Wall clock time and date at job start Tue Mar 9 2021 13:11:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35993 * 116.99687 * 2 1 4 4 C 1.39153 * 120.07026 * 180.02562 * 3 2 1 5 5 O 1.35989 * 120.07556 * 359.97438 * 4 3 2 6 6 C 1.42900 * 117.00413 * 179.97438 * 5 4 3 7 7 C 1.50696 * 109.47362 * 180.02562 * 6 5 4 8 8 O 1.21287 * 120.00202 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99967 * 180.02562 * 7 6 5 10 10 C 1.46502 * 120.00134 * 180.02562 * 9 7 6 11 11 H 1.09010 * 112.84865 * 334.66856 * 10 9 7 12 12 C 1.53775 * 113.61479 * 105.86001 * 10 9 7 13 13 C 1.54056 * 86.98497 * 89.16342 * 12 10 9 14 14 H 1.08994 * 113.61469 * 270.88740 * 13 12 10 15 15 C 1.50700 * 113.61926 * 139.97662 * 13 12 10 16 16 C 1.38206 * 119.97446 * 322.23619 * 15 13 12 17 17 C 1.38480 * 120.02473 * 179.72594 * 16 15 13 18 18 F 1.35090 * 120.01722 * 180.25045 * 17 16 15 19 19 C 1.38418 * 119.97178 * 0.54733 * 17 16 15 20 20 C 1.38420 * 119.95244 * 359.72297 * 19 17 16 21 21 F 1.35101 * 120.01932 * 180.02562 * 20 19 17 22 22 C 1.38214 * 119.97337 * 142.50652 * 15 13 12 23 23 C 1.53783 * 113.61703 * 203.47236 * 10 9 7 24 24 C 1.38563 * 119.85224 * 179.97438 * 4 3 2 25 25 C 1.38245 * 120.00301 * 359.72280 * 24 4 3 26 26 C 1.38261 * 120.14178 * 0.54753 * 25 24 4 27 27 C 1.50699 * 119.92538 * 179.72723 * 26 25 24 28 28 O 1.42892 * 109.47249 * 119.73101 * 27 26 25 29 29 Si 1.86298 * 109.47032 * 359.72486 * 27 26 25 30 30 C 1.38242 * 120.14400 * 359.45608 * 26 25 24 31 31 H 1.09004 * 109.46734 * 179.97438 * 1 2 3 32 32 H 1.08995 * 109.47278 * 300.00059 * 1 2 3 33 33 H 1.09002 * 109.46994 * 60.00277 * 1 2 3 34 34 H 1.08992 * 109.47341 * 300.00830 * 6 5 4 35 35 H 1.09005 * 109.46619 * 60.00372 * 6 5 4 36 36 H 0.96999 * 119.99997 * 0.02562 * 9 7 6 37 37 H 1.09000 * 113.61810 * 203.66657 * 12 10 9 38 38 H 1.08998 * 113.61811 * 334.57213 * 12 10 9 39 39 H 1.07998 * 119.98915 * 359.97438 * 16 15 13 40 40 H 1.07997 * 120.02966 * 179.75202 * 19 17 16 41 41 H 1.07998 * 119.98338 * 0.02562 * 22 15 13 42 42 H 1.08998 * 113.60864 * 25.43027 * 23 10 9 43 43 H 1.09000 * 113.61133 * 156.24953 * 23 10 9 44 44 H 1.08008 * 119.99970 * 179.97438 * 24 4 3 45 45 H 1.07998 * 119.93124 * 180.29656 * 25 24 4 46 46 H 1.09004 * 109.46453 * 239.73169 * 27 26 25 47 47 H 0.96703 * 114.00176 * 299.99748 * 28 27 26 48 48 H 1.48506 * 109.99834 * 58.68765 * 29 27 26 49 49 H 1.48502 * 110.00011 * 180.02562 * 29 27 26 50 50 H 1.08001 * 119.99775 * 180.25292 * 30 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1478 -0.0005 6 6 5.6003 0.3007 -0.0017 7 6 6.2519 -1.0581 -0.0021 8 8 5.5670 -2.0591 -0.0020 9 7 7.5957 -1.1610 -0.0027 10 6 8.2292 -2.4820 -0.0037 11 1 7.5937 -3.2565 0.4259 12 6 8.8423 -2.8701 -1.3595 13 6 10.1376 -2.1905 -0.8764 14 1 10.1881 -1.1280 -1.1142 15 6 11.3898 -2.9372 -1.2580 16 6 11.4039 -4.3190 -1.2349 17 6 12.5522 -5.0063 -1.5908 18 9 12.5642 -6.3570 -1.5730 19 6 13.6896 -4.3086 -1.9590 20 6 13.6760 -2.9245 -1.9764 21 9 14.7852 -2.2422 -2.3360 22 6 12.5249 -2.2395 -1.6255 23 6 9.6612 -2.4790 0.5570 24 6 4.0602 2.5234 -0.0011 25 6 3.3028 3.6799 -0.0069 26 6 1.9222 3.6058 -0.0007 27 6 1.1015 4.8696 -0.0008 28 8 0.2767 4.9018 -1.1673 29 14 2.2364 6.3470 -0.0016 30 6 1.2931 2.3748 -0.0001 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8899 33 1 -0.3633 0.5138 -0.8900 34 1 5.9059 0.8502 -0.8920 35 1 5.9071 0.8509 0.8879 36 1 8.1435 -0.3605 -0.0024 37 1 8.9408 -3.9463 -1.5022 38 1 8.3760 -2.3706 -2.2087 39 1 10.5178 -4.8630 -0.9430 40 1 14.5869 -4.8436 -2.2329 41 1 12.5141 -1.1596 -1.6386 42 1 9.8553 -1.6638 1.2541 43 1 9.9826 -3.4481 0.9387 44 1 5.1386 2.5841 -0.0011 45 1 3.7906 4.6434 -0.0121 46 1 0.4730 4.8947 0.8894 47 1 0.7702 4.8821 -1.9986 48 1 3.1206 6.3077 -1.1941 49 1 1.4391 7.5999 -0.0011 50 1 0.2145 2.3196 0.0006 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:57 Heat of formation + Delta-G solvation = -136.362574 kcal Electronic energy + Delta-G solvation = -36535.467838 eV Core-core repulsion = 31132.647766 eV Total energy + Delta-G solvation = -5402.820072 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -50.08259 -50.05350 -41.86789 -41.50179 -40.43190 -39.37911 -38.95275 -38.46960 -37.01009 -34.67143 -32.23586 -31.87148 -31.43567 -31.33116 -29.50158 -28.45145 -26.70013 -26.50837 -26.08216 -24.01819 -23.67226 -22.98736 -22.54961 -21.81099 -20.41265 -19.80129 -18.97695 -18.58258 -18.32933 -18.11541 -17.93029 -17.50745 -17.41559 -17.20935 -17.04850 -16.88443 -16.69505 -16.66443 -16.37568 -16.13858 -15.90942 -15.84723 -15.79403 -15.45195 -15.41583 -15.26702 -14.87851 -14.56721 -14.29657 -14.05541 -13.76522 -13.69956 -13.55505 -13.50359 -13.40789 -13.08002 -12.92692 -12.77211 -12.59877 -12.57286 -12.16048 -12.14804 -12.07595 -11.98314 -11.69676 -11.63621 -11.30141 -10.98984 -10.61638 -10.14897 -9.89899 -9.80999 -9.76670 -8.90299 -4.87738 -0.10176 -0.08234 0.18273 0.29498 1.34459 1.46732 1.49148 1.64882 2.01008 2.25665 2.32001 2.57280 2.58439 2.78077 3.26777 3.39050 3.40801 3.54272 3.57870 3.66455 3.68092 3.77777 3.87869 3.91050 3.91720 3.94102 4.07189 4.07779 4.13844 4.15832 4.16192 4.29997 4.30773 4.37498 4.57983 4.60716 4.66256 4.67174 4.73428 4.75855 4.78619 4.79428 4.87371 4.97818 4.98528 5.02399 5.05247 5.14006 5.14311 5.32866 5.38415 5.58082 5.61799 5.72093 5.98526 6.43729 6.49747 6.56440 7.17808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.335 6.335 3 C 0.076 3.924 4 C 0.086 3.914 5 O -0.315 6.315 6 C 0.034 3.966 7 C 0.514 3.486 8 O -0.573 6.573 9 N -0.690 5.690 10 C 0.114 3.886 11 H 0.081 0.919 12 C -0.146 4.146 13 C -0.064 4.064 14 H 0.132 0.868 15 C -0.009 4.009 16 C -0.161 4.161 17 C 0.116 3.884 18 F -0.142 7.142 19 C -0.206 4.206 20 C 0.117 3.883 21 F -0.140 7.140 22 C -0.152 4.152 23 C -0.122 4.122 24 C -0.159 4.159 25 C -0.110 4.110 26 C -0.117 4.117 27 C -0.086 4.086 28 O -0.551 6.551 29 Si 0.777 3.223 30 C -0.153 4.153 31 H 0.110 0.890 32 H 0.065 0.935 33 H 0.061 0.939 34 H 0.128 0.872 35 H 0.131 0.869 36 H 0.423 0.577 37 H 0.095 0.905 38 H 0.073 0.927 39 H 0.155 0.845 40 H 0.149 0.851 41 H 0.166 0.834 42 H 0.100 0.900 43 H 0.101 0.899 44 H 0.178 0.822 45 H 0.159 0.841 46 H 0.122 0.878 47 H 0.386 0.614 48 H -0.275 1.275 49 H -0.308 1.308 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.089 6.994 2.619 8.514 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.030 3.970 4 C 0.040 3.960 5 O -0.229 6.229 6 C -0.044 4.044 7 C 0.301 3.699 8 O -0.451 6.451 9 N -0.345 5.345 10 C 0.009 3.991 11 H 0.100 0.900 12 C -0.184 4.184 13 C -0.082 4.082 14 H 0.150 0.850 15 C -0.010 4.010 16 C -0.179 4.179 17 C 0.097 3.903 18 F -0.120 7.120 19 C -0.226 4.226 20 C 0.098 3.902 21 F -0.118 7.118 22 C -0.171 4.171 23 C -0.160 4.160 24 C -0.177 4.177 25 C -0.127 4.127 26 C -0.117 4.117 27 C -0.194 4.194 28 O -0.359 6.359 29 Si 0.682 3.318 30 C -0.172 4.172 31 H 0.129 0.871 32 H 0.084 0.916 33 H 0.080 0.920 34 H 0.145 0.855 35 H 0.149 0.851 36 H 0.262 0.738 37 H 0.113 0.887 38 H 0.092 0.908 39 H 0.173 0.827 40 H 0.167 0.833 41 H 0.184 0.816 42 H 0.118 0.882 43 H 0.119 0.881 44 H 0.195 0.805 45 H 0.176 0.824 46 H 0.140 0.860 47 H 0.235 0.765 48 H -0.201 1.201 49 H -0.237 1.237 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.440 6.569 2.637 7.870 hybrid contribution -0.187 -0.654 -1.410 1.566 sum 3.253 5.914 1.227 6.861 Atomic orbital electron populations 1.23274 0.76871 1.05169 1.02051 1.86189 1.22940 1.26688 1.89109 1.18679 0.89989 0.85554 1.02737 1.18582 0.88138 0.86580 1.02668 1.86221 1.18329 1.29032 1.89277 1.22799 0.79277 0.95135 1.07196 1.20577 0.83033 0.90817 0.75480 1.90785 1.64154 1.40234 1.49881 1.45303 1.04965 1.09607 1.74596 1.21838 0.94301 0.85333 0.97655 0.90040 1.23646 0.95216 1.01998 0.97590 1.21790 0.88905 1.00648 0.96879 0.85023 1.19483 0.94978 0.91906 0.94588 1.21282 0.97920 0.95119 1.03616 1.17450 0.94958 0.76809 1.01091 1.91526 1.97080 1.29321 1.94111 1.21181 1.00272 0.93776 1.07343 1.17472 0.83865 0.89107 0.99767 1.91534 1.51340 1.79684 1.89283 1.21382 0.90904 1.02571 1.02231 1.23387 0.92014 1.04824 0.95747 1.21390 1.02330 0.89212 1.04742 1.21020 0.92343 0.99080 1.00271 1.20129 0.94521 0.94639 1.02455 1.25324 1.00687 1.02386 0.90964 1.86565 1.36816 1.95825 1.16705 0.94020 0.78060 0.72244 0.87478 1.21001 1.00480 0.90599 1.05096 0.87121 0.91632 0.92000 0.85460 0.85121 0.73794 0.88704 0.90800 0.82745 0.83279 0.81623 0.88174 0.88095 0.80476 0.82365 0.86032 0.76471 1.20114 1.23661 0.84251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.04 9.81 113.37 1.11 1.16 16 2 O -0.33 -3.53 10.28 -79.61 -0.82 -4.35 16 3 C 0.08 0.55 6.70 22.57 0.15 0.70 16 4 C 0.09 0.36 6.70 22.57 0.15 0.51 16 5 O -0.31 -2.20 9.45 -67.01 -0.63 -2.83 16 6 C 0.03 -0.16 5.22 71.23 0.37 0.21 16 7 C 0.51 0.54 7.91 87.66 0.69 1.23 16 8 O -0.57 -8.07 16.12 15.98 0.26 -7.81 16 9 N -0.69 5.20 5.26 -440.02 -2.32 2.88 16 10 C 0.11 -0.62 4.29 45.52 0.20 -0.42 16 11 H 0.08 0.06 7.50 -2.38 -0.02 0.04 16 12 C -0.15 0.93 7.27 31.21 0.23 1.16 16 13 C -0.06 0.66 3.87 -10.92 -0.04 0.62 16 14 H 0.13 -1.97 8.09 -2.39 -0.02 -1.99 16 15 C -0.01 0.05 5.29 -19.88 -0.11 -0.05 16 16 C -0.16 0.47 8.58 22.32 0.19 0.66 16 17 C 0.12 0.15 7.30 22.37 0.16 0.31 16 18 F -0.14 -0.65 17.27 44.97 0.78 0.13 16 19 C -0.21 -0.23 10.01 22.36 0.22 -0.01 16 20 C 0.12 0.02 7.30 22.37 0.16 0.18 16 21 F -0.14 -0.41 17.27 44.97 0.78 0.37 16 22 C -0.15 0.71 9.69 22.32 0.22 0.93 16 23 C -0.12 1.25 7.28 31.12 0.23 1.48 16 24 C -0.16 0.65 9.04 22.35 0.20 0.85 16 25 C -0.11 0.49 8.66 22.28 0.19 0.68 16 26 C -0.12 0.09 5.39 -19.86 -0.11 -0.02 16 27 C -0.09 0.17 2.82 71.24 0.20 0.37 16 28 O -0.55 -0.89 12.77 -148.98 -1.90 -2.79 16 29 Si 0.78 -3.64 29.78 68.60 2.04 -1.59 16 30 C -0.15 -0.48 8.60 22.35 0.19 -0.29 16 31 H 0.11 -0.05 8.14 -2.38 -0.02 -0.07 16 32 H 0.07 -0.03 7.66 -2.39 -0.02 -0.05 16 33 H 0.06 0.02 7.66 -2.39 -0.02 0.00 16 34 H 0.13 -1.50 7.66 -2.39 -0.02 -1.52 16 35 H 0.13 -1.59 7.66 -2.38 -0.02 -1.61 16 36 H 0.42 -6.78 8.70 -92.71 -0.81 -7.58 16 37 H 0.09 -0.53 6.33 -2.39 -0.02 -0.55 16 38 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 39 H 0.15 -0.84 6.67 -2.91 -0.02 -0.86 16 40 H 0.15 -0.02 8.06 -2.91 -0.02 -0.04 16 41 H 0.17 -1.59 8.05 -2.91 -0.02 -1.62 16 42 H 0.10 -1.32 8.14 -2.39 -0.02 -1.34 16 43 H 0.10 -0.95 7.72 -2.39 -0.02 -0.96 16 44 H 0.18 -2.26 6.30 -2.91 -0.02 -2.28 16 45 H 0.16 -1.60 4.87 -2.91 -0.01 -1.61 16 46 H 0.12 -0.37 7.96 -2.38 -0.02 -0.39 16 47 H 0.39 -1.53 8.70 -74.06 -0.64 -2.17 16 48 H -0.27 0.55 7.11 99.48 0.71 1.26 16 49 H -0.31 -1.21 7.11 99.48 0.71 -0.50 16 50 H 0.14 0.28 6.30 -2.91 -0.02 0.26 16 Total: 0.00 -32.09 424.47 2.43 -29.66 By element: Atomic # 1 Polarization: -23.57 SS G_CDS: -0.38 Total: -23.94 kcal Atomic # 6 Polarization: 5.65 SS G_CDS: 4.62 Total: 10.27 kcal Atomic # 7 Polarization: 5.20 SS G_CDS: -2.32 Total: 2.88 kcal Atomic # 8 Polarization: -14.68 SS G_CDS: -3.10 Total: -17.77 kcal Atomic # 9 Polarization: -1.06 SS G_CDS: 1.55 Total: 0.49 kcal Atomic # 14 Polarization: -3.64 SS G_CDS: 2.04 Total: -1.59 kcal Total: -32.09 2.43 -29.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.702 kcal (2) G-P(sol) polarization free energy of solvation -32.089 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.428 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.661 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds