17 16 35 H 0.06 0.62 7.83 -2.39 -0.02 0.60 16 36 H 0.37 2.45 8.58 -74.05 -0.64 1.82 16 37 H -0.26 -1.85 7.11 99.48 0.71 -1.14 16 38 H -0.29 -3.38 7.11 99.48 0.71 -2.68 16 39 H 0.12 -1.55 7.66 -2.39 -0.02 -1.57 16 40 H 0.13 -1.68 7.66 -2.39 -0.02 -1.70 16 41 H 0.42 -6.99 8.70 -92.71 -0.81 -7.80 16 42 H 0.10 -0.95 7.73 -2.39 -0.02 -0.97 16 43 H 0.10 -1.28 8.14 -2.39 -0.02 -1.30 16 44 H 0.16 -0.89 6.64 -2.91 -0.02 -0.91 16 45 H 0.15 -0.04 8.06 -2.91 -0.02 -0.06 16 46 H 0.17 -1.62 8.05 -2.91 -0.02 -1.64 16 47 H 0.08 -0.46 8.14 -2.38 -0.02 -0.48 16 48 H 0.10 -0.61 6.29 -2.39 -0.02 -0.63 16 49 H 0.17 -2.00 6.29 -2.91 -0.02 -2.02 16 50 H 0.16 -1.41 6.29 -2.91 -0.02 -1.43 16 Total: 0.00 -27.03 423.59 2.29 -24.74 By element: Atomic # 1 Polarization: -25.70 SS G_CDS: -0.37 Total: -26.06 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: 4.59 Total: 7.09 kcal Atomic # 7 Polarization: 5.93 SS G_CDS: -2.32 Total: 3.61 kcal Atomic # 8 Polarization: -12.82 SS G_CDS: -3.24 Total: -16.07 kcal Atomic # 9 Polarization: -1.02 SS G_CDS: 1.55 Total: 0.54 kcal Atomic # 14 Polarization: 4.08 SS G_CDS: 2.07 Total: 6.15 kcal Total: -27.03 2.29 -24.74 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.169 kcal (2) G-P(sol) polarization free energy of solvation -27.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.741 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.910 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds