Wall clock time and date at job start Tue Mar 9 2021 13:12:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86308 * 109.47062 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00100 * 2 1 3 5 5 C 1.38240 * 119.94224 * 244.97796 * 4 2 1 6 6 C 1.38184 * 120.07120 * 179.69984 * 5 4 2 7 7 C 1.38681 * 119.95336 * 0.60075 * 6 5 4 8 8 O 1.35914 * 120.05820 * 179.69763 * 7 6 5 9 9 C 1.42906 * 116.99892 * 359.72796 * 8 7 6 10 10 C 1.50706 * 109.46702 * 179.97438 * 9 8 7 11 11 O 1.21279 * 120.00072 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99762 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.84597 * 336.20253 * 13 12 10 15 15 C 1.53783 * 113.61176 * 107.50310 * 13 12 10 16 16 C 1.53780 * 87.08087 * 89.12298 * 15 13 12 17 17 H 1.09004 * 113.61164 * 270.88728 * 16 15 13 18 18 C 1.50696 * 113.69438 * 139.99167 * 16 15 13 19 19 C 1.38206 * 119.97194 * 322.18841 * 18 16 15 20 20 C 1.38477 * 120.02369 * 179.72880 * 19 18 16 21 21 F 1.35097 * 120.01267 * 180.25529 * 20 19 18 22 22 C 1.38423 * 119.97274 * 0.54277 * 20 19 18 23 23 C 1.38417 * 119.94896 * 359.73009 * 22 20 19 24 24 F 1.35102 * 120.01376 * 180.02562 * 23 22 20 25 25 C 1.38209 * 119.97607 * 142.46554 * 18 16 15 26 26 C 1.53772 * 113.61760 * 205.00304 * 13 12 10 27 27 C 1.38827 * 119.87896 * 359.42520 * 7 6 5 28 28 Br 1.89106 * 120.03375 * 180.25546 * 27 7 6 29 29 C 1.38194 * 119.93365 * 0.27594 * 27 7 6 30 30 H 0.96697 * 114.00387 * 299.99880 * 1 2 3 31 31 H 1.09002 * 109.47612 * 240.00529 * 2 1 3 32 32 H 1.48501 * 109.99956 * 300.00242 * 3 2 1 33 33 H 1.48504 * 109.99543 * 61.31998 * 3 2 1 34 34 H 1.07999 * 119.96302 * 0.02562 * 5 4 2 35 35 H 1.08000 * 120.02345 * 180.32422 * 6 5 4 36 36 H 1.09000 * 109.46890 * 59.99977 * 9 8 7 37 37 H 1.09000 * 109.47141 * 299.99620 * 9 8 7 38 38 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 39 39 H 1.09002 * 113.61009 * 203.66947 * 15 13 12 40 40 H 1.08998 * 113.61477 * 334.57012 * 15 13 12 41 41 H 1.08003 * 119.98903 * 359.97438 * 19 18 16 42 42 H 1.08000 * 120.02143 * 179.75096 * 22 20 19 43 43 H 1.07997 * 119.98740 * 0.02562 * 25 18 16 44 44 H 1.09006 * 113.61862 * 25.43396 * 26 13 12 45 45 H 1.09001 * 113.61811 * 156.25393 * 26 13 12 46 46 H 1.07995 * 119.98071 * 180.02562 * 29 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6390 -0.0112 2.1903 6 6 3.0955 -0.6586 3.3225 7 6 2.8541 -2.0139 3.4900 8 8 3.3075 -2.6542 4.5999 9 6 4.0309 -1.8704 5.5509 10 6 4.4501 -2.7430 6.7059 11 8 4.1577 -3.9200 6.7141 12 7 5.1499 -2.2154 7.7298 13 6 5.5570 -3.0634 8.8528 14 1 4.9246 -3.9435 8.9695 15 6 7.0624 -3.3769 8.8740 16 6 7.2372 -2.0969 9.7081 17 1 7.3937 -1.2016 9.1064 18 6 8.2398 -2.2340 10.8248 19 6 8.3239 -3.4161 11.5359 20 6 9.2487 -3.5452 12.5585 21 9 9.3342 -4.7026 13.2501 22 6 10.0813 -2.4859 12.8758 23 6 9.9922 -1.3006 12.1666 24 9 10.8046 -0.2660 12.4749 25 6 9.0706 -1.1756 11.1408 26 6 5.7801 -2.2874 10.1615 27 6 2.1437 -2.7143 2.5246 28 35 1.8057 -4.5610 2.7519 29 6 1.6840 -2.0608 1.3970 30 1 -0.3934 0.4417 0.7650 31 1 1.7924 -0.5137 -0.8900 32 1 1.5614 2.4680 -1.2085 33 1 1.5878 2.4585 1.2243 34 1 2.8307 1.0433 2.0576 35 1 3.6438 -0.1105 4.0744 36 1 3.3945 -1.0647 5.9169 37 1 4.9156 -1.4471 5.0751 38 1 5.3835 -1.2739 7.7234 39 1 7.3107 -4.2890 9.4167 40 1 7.5328 -3.3259 7.8921 41 1 7.6709 -4.2409 11.2913 42 1 10.8000 -2.5844 13.6759 43 1 9.0006 -0.2507 10.5877 44 1 5.2155 -1.3567 10.2191 45 1 5.6767 -2.9012 11.0563 46 1 1.1309 -2.6048 0.6458 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:01 Heat of formation + Delta-G solvation = -96.184318 kcal Electronic energy + Delta-G solvation = -34079.630207 eV Core-core repulsion = 28812.954204 eV Total energy + Delta-G solvation = -5266.676004 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.042 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -50.08007 -50.05059 -41.80562 -41.35382 -40.29605 -39.22305 -38.49402 -37.31068 -34.67213 -33.59054 -32.14220 -31.86275 -31.35091 -30.48875 -29.53022 -26.69197 -26.61506 -26.15399 -24.16840 -23.88475 -23.01232 -22.42378 -21.84422 -20.40896 -19.58134 -18.96830 -18.52352 -18.16730 -18.10010 -17.48437 -17.41226 -17.20234 -17.04595 -16.92467 -16.71857 -16.37369 -16.33892 -16.11932 -15.90543 -15.67346 -15.48190 -15.34695 -15.32340 -14.75371 -14.61408 -14.47697 -14.12706 -13.82540 -13.77667 -13.68878 -13.58498 -13.46754 -13.07528 -12.92518 -12.77449 -12.39532 -12.19969 -12.15820 -12.06829 -11.87419 -11.68719 -11.67870 -11.30280 -11.22399 -10.98855 -10.58944 -10.14165 -9.95251 -9.89585 -9.80779 -9.31508 -4.88128 -0.09927 -0.07979 -0.03733 0.13622 0.65810 1.34538 1.42579 1.47470 1.62641 2.02562 2.25960 2.40695 2.51874 2.78357 3.27333 3.39282 3.42201 3.50112 3.58503 3.62147 3.67566 3.77856 3.77980 3.84688 3.91546 3.93283 4.06009 4.07965 4.13296 4.13736 4.14553 4.34454 4.59066 4.61551 4.66388 4.73874 4.76233 4.79066 4.79716 4.86979 4.87853 4.98025 4.98658 5.01977 5.06115 5.14476 5.25256 5.33117 5.49742 5.59912 5.72377 6.08877 6.48828 6.51759 7.18171 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.085 4.085 3 Si 0.778 3.222 4 C -0.149 4.149 5 C -0.056 4.056 6 C -0.188 4.188 7 C 0.150 3.850 8 O -0.306 6.306 9 C 0.031 3.969 10 C 0.514 3.486 11 O -0.569 6.569 12 N -0.691 5.691 13 C 0.115 3.885 14 H 0.082 0.918 15 C -0.145 4.145 16 C -0.064 4.064 17 H 0.133 0.867 18 C -0.009 4.009 19 C -0.161 4.161 20 C 0.116 3.884 21 F -0.142 7.142 22 C -0.207 4.207 23 C 0.117 3.883 24 F -0.140 7.140 25 C -0.152 4.152 26 C -0.124 4.124 27 C -0.145 4.145 28 Br -0.056 7.056 29 C -0.036 4.036 30 H 0.387 0.613 31 H 0.121 0.879 32 H -0.309 1.309 33 H -0.269 1.269 34 H 0.165 0.835 35 H 0.182 0.818 36 H 0.132 0.868 37 H 0.135 0.865 38 H 0.423 0.577 39 H 0.094 0.906 40 H 0.076 0.924 41 H 0.155 0.845 42 H 0.149 0.851 43 H 0.167 0.833 44 H 0.098 0.902 45 H 0.099 0.901 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.344 9.830 0.403 10.391 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.193 4.193 3 Si 0.683 3.317 4 C -0.151 4.151 5 C -0.074 4.074 6 C -0.207 4.207 7 C 0.102 3.898 8 O -0.218 6.218 9 C -0.046 4.046 10 C 0.300 3.700 11 O -0.446 6.446 12 N -0.345 5.345 13 C 0.010 3.990 14 H 0.100 0.900 15 C -0.183 4.183 16 C -0.082 4.082 17 H 0.151 0.849 18 C -0.010 4.010 19 C -0.180 4.180 20 C 0.096 3.904 21 F -0.121 7.121 22 C -0.226 4.226 23 C 0.098 3.902 24 F -0.118 7.118 25 C -0.171 4.171 26 C -0.162 4.162 27 C -0.225 4.225 28 Br 0.029 6.971 29 C -0.055 4.055 30 H 0.236 0.764 31 H 0.139 0.861 32 H -0.238 1.238 33 H -0.195 1.195 34 H 0.181 0.819 35 H 0.199 0.801 36 H 0.149 0.851 37 H 0.153 0.847 38 H 0.262 0.738 39 H 0.112 0.888 40 H 0.094 0.906 41 H 0.172 0.828 42 H 0.167 0.833 43 H 0.184 0.816 44 H 0.117 0.883 45 H 0.117 0.883 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 2.902 8.582 0.068 9.060 hybrid contribution -0.648 -0.033 0.848 1.068 sum 2.254 8.550 0.916 8.889 Atomic orbital electron populations 1.86595 1.18702 1.80451 1.50198 1.25328 0.83371 1.12457 0.98163 0.94096 0.89844 0.71035 0.76756 1.20279 1.02596 0.93582 0.98644 1.21296 0.93560 1.00881 0.91626 1.21568 1.06036 0.91459 1.01652 1.18797 0.93204 0.91739 0.86066 1.86250 1.68676 1.37966 1.28948 1.22888 0.99813 0.93644 0.88258 1.20526 0.77607 0.87964 0.83862 1.90801 1.55760 1.18883 1.79173 1.45294 1.55599 1.14104 1.19519 1.21819 0.95876 0.94810 0.86532 0.89992 1.23591 0.95594 0.98131 1.01032 1.21745 0.92286 1.00440 0.93734 0.84938 1.19490 0.95009 0.91073 0.95389 1.21284 0.99952 1.00635 0.96080 1.17460 0.97746 0.81854 0.93293 1.91528 1.95508 1.46840 1.78195 1.21184 1.03941 0.92902 1.04583 1.17475 0.91794 0.84188 0.96763 1.91534 1.71227 1.56659 1.92425 1.21382 0.95885 1.01903 0.97884 1.23399 0.94420 1.02037 0.96317 1.21280 1.09817 0.91870 0.99514 1.96765 1.94975 1.07618 1.97715 1.20885 0.95766 0.94479 0.94416 0.76404 0.86091 1.23810 1.19492 0.81851 0.80128 0.85057 0.84709 0.73813 0.88792 0.90558 0.82765 0.83320 0.81570 0.88314 0.88254 0.84700 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.45 12.83 -148.98 -1.91 -2.36 16 2 C -0.09 0.28 2.80 71.24 0.20 0.48 16 3 Si 0.78 -4.92 29.88 68.60 2.05 -2.87 16 4 C -0.15 0.42 5.35 -19.85 -0.11 0.32 16 5 C -0.06 0.41 8.66 22.26 0.19 0.60 16 6 C -0.19 1.37 9.04 22.36 0.20 1.57 16 7 C 0.15 0.09 6.68 22.52 0.15 0.24 16 8 O -0.31 -0.83 9.01 -73.54 -0.66 -1.49 16 9 C 0.03 -0.25 5.22 71.24 0.37 0.13 16 10 C 0.51 -0.74 7.91 87.66 0.69 -0.05 16 11 O -0.57 -6.51 16.10 16.01 0.26 -6.25 16 12 N -0.69 6.42 5.26 -440.05 -2.32 4.10 16 13 C 0.12 -0.77 4.32 45.52 0.20 -0.57 16 14 H 0.08 -0.03 7.46 -2.39 -0.02 -0.04 16 15 C -0.14 1.11 7.26 31.12 0.23 1.33 16 16 C -0.06 0.72 3.85 -11.01 -0.04 0.68 16 17 H 0.13 -2.14 8.09 -2.38 -0.02 -2.15 16 18 C -0.01 0.06 5.29 -19.88 -0.11 -0.04 16 19 C -0.16 0.55 8.58 22.32 0.19 0.74 16 20 C 0.12 0.11 7.30 22.37 0.16 0.27 16 21 F -0.14 -0.61 17.27 44.97 0.78 0.16 16 22 C -0.21 -0.16 10.01 22.36 0.22 0.07 16 23 C 0.12 -0.04 7.30 22.37 0.16 0.13 16 24 F -0.14 -0.35 17.27 44.97 0.78 0.43 16 25 C -0.15 0.81 9.69 22.32 0.22 1.02 16 26 C -0.12 1.36 7.29 31.12 0.23 1.59 16 27 C -0.14 -0.66 6.24 22.40 0.14 -0.52 16 28 Br -0.06 -0.49 33.16 -20.37 -0.68 -1.17 16 29 C -0.04 -0.07 9.42 22.27 0.21 0.14 16 30 H 0.39 -2.01 8.70 -74.06 -0.64 -2.65 16 31 H 0.12 -0.48 7.96 -2.39 -0.02 -0.50 16 32 H -0.31 -0.90 7.11 99.48 0.71 -0.19 16 33 H -0.27 1.23 7.01 99.48 0.70 1.93 16 34 H 0.16 -2.10 4.83 -2.91 -0.01 -2.11 16 35 H 0.18 -2.89 6.30 -2.91 -0.02 -2.91 16 36 H 0.13 -1.96 7.65 -2.39 -0.02 -1.97 16 37 H 0.14 -2.07 7.67 -2.39 -0.02 -2.09 16 38 H 0.42 -7.48 8.70 -92.71 -0.81 -8.29 16 39 H 0.09 -0.62 6.33 -2.39 -0.02 -0.63 16 40 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 41 H 0.15 -0.92 6.68 -2.91 -0.02 -0.94 16 42 H 0.15 -0.06 8.06 -2.91 -0.02 -0.08 16 43 H 0.17 -1.72 8.05 -2.91 -0.02 -1.75 16 44 H 0.10 -1.35 8.14 -2.38 -0.02 -1.37 16 45 H 0.10 -0.97 7.72 -2.39 -0.02 -0.99 16 46 H 0.14 0.34 8.06 -2.91 -0.02 0.31 16 Total: 0.00 -29.71 415.63 1.47 -28.24 By element: Atomic # 1 Polarization: -26.60 SS G_CDS: -0.33 Total: -26.93 kcal Atomic # 6 Polarization: 4.62 SS G_CDS: 3.51 Total: 8.14 kcal Atomic # 7 Polarization: 6.42 SS G_CDS: -2.32 Total: 4.10 kcal Atomic # 8 Polarization: -7.79 SS G_CDS: -2.32 Total: -10.10 kcal Atomic # 9 Polarization: -0.96 SS G_CDS: 1.55 Total: 0.59 kcal Atomic # 14 Polarization: -4.92 SS G_CDS: 2.05 Total: -2.87 kcal Atomic # 35 Polarization: -0.49 SS G_CDS: -0.68 Total: -1.17 kcal Total: -29.71 1.47 -28.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.943 kcal (2) G-P(sol) polarization free energy of solvation -29.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.658 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.241 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds