Wall clock time and date at job start Tue Mar 9 2021 13:12:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38215 * 120.00322 * 2 1 4 4 C 1.50705 * 119.99580 * 359.97438 * 3 2 1 5 5 H 1.08994 * 112.90847 * 348.47908 * 4 3 2 6 6 C 1.53777 * 113.61003 * 119.72807 * 4 3 2 7 7 C 1.53784 * 87.08172 * 139.98274 * 6 4 3 8 8 H 1.09002 * 113.61454 * 219.93721 * 7 6 4 9 9 N 1.46499 * 113.61491 * 89.11442 * 7 6 4 10 10 C 1.34777 * 119.99665 * 155.28109 * 9 7 6 11 11 O 1.21693 * 120.00200 * 359.72115 * 10 9 7 12 12 C 1.46680 * 119.99703 * 179.72441 * 10 9 7 13 13 C 1.37866 * 126.23126 * 179.71115 * 12 10 9 14 14 C 1.39839 * 107.08428 * 179.84713 * 13 12 10 15 15 C 1.50700 * 126.06748 * 180.14062 * 14 13 12 16 16 O 1.42902 * 109.46931 * 300.29977 * 15 14 13 17 17 Si 1.86303 * 109.46917 * 180.30543 * 15 14 13 18 18 C 1.35452 * 107.86271 * 0.41692 * 14 13 12 19 19 N 1.35525 * 108.87395 * 359.74497 * 18 14 13 20 20 C 1.53777 * 113.61330 * 217.22302 * 4 3 2 21 21 C 1.38252 * 120.00387 * 179.72893 * 3 2 1 22 22 C 1.38220 * 119.99737 * 0.24790 * 21 3 2 23 23 C 1.38259 * 120.00190 * 0.02562 * 22 21 3 24 24 C 1.38213 * 119.99510 * 359.97438 * 23 22 21 25 25 H 1.08996 * 109.47088 * 89.99992 * 1 2 3 26 26 H 1.09003 * 109.47062 * 210.00157 * 1 2 3 27 27 H 1.08997 * 109.46897 * 330.00336 * 1 2 3 28 28 H 1.08999 * 113.61756 * 25.43784 * 6 4 3 29 29 H 1.08999 * 113.69433 * 254.54109 * 6 4 3 30 30 H 0.97001 * 119.99790 * 334.99822 * 9 7 6 31 31 H 1.07997 * 126.45946 * 359.96364 * 13 12 10 32 32 H 1.08998 * 109.47432 * 60.30168 * 15 14 13 33 33 H 0.96698 * 114.00751 * 300.00563 * 16 15 14 34 34 H 1.48500 * 110.00040 * 58.68208 * 17 15 14 35 35 H 1.48506 * 109.99756 * 179.97438 * 17 15 14 36 36 H 1.08005 * 125.56033 * 179.77159 * 18 14 13 37 37 H 0.96998 * 125.68287 * 180.02562 * 19 18 14 38 38 H 1.08999 * 113.61239 * 105.47267 * 20 4 3 39 39 H 1.08999 * 113.61926 * 334.57500 * 20 4 3 40 40 H 1.07998 * 120.00275 * 180.27490 * 21 3 2 41 41 H 1.07995 * 119.99517 * 180.02562 * 22 21 3 42 42 H 1.07998 * 119.99669 * 180.02562 * 23 22 21 43 43 H 1.08001 * 119.99074 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4446 2.5021 -0.0006 5 1 0.3806 2.3776 -0.2015 6 6 1.7413 3.3851 1.2229 7 6 1.7280 4.5853 0.2615 8 1 2.5009 5.3238 0.4744 9 7 0.4020 5.1834 0.0878 10 6 0.2884 6.4733 -0.2861 11 8 1.2872 7.1425 -0.4745 12 6 -1.0392 7.0705 -0.4659 13 6 -1.3040 8.3713 -0.8380 14 6 -2.6946 8.5085 -0.8911 15 6 -3.4493 9.7604 -1.2574 16 8 -3.1107 10.8053 -0.3433 17 14 -5.2807 9.4292 -1.1709 18 6 -3.2429 7.3181 -0.5490 19 7 -2.2478 6.4358 -0.2881 20 6 2.1086 3.5963 -0.8529 21 6 3.5806 1.1970 0.0057 22 6 4.2717 -0.0001 0.0061 23 6 3.5804 -1.1974 0.0004 24 6 2.1983 -1.1973 -0.0052 25 1 -0.3633 0.0000 -1.0276 26 1 -0.3633 -0.8900 0.5139 27 1 -0.3633 0.8900 0.5138 28 1 2.7164 3.1960 1.6718 29 1 0.9345 3.4037 1.9557 30 1 -0.3941 4.6500 0.2379 31 1 -0.5749 9.1391 -1.0504 32 1 -3.1821 10.0626 -2.2700 33 1 -3.3211 10.6048 0.5789 34 1 -5.6526 8.9856 0.1966 35 1 -6.0362 10.6564 -1.5294 36 1 -4.3006 7.1064 -0.4935 37 1 -2.3671 5.5110 -0.0211 38 1 1.5975 3.7846 -1.7970 39 1 3.1841 3.4649 -0.9717 40 1 4.1206 2.1322 0.0102 41 1 5.3517 0.0000 0.0110 42 1 4.1205 -2.1327 0.0012 43 1 1.6584 -2.1327 -0.0093 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_10543058.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:44 Heat of formation + Delta-G solvation = 29.990151 kcal Electronic energy + Delta-G solvation = -24892.830893 eV Core-core repulsion = 21291.834601 eV Total energy + Delta-G solvation = -3600.996293 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.51402 -41.51657 -40.18026 -38.72969 -37.79770 -34.80649 -33.73297 -32.56586 -31.68549 -30.59876 -27.87934 -26.81153 -26.74156 -25.97802 -24.31587 -22.92026 -21.88703 -21.29805 -20.82782 -20.27223 -19.84087 -17.83803 -17.58529 -17.11085 -16.84125 -16.50033 -16.45089 -16.02245 -15.83131 -15.66250 -15.08254 -15.03995 -14.85372 -14.58499 -14.47931 -14.36698 -13.97385 -13.84563 -13.59224 -13.45722 -13.45038 -13.14398 -12.83388 -12.73918 -12.44581 -12.07691 -11.81966 -11.75363 -11.57464 -11.34282 -11.20188 -10.51364 -10.28195 -9.94031 -9.68326 -9.42743 -9.29122 -4.83702 0.34679 0.42552 0.47777 1.38449 1.58009 1.69572 1.88199 2.09900 2.13534 2.23311 2.78985 3.42494 3.54997 3.65086 3.68487 3.79113 3.90669 3.98881 4.01674 4.06131 4.18131 4.18910 4.23583 4.37058 4.43245 4.57146 4.60192 4.73028 4.73297 4.79018 4.80739 4.83925 4.90496 4.92466 4.98588 4.98919 5.03310 5.10202 5.18863 5.32561 5.44967 5.58564 5.62739 5.63780 5.73262 5.76821 6.13965 6.33969 6.51431 6.63459 7.03940 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.094 4.094 3 C -0.081 4.081 4 C -0.065 4.065 5 H 0.117 0.883 6 C -0.123 4.123 7 C 0.116 3.884 8 H 0.085 0.915 9 N -0.695 5.695 10 C 0.591 3.409 11 O -0.575 6.575 12 C -0.069 4.069 13 C -0.104 4.104 14 C -0.225 4.225 15 C -0.062 4.062 16 O -0.558 6.558 17 Si 0.791 3.209 18 C 0.063 3.937 19 N -0.514 5.514 20 C -0.143 4.143 21 C -0.124 4.124 22 C -0.138 4.138 23 C -0.133 4.133 24 C -0.134 4.134 25 H 0.075 0.925 26 H 0.070 0.930 27 H 0.081 0.919 28 H 0.098 0.902 29 H 0.090 0.910 30 H 0.412 0.588 31 H 0.122 0.878 32 H 0.108 0.892 33 H 0.384 0.616 34 H -0.269 1.269 35 H -0.315 1.315 36 H 0.216 0.784 37 H 0.437 0.563 38 H 0.067 0.933 39 H 0.094 0.906 40 H 0.130 0.870 41 H 0.130 0.870 42 H 0.131 0.869 43 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.373 -7.924 1.083 10.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.094 4.094 3 C -0.081 4.081 4 C -0.083 4.083 5 H 0.135 0.865 6 C -0.161 4.161 7 C 0.010 3.990 8 H 0.103 0.897 9 N -0.346 5.346 10 C 0.380 3.620 11 O -0.455 6.455 12 C -0.182 4.182 13 C -0.131 4.131 14 C -0.231 4.231 15 C -0.170 4.170 16 O -0.366 6.366 17 Si 0.695 3.305 18 C -0.076 4.076 19 N -0.112 5.112 20 C -0.181 4.181 21 C -0.142 4.142 22 C -0.156 4.156 23 C -0.151 4.151 24 C -0.152 4.152 25 H 0.094 0.906 26 H 0.089 0.911 27 H 0.100 0.900 28 H 0.116 0.884 29 H 0.109 0.891 30 H 0.249 0.751 31 H 0.140 0.860 32 H 0.126 0.874 33 H 0.233 0.767 34 H -0.195 1.195 35 H -0.244 1.244 36 H 0.233 0.767 37 H 0.279 0.721 38 H 0.086 0.914 39 H 0.112 0.888 40 H 0.148 0.852 41 H 0.148 0.852 42 H 0.149 0.851 43 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -6.149 -7.172 0.852 9.486 hybrid contribution 0.825 0.095 0.995 1.296 sum -5.324 -7.077 1.847 9.047 Atomic orbital electron populations 1.20898 0.89795 1.03729 1.02961 1.20106 0.97311 0.92536 0.99439 1.19705 0.93518 0.94420 1.00489 1.21635 1.00138 0.89740 0.96815 0.86537 1.23359 1.04212 0.92413 0.96147 1.21864 0.84935 0.94568 0.97590 0.89666 1.45342 1.09284 1.10574 1.69449 1.17265 0.87065 0.81761 0.75942 1.90853 1.38717 1.62761 1.53129 1.20060 0.85240 0.94638 1.18279 1.21217 0.96267 0.94302 1.01326 1.19887 0.93367 0.96982 1.12914 1.24780 1.11337 0.85487 0.95375 1.86567 1.85785 1.42734 1.21508 0.94327 0.69973 0.83337 0.82866 1.22379 0.95191 0.88526 1.01469 1.41844 1.03979 1.13504 1.51830 1.23549 1.01987 0.94832 0.97765 1.21213 0.94141 0.98520 1.00351 1.21382 1.00709 0.92751 1.00772 1.21408 0.94782 0.98740 1.00174 1.21317 0.94558 0.98310 1.01031 0.90614 0.91068 0.89976 0.88406 0.89141 0.75101 0.85955 0.87399 0.76686 1.19459 1.24381 0.76735 0.72102 0.91378 0.88781 0.85218 0.85177 0.85119 0.85068 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.67 9.32 71.24 0.66 1.33 16 2 C -0.09 0.04 5.88 -19.87 -0.12 -0.08 16 3 C -0.08 0.05 5.29 -19.86 -0.11 -0.06 16 4 C -0.07 0.32 3.40 -11.01 -0.04 0.28 16 5 H 0.12 -0.99 6.09 -2.39 -0.01 -1.00 16 6 C -0.12 0.65 7.29 31.12 0.23 0.88 16 7 C 0.12 -0.15 4.32 45.52 0.20 0.04 16 8 H 0.09 0.33 7.47 -2.39 -0.02 0.32 16 9 N -0.70 1.95 5.26 -443.99 -2.33 -0.38 16 10 C 0.59 3.22 7.79 86.45 0.67 3.89 16 11 O -0.58 -9.00 16.48 -4.33 -0.07 -9.07 16 12 C -0.07 -0.14 7.06 40.35 0.28 0.14 16 13 C -0.10 -0.62 10.59 22.57 0.24 -0.38 16 14 C -0.23 0.02 5.44 -20.12 -0.11 -0.09 16 15 C -0.06 -0.01 3.02 71.24 0.22 0.20 16 16 O -0.56 -2.79 12.88 -148.98 -1.92 -4.71 16 17 Si 0.79 -3.77 30.59 68.60 2.10 -1.67 16 18 C 0.06 -0.45 10.45 83.48 0.87 0.42 16 19 N -0.51 3.88 5.99 -183.62 -1.10 2.78 16 20 C -0.14 0.28 7.25 31.12 0.23 0.50 16 21 C -0.12 -0.09 8.61 22.27 0.19 0.10 16 22 C -0.14 -0.20 10.05 22.27 0.22 0.02 16 23 C -0.13 -0.19 10.05 22.27 0.22 0.04 16 24 C -0.13 -0.11 9.70 22.27 0.22 0.11 16 25 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 26 H 0.07 -0.44 8.09 -2.39 -0.02 -0.46 16 27 H 0.08 -0.72 6.34 -2.39 -0.02 -0.74 16 28 H 0.10 -0.42 7.72 -2.39 -0.02 -0.44 16 29 H 0.09 -0.71 8.14 -2.39 -0.02 -0.72 16 30 H 0.41 -4.31 7.83 -92.71 -0.73 -5.04 16 31 H 0.12 1.31 8.06 -2.91 -0.02 1.29 16 32 H 0.11 0.08 7.96 -2.39 -0.02 0.06 16 33 H 0.38 -0.50 8.70 -74.06 -0.64 -1.15 16 34 H -0.27 0.85 7.11 99.48 0.71 1.56 16 35 H -0.32 -1.53 7.11 99.48 0.71 -0.82 16 36 H 0.22 -3.30 6.19 -2.91 -0.02 -3.32 16 37 H 0.44 -6.83 8.19 -92.71 -0.76 -7.59 16 38 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 39 H 0.09 -0.12 6.31 -2.39 -0.02 -0.14 16 40 H 0.13 -0.22 6.66 -2.91 -0.02 -0.24 16 41 H 0.13 -0.18 8.06 -2.91 -0.02 -0.20 16 42 H 0.13 -0.21 8.06 -2.91 -0.02 -0.24 16 43 H 0.13 -0.29 8.06 -2.91 -0.02 -0.32 16 Total: 0.00 -25.17 355.12 -0.27 -25.43 By element: Atomic # 1 Polarization: -18.70 SS G_CDS: -1.02 Total: -19.73 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: 4.08 Total: 7.35 kcal Atomic # 7 Polarization: 5.83 SS G_CDS: -3.44 Total: 2.40 kcal Atomic # 8 Polarization: -11.79 SS G_CDS: -1.99 Total: -13.78 kcal Atomic # 14 Polarization: -3.77 SS G_CDS: 2.10 Total: -1.67 kcal Total: -25.17 -0.27 -25.43 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_10543058.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.424 kcal (2) G-P(sol) polarization free energy of solvation -25.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.434 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds