Wall clock time and date at job start Tue Mar 9 2021 13:12:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86308 * 109.47062 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00100 * 2 1 3 5 5 C 1.38240 * 119.94224 * 244.97796 * 4 2 1 6 6 C 1.38184 * 120.07120 * 179.69984 * 5 4 2 7 7 C 1.38681 * 119.95336 * 0.60075 * 6 5 4 8 8 O 1.35914 * 120.05820 * 179.69763 * 7 6 5 9 9 C 1.42906 * 116.99892 * 359.72796 * 8 7 6 10 10 C 1.50706 * 109.46702 * 179.97438 * 9 8 7 11 11 O 1.21279 * 120.00072 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99762 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.84597 * 336.20253 * 13 12 10 15 15 C 1.53783 * 113.61176 * 107.50310 * 13 12 10 16 16 C 1.53780 * 87.08087 * 89.12298 * 15 13 12 17 17 H 1.09004 * 113.61164 * 270.88728 * 16 15 13 18 18 C 1.50696 * 113.69438 * 139.99167 * 16 15 13 19 19 C 1.38206 * 119.97194 * 322.18841 * 18 16 15 20 20 C 1.38477 * 120.02369 * 179.72880 * 19 18 16 21 21 F 1.35097 * 120.01267 * 180.25529 * 20 19 18 22 22 C 1.38423 * 119.97274 * 0.54277 * 20 19 18 23 23 C 1.38417 * 119.94896 * 359.73009 * 22 20 19 24 24 F 1.35102 * 120.01376 * 180.02562 * 23 22 20 25 25 C 1.38209 * 119.97607 * 142.46554 * 18 16 15 26 26 C 1.53772 * 113.61760 * 205.00304 * 13 12 10 27 27 C 1.38827 * 119.87896 * 359.42520 * 7 6 5 28 28 Br 1.89106 * 120.03375 * 180.25546 * 27 7 6 29 29 C 1.38194 * 119.93365 * 0.27594 * 27 7 6 30 30 H 0.96697 * 114.00387 * 299.99880 * 1 2 3 31 31 H 1.09002 * 109.47612 * 240.00529 * 2 1 3 32 32 H 1.48501 * 109.99956 * 300.00242 * 3 2 1 33 33 H 1.48504 * 109.99543 * 61.31998 * 3 2 1 34 34 H 1.07999 * 119.96302 * 0.02562 * 5 4 2 35 35 H 1.08000 * 120.02345 * 180.32422 * 6 5 4 36 36 H 1.09000 * 109.46890 * 59.99977 * 9 8 7 37 37 H 1.09000 * 109.47141 * 299.99620 * 9 8 7 38 38 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 39 39 H 1.09002 * 113.61009 * 203.66947 * 15 13 12 40 40 H 1.08998 * 113.61477 * 334.57012 * 15 13 12 41 41 H 1.08003 * 119.98903 * 359.97438 * 19 18 16 42 42 H 1.08000 * 120.02143 * 179.75096 * 22 20 19 43 43 H 1.07997 * 119.98740 * 0.02562 * 25 18 16 44 44 H 1.09006 * 113.61862 * 25.43396 * 26 13 12 45 45 H 1.09001 * 113.61811 * 156.25393 * 26 13 12 46 46 H 1.07995 * 119.98071 * 180.02562 * 29 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6390 -0.0112 2.1903 6 6 3.0955 -0.6586 3.3225 7 6 2.8541 -2.0139 3.4900 8 8 3.3075 -2.6542 4.5999 9 6 4.0309 -1.8704 5.5509 10 6 4.4501 -2.7430 6.7059 11 8 4.1577 -3.9200 6.7141 12 7 5.1499 -2.2154 7.7298 13 6 5.5570 -3.0634 8.8528 14 1 4.9246 -3.9435 8.9695 15 6 7.0624 -3.3769 8.8740 16 6 7.2372 -2.0969 9.7081 17 1 7.3937 -1.2016 9.1064 18 6 8.2398 -2.2340 10.8248 19 6 8.3239 -3.4161 11.5359 20 6 9.2487 -3.5452 12.5585 21 9 9.3342 -4.7026 13.2501 22 6 10.0813 -2.4859 12.8758 23 6 9.9922 -1.3006 12.1666 24 9 10.8046 -0.2660 12.4749 25 6 9.0706 -1.1756 11.1408 26 6 5.7801 -2.2874 10.1615 27 6 2.1437 -2.7143 2.5246 28 35 1.8057 -4.5610 2.7519 29 6 1.6840 -2.0608 1.3970 30 1 -0.3934 0.4417 0.7650 31 1 1.7924 -0.5137 -0.8900 32 1 1.5614 2.4680 -1.2085 33 1 1.5878 2.4585 1.2243 34 1 2.8307 1.0433 2.0576 35 1 3.6438 -0.1105 4.0744 36 1 3.3945 -1.0647 5.9169 37 1 4.9156 -1.4471 5.0751 38 1 5.3835 -1.2739 7.7234 39 1 7.3107 -4.2890 9.4167 40 1 7.5328 -3.3259 7.8921 41 1 7.6709 -4.2409 11.2913 42 1 10.8000 -2.5844 13.6759 43 1 9.0006 -0.2507 10.5877 44 1 5.2155 -1.3567 10.2191 45 1 5.6767 -2.9012 11.0563 46 1 1.1309 -2.6048 0.6458 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:02 Heat of formation + Delta-G solvation = -98.486078 kcal Electronic energy + Delta-G solvation = -34079.730019 eV Core-core repulsion = 28812.954204 eV Total energy + Delta-G solvation = -5266.775815 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.042 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -50.06854 -50.04640 -41.96516 -41.51360 -40.38975 -39.33336 -38.59797 -37.37226 -34.79441 -33.62799 -32.26677 -31.98215 -31.46171 -30.51060 -29.69679 -27.00276 -26.78120 -26.31494 -24.28960 -23.97997 -23.15574 -22.52493 -21.99531 -20.61469 -19.72654 -19.07544 -18.61742 -18.27043 -18.17950 -17.66719 -17.55737 -17.31944 -17.10242 -17.05274 -16.76980 -16.45910 -16.35153 -16.21260 -16.07003 -15.80061 -15.55775 -15.48346 -15.35930 -14.94060 -14.79158 -14.48436 -14.32560 -13.96931 -13.87577 -13.81385 -13.72284 -13.65567 -13.22539 -13.02590 -12.90427 -12.47393 -12.34856 -12.31571 -12.29450 -11.92136 -11.84294 -11.77571 -11.56423 -11.09871 -11.02544 -10.67477 -10.32912 -10.02242 -10.00779 -9.89120 -9.37917 -5.07353 -0.20504 -0.17493 -0.12550 0.03181 0.69390 1.18124 1.22241 1.35025 1.46940 1.87338 2.14344 2.29849 2.31188 2.70008 3.08025 3.20462 3.25340 3.27893 3.36483 3.39002 3.47766 3.54680 3.59303 3.62255 3.64255 3.74951 3.75380 3.77516 3.83980 3.93775 3.99094 4.24664 4.35264 4.44267 4.46342 4.51660 4.53151 4.57422 4.60675 4.67839 4.73547 4.75449 4.82114 4.86609 4.87037 4.87582 5.12901 5.13487 5.32326 5.37700 5.61645 5.91570 6.19171 6.31817 6.96445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.071 4.071 3 Si 0.686 3.314 4 C -0.150 4.150 5 C -0.062 4.062 6 C -0.201 4.201 7 C 0.161 3.839 8 O -0.274 6.274 9 C 0.037 3.963 10 C 0.519 3.481 11 O -0.502 6.502 12 N -0.711 5.711 13 C 0.122 3.878 14 H 0.110 0.890 15 C -0.144 4.144 16 C -0.076 4.076 17 H 0.106 0.894 18 C -0.013 4.013 19 C -0.163 4.163 20 C 0.137 3.863 21 F -0.129 7.129 22 C -0.197 4.197 23 C 0.135 3.865 24 F -0.129 7.129 25 C -0.161 4.161 26 C -0.134 4.134 27 C -0.123 4.123 28 Br -0.024 7.024 29 C -0.023 4.023 30 H 0.376 0.624 31 H 0.121 0.879 32 H -0.255 1.255 33 H -0.259 1.259 34 H 0.137 0.863 35 H 0.141 0.859 36 H 0.098 0.902 37 H 0.099 0.901 38 H 0.403 0.597 39 H 0.099 0.901 40 H 0.080 0.920 41 H 0.145 0.855 42 H 0.149 0.851 43 H 0.143 0.857 44 H 0.082 0.918 45 H 0.102 0.898 46 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.649 6.484 0.386 7.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.181 4.181 3 Si 0.587 3.413 4 C -0.151 4.151 5 C -0.080 4.080 6 C -0.220 4.220 7 C 0.112 3.888 8 O -0.185 6.185 9 C -0.042 4.042 10 C 0.303 3.697 11 O -0.375 6.375 12 N -0.365 5.365 13 C 0.017 3.983 14 H 0.128 0.872 15 C -0.182 4.182 16 C -0.095 4.095 17 H 0.124 0.876 18 C -0.014 4.014 19 C -0.182 4.182 20 C 0.117 3.883 21 F -0.107 7.107 22 C -0.217 4.217 23 C 0.116 3.884 24 F -0.108 7.108 25 C -0.180 4.180 26 C -0.172 4.172 27 C -0.203 4.203 28 Br 0.061 6.939 29 C -0.043 4.043 30 H 0.224 0.776 31 H 0.138 0.862 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.154 0.846 35 H 0.158 0.842 36 H 0.116 0.884 37 H 0.117 0.883 38 H 0.238 0.762 39 H 0.117 0.883 40 H 0.098 0.902 41 H 0.163 0.837 42 H 0.167 0.833 43 H 0.161 0.839 44 H 0.100 0.900 45 H 0.121 0.879 46 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 2.178 5.208 0.011 5.645 hybrid contribution -0.413 0.970 0.884 1.376 sum 1.765 6.179 0.895 6.488 Atomic orbital electron populations 1.86625 1.17567 1.79903 1.49322 1.24993 0.84056 1.10918 0.98086 0.95076 0.91500 0.74311 0.80400 1.20207 1.02475 0.94300 0.98139 1.20979 0.94861 0.99763 0.92380 1.21158 1.07033 0.92782 1.01039 1.18634 0.93047 0.90688 0.86387 1.86288 1.67981 1.36052 1.28182 1.22545 0.98018 0.94093 0.89513 1.19959 0.78268 0.88508 0.82971 1.90821 1.52942 1.16007 1.77698 1.45457 1.57077 1.13247 1.20758 1.21854 0.96168 0.94962 0.85355 0.87172 1.23602 0.96082 0.97512 1.01024 1.21696 0.93054 1.00138 0.94575 0.87609 1.19294 0.94964 0.91797 0.95302 1.21073 1.00558 0.99785 0.96801 1.17256 0.96603 0.82075 0.92334 1.91568 1.95299 1.46110 1.77711 1.21102 1.03727 0.92577 1.04264 1.17279 0.90965 0.84433 0.95730 1.91564 1.70734 1.56279 1.92185 1.21109 0.97115 1.00950 0.98832 1.23452 0.94495 1.01731 0.97545 1.21164 1.07868 0.93188 0.98063 1.96819 1.94712 1.04750 1.97599 1.20896 0.95165 0.93599 0.94659 0.77595 0.86160 1.17998 1.18450 0.84576 0.84163 0.88448 0.88316 0.76248 0.88275 0.90163 0.83749 0.83302 0.83942 0.89977 0.87926 0.83814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.16 12.83 -35.23 -0.45 -0.61 16 2 C -0.07 0.10 2.80 36.00 0.10 0.20 16 3 Si 0.69 -1.63 29.88 -169.99 -5.08 -6.71 16 4 C -0.15 0.15 5.35 -104.60 -0.56 -0.41 16 5 C -0.06 0.14 8.66 -39.60 -0.34 -0.21 16 6 C -0.20 0.41 9.04 -39.44 -0.36 0.06 16 7 C 0.16 0.12 6.68 -39.20 -0.26 -0.14 16 8 O -0.27 -0.42 9.01 -39.38 -0.35 -0.78 16 9 C 0.04 -0.10 5.22 36.01 0.19 0.09 16 10 C 0.52 -0.22 7.91 -10.98 -0.09 -0.31 16 11 O -0.50 -2.45 16.10 -14.35 -0.23 -2.68 16 12 N -0.71 2.69 5.26 -53.02 -0.28 2.41 16 13 C 0.12 -0.37 4.32 -67.12 -0.29 -0.66 16 14 H 0.11 -0.11 7.46 -51.93 -0.39 -0.49 16 15 C -0.14 0.49 7.26 -25.92 -0.19 0.31 16 16 C -0.08 0.34 3.85 -90.96 -0.35 -0.01 16 17 H 0.11 -0.62 8.09 -51.93 -0.42 -1.05 16 18 C -0.01 0.03 5.29 -104.65 -0.55 -0.52 16 19 C -0.16 0.27 8.58 -39.50 -0.34 -0.07 16 20 C 0.14 0.00 7.30 -39.42 -0.29 -0.28 16 21 F -0.13 -0.18 17.27 2.25 0.04 -0.14 16 22 C -0.20 0.01 10.01 -39.45 -0.39 -0.38 16 23 C 0.14 -0.01 7.30 -39.43 -0.29 -0.30 16 24 F -0.13 -0.16 17.27 2.25 0.04 -0.12 16 25 C -0.16 0.29 9.69 -39.51 -0.38 -0.09 16 26 C -0.13 0.62 7.29 -25.92 -0.19 0.43 16 27 C -0.12 -0.22 6.24 -39.38 -0.25 -0.47 16 28 Br -0.02 -0.08 33.16 -68.01 -2.26 -2.33 16 29 C -0.02 -0.01 9.42 -39.58 -0.37 -0.39 16 30 H 0.38 -0.95 8.70 45.56 0.40 -0.55 16 31 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 32 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 33 H -0.26 0.21 7.01 56.52 0.40 0.61 16 34 H 0.14 -0.58 4.83 -52.49 -0.25 -0.84 16 35 H 0.14 -0.74 6.30 -52.49 -0.33 -1.07 16 36 H 0.10 -0.53 7.65 -51.93 -0.40 -0.93 16 37 H 0.10 -0.55 7.67 -51.93 -0.40 -0.95 16 38 H 0.40 -2.84 8.70 -40.82 -0.36 -3.20 16 39 H 0.10 -0.34 6.33 -51.93 -0.33 -0.67 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.14 -0.44 6.68 -52.48 -0.35 -0.79 16 42 H 0.15 -0.15 8.06 -52.49 -0.42 -0.57 16 43 H 0.14 -0.51 8.05 -52.49 -0.42 -0.94 16 44 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 45 H 0.10 -0.45 7.72 -51.93 -0.40 -0.85 16 46 H 0.14 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 415.63 15.07 6.26 6.26 Total: 0.00 -10.16 415.63 -12.47 -22.62 By element: Atomic # 1 Polarization: -9.80 SS G_CDS: -4.96 Total: -14.75 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -5.20 Total: -3.16 kcal Atomic # 7 Polarization: 2.69 SS G_CDS: -0.28 Total: 2.41 kcal Atomic # 8 Polarization: -3.03 SS G_CDS: -1.04 Total: -4.07 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.08 Total: -0.26 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.08 Total: -6.71 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.26 Total: -2.33 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -10.16 -12.47 -22.62 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.864 kcal (2) G-P(sol) polarization free energy of solvation -10.155 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.019 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.622 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.486 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds