Wall clock time and date at job start Tue Mar 9 2021 13:12:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38209 * 120.00362 * 2 1 4 4 C 1.50696 * 119.99925 * 0.02562 * 3 2 1 5 5 H 1.08997 * 112.84964 * 348.80073 * 4 3 2 6 6 C 1.53787 * 113.61589 * 119.99609 * 4 3 2 7 7 C 1.53777 * 87.08105 * 140.06588 * 6 4 3 8 8 H 1.09005 * 113.61848 * 219.93698 * 7 6 4 9 9 N 1.46497 * 113.61592 * 89.11779 * 7 6 4 10 10 C 1.34781 * 120.00088 * 155.00210 * 9 7 6 11 11 O 1.21694 * 119.99946 * 5.13453 * 10 9 7 12 12 C 1.46677 * 120.00107 * 185.13828 * 10 9 7 13 13 C 1.37876 * 126.23257 * 5.00231 * 12 10 9 14 14 C 1.39829 * 107.08536 * 180.02562 * 13 12 10 15 15 C 1.50703 * 126.06821 * 180.02562 * 14 13 12 16 16 O 1.42905 * 109.46854 * 65.00337 * 15 14 13 17 17 Si 1.86300 * 109.46994 * 184.99844 * 15 14 13 18 18 C 1.35454 * 107.86353 * 359.75844 * 14 13 12 19 19 N 1.35532 * 108.87244 * 0.39450 * 18 14 13 20 20 C 1.46499 * 125.67592 * 179.86501 * 19 18 14 21 21 C 1.53785 * 113.69117 * 217.53297 * 4 3 2 22 22 C 1.38257 * 119.99863 * 180.27432 * 3 2 1 23 23 C 1.38210 * 120.00280 * 359.49643 * 22 3 2 24 24 C 1.38258 * 119.99607 * 0.50382 * 23 22 3 25 25 C 1.38216 * 120.00081 * 359.75129 * 24 23 22 26 26 H 1.09003 * 109.47289 * 89.99432 * 1 2 3 27 27 H 1.08998 * 109.47502 * 210.00109 * 1 2 3 28 28 H 1.09007 * 109.46835 * 330.00134 * 1 2 3 29 29 H 1.09003 * 113.60981 * 25.51661 * 6 4 3 30 30 H 1.09000 * 113.61632 * 254.61509 * 6 4 3 31 31 H 0.96998 * 120.00006 * 335.00111 * 9 7 6 32 32 H 1.08004 * 126.45363 * 0.03294 * 13 12 10 33 33 H 1.08999 * 109.47277 * 305.00398 * 15 14 13 34 34 H 0.96694 * 114.00212 * 59.99339 * 16 15 14 35 35 H 1.48508 * 109.99531 * 180.02562 * 17 15 14 36 36 H 1.48494 * 110.00542 * 301.32029 * 17 15 14 37 37 H 1.08004 * 125.56056 * 180.24010 * 18 14 13 38 38 H 1.08997 * 109.47260 * 264.22161 * 20 19 18 39 39 H 1.08996 * 109.47302 * 24.22447 * 20 19 18 40 40 H 1.09000 * 109.46864 * 144.22251 * 20 19 18 41 41 H 1.08997 * 113.61036 * 105.45952 * 21 4 3 42 42 H 1.09003 * 113.61330 * 334.55658 * 21 4 3 43 43 H 1.08002 * 120.00185 * 179.72838 * 22 3 2 44 44 H 1.07999 * 120.00444 * 180.23235 * 23 22 3 45 45 H 1.08009 * 119.99900 * 179.72346 * 24 23 22 46 46 H 1.08004 * 119.99562 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4447 2.5020 0.0006 5 1 0.3797 2.3760 -0.1941 6 6 1.7472 3.3875 1.2210 7 6 1.7272 4.5860 0.2577 8 1 2.5005 5.3258 0.4649 9 7 0.3996 5.1823 0.0905 10 6 0.2824 6.4731 -0.2795 11 8 1.2749 7.1167 -0.5652 12 6 -1.0414 7.1020 -0.3378 13 6 -2.2341 6.5279 0.0483 14 6 -3.2378 7.4749 -0.1773 15 6 -4.7083 7.2918 0.0973 16 8 -4.9152 7.1420 1.5034 17 14 -5.6442 8.7827 -0.5126 18 6 -2.6532 8.5882 -0.6808 19 7 -1.3194 8.3725 -0.7883 20 6 -0.3365 9.3340 -1.2940 21 6 2.1026 3.5956 -0.8574 22 6 3.5807 1.1968 -0.0057 23 6 4.2717 -0.0002 -0.0009 24 6 3.5803 -1.1975 -0.0009 25 6 2.1982 -1.1974 -0.0005 26 1 -0.3634 0.0001 -1.0277 27 1 -0.3634 -0.8899 0.5138 28 1 -0.3633 0.8901 0.5139 29 1 2.7251 3.2001 1.6646 30 1 0.9437 3.4056 1.9573 31 1 -0.3951 4.6483 0.2460 32 1 -2.3677 5.5341 0.4494 33 1 -5.0664 6.4015 -0.4195 34 1 -4.6190 7.8987 2.0274 35 1 -7.0957 8.6148 -0.2470 36 1 -5.1435 10.0076 0.1614 37 1 -3.1665 9.4982 -0.9546 38 1 -0.1519 9.1429 -2.3510 39 1 -0.7211 10.3462 -1.1695 40 1 0.5947 9.2281 -0.7375 41 1 1.5858 3.7818 -1.7988 42 1 3.1776 3.4652 -0.9819 43 1 4.1208 2.1320 -0.0102 44 1 5.3517 -0.0003 -0.0016 45 1 4.1203 -2.1329 -0.0017 46 1 1.6582 -2.1327 -0.0010 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_10803934.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:47 Heat of formation + Delta-G solvation = 38.584898 kcal Electronic energy + Delta-G solvation = -27158.407333 eV Core-core repulsion = 23402.246118 eV Total energy + Delta-G solvation = -3756.161215 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.58190 -41.50938 -40.14001 -38.69741 -37.79401 -34.93317 -33.85077 -33.63340 -31.83885 -30.61453 -28.34820 -27.83653 -26.71745 -26.27472 -25.63409 -24.12356 -22.86440 -21.86610 -21.29032 -20.61434 -19.97592 -18.87804 -17.99163 -17.54180 -16.97938 -16.83594 -16.67275 -16.46115 -16.00620 -15.79929 -15.60665 -15.44567 -15.12516 -14.91664 -14.79928 -14.52698 -14.37457 -14.01635 -13.96232 -13.59703 -13.47204 -13.43067 -13.25709 -13.14999 -13.13647 -12.82006 -12.71124 -12.42597 -12.06083 -11.78080 -11.72594 -11.53190 -11.21305 -11.17162 -10.44351 -10.20940 -9.71222 -9.67241 -9.41739 -9.27771 -4.84517 0.38187 0.43836 0.48791 1.40155 1.54989 1.56714 1.67934 2.04934 2.25220 2.28510 2.80254 3.45067 3.56108 3.65130 3.68991 3.73901 3.83400 3.92843 4.02350 4.02920 4.07074 4.20216 4.23168 4.25542 4.35977 4.39513 4.43914 4.58664 4.60929 4.71050 4.73963 4.74716 4.79855 4.81292 4.81871 4.84583 4.94437 4.99897 5.01012 5.13723 5.18880 5.20331 5.33111 5.48540 5.63092 5.64421 5.68130 5.78541 5.87966 6.14835 6.15646 6.43525 6.62246 7.08922 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.095 4.095 3 C -0.081 4.081 4 C -0.068 4.068 5 H 0.111 0.889 6 C -0.125 4.125 7 C 0.121 3.879 8 H 0.089 0.911 9 N -0.689 5.689 10 C 0.589 3.411 11 O -0.582 6.582 12 C -0.079 4.079 13 C -0.109 4.109 14 C -0.215 4.215 15 C -0.045 4.045 16 O -0.552 6.552 17 Si 0.766 3.234 18 C 0.035 3.965 19 N -0.412 5.412 20 C 0.064 3.936 21 C -0.140 4.140 22 C -0.123 4.123 23 C -0.137 4.137 24 C -0.133 4.133 25 C -0.134 4.134 26 H 0.074 0.926 27 H 0.070 0.930 28 H 0.079 0.921 29 H 0.100 0.900 30 H 0.087 0.913 31 H 0.415 0.585 32 H 0.158 0.842 33 H 0.120 0.880 34 H 0.383 0.617 35 H -0.309 1.309 36 H -0.279 1.279 37 H 0.198 0.802 38 H 0.083 0.917 39 H 0.113 0.887 40 H 0.081 0.919 41 H 0.066 0.934 42 H 0.096 0.904 43 H 0.132 0.868 44 H 0.132 0.868 45 H 0.132 0.868 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.540 0.131 -1.680 2.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.095 4.095 3 C -0.081 4.081 4 C -0.087 4.087 5 H 0.129 0.871 6 C -0.163 4.163 7 C 0.016 3.984 8 H 0.107 0.893 9 N -0.340 5.340 10 C 0.379 3.621 11 O -0.464 6.464 12 C -0.192 4.192 13 C -0.136 4.136 14 C -0.222 4.222 15 C -0.154 4.154 16 O -0.360 6.360 17 Si 0.671 3.329 18 C -0.102 4.102 19 N -0.084 5.084 20 C -0.077 4.077 21 C -0.179 4.179 22 C -0.141 4.141 23 C -0.155 4.155 24 C -0.151 4.151 25 C -0.152 4.152 26 H 0.093 0.907 27 H 0.089 0.911 28 H 0.097 0.903 29 H 0.119 0.881 30 H 0.105 0.895 31 H 0.252 0.748 32 H 0.176 0.824 33 H 0.138 0.862 34 H 0.232 0.768 35 H -0.237 1.237 36 H -0.206 1.206 37 H 0.215 0.785 38 H 0.102 0.898 39 H 0.132 0.868 40 H 0.100 0.900 41 H 0.084 0.916 42 H 0.115 0.885 43 H 0.150 0.850 44 H 0.150 0.850 45 H 0.150 0.850 46 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.270 0.917 -1.979 2.524 hybrid contribution 0.291 -0.347 1.194 1.277 sum -0.979 0.570 -0.785 1.379 Atomic orbital electron populations 1.20896 0.90077 1.03617 1.02881 1.20089 0.97138 0.92691 0.99569 1.19706 0.93624 0.94317 1.00434 1.21635 1.00023 0.89941 0.97052 0.87065 1.23374 1.04130 0.92599 0.96154 1.21836 0.84636 0.94525 0.97408 0.89317 1.45210 1.09414 1.10254 1.69129 1.17187 0.86779 0.82098 0.76068 1.90785 1.40083 1.64093 1.51396 1.20034 0.94478 0.88817 1.15822 1.21429 0.89748 1.00389 1.02018 1.19821 0.96405 0.95294 1.10642 1.24491 0.94113 1.12615 0.84217 1.86558 1.85441 1.46281 1.17688 0.94329 0.75100 0.73596 0.89831 1.22340 0.82228 1.01261 1.04406 1.44024 1.07663 1.11291 1.45440 1.22395 0.92025 0.92250 1.01006 1.23535 1.01967 0.94722 0.97668 1.21210 0.93961 0.98619 1.00308 1.21387 1.00744 0.92672 1.00689 1.21410 0.94670 0.98823 1.00189 1.21307 0.94637 0.98194 1.01070 0.90717 0.91066 0.90259 0.88115 0.89484 0.74770 0.82450 0.86211 0.76767 1.23693 1.20555 0.78513 0.89833 0.86837 0.89997 0.91550 0.88519 0.85006 0.84987 0.85035 0.85139 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.32 9.33 71.24 0.66 0.98 16 2 C -0.09 -0.15 5.88 -19.87 -0.12 -0.27 16 3 C -0.08 -0.09 5.29 -19.87 -0.11 -0.19 16 4 C -0.07 0.18 3.41 -11.01 -0.04 0.14 16 5 H 0.11 -0.52 6.07 -2.39 -0.01 -0.53 16 6 C -0.12 0.42 7.29 31.12 0.23 0.65 16 7 C 0.12 -0.03 4.29 45.52 0.20 0.17 16 8 H 0.09 0.32 7.53 -2.38 -0.02 0.30 16 9 N -0.69 0.09 5.24 -443.99 -2.33 -2.24 16 10 C 0.59 3.43 7.77 86.45 0.67 4.10 16 11 O -0.58 -7.16 14.41 -4.33 -0.06 -7.23 16 12 C -0.08 -0.28 6.89 40.35 0.28 0.00 16 13 C -0.11 -0.07 10.28 22.57 0.23 0.17 16 14 C -0.22 0.15 5.43 -20.12 -0.11 0.04 16 15 C -0.04 0.08 3.02 71.24 0.22 0.29 16 16 O -0.55 -1.05 12.88 -148.98 -1.92 -2.97 16 17 Si 0.77 -2.71 30.60 68.60 2.10 -0.61 16 18 C 0.03 -0.07 9.92 83.48 0.83 0.76 16 19 N -0.41 -0.62 3.16 -534.32 -1.69 -2.31 16 20 C 0.06 -0.09 10.49 127.77 1.34 1.25 16 21 C -0.14 0.10 7.26 31.12 0.23 0.33 16 22 C -0.12 -0.18 8.63 22.27 0.19 0.01 16 23 C -0.14 -0.28 10.05 22.27 0.22 -0.05 16 24 C -0.13 -0.30 10.05 22.27 0.22 -0.08 16 25 C -0.13 -0.30 9.70 22.27 0.22 -0.09 16 26 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 27 H 0.07 -0.25 8.09 -2.39 -0.02 -0.26 16 28 H 0.08 -0.39 6.34 -2.38 -0.02 -0.40 16 29 H 0.10 -0.33 7.73 -2.39 -0.02 -0.35 16 30 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 31 H 0.41 -2.05 7.65 -92.71 -0.71 -2.76 16 32 H 0.16 -0.49 7.49 -2.91 -0.02 -0.51 16 33 H 0.12 -0.36 7.96 -2.39 -0.02 -0.38 16 34 H 0.38 -1.24 8.70 -74.06 -0.64 -1.88 16 35 H -0.31 -1.56 7.11 99.48 0.71 -0.85 16 36 H -0.28 0.13 7.11 99.48 0.71 0.83 16 37 H 0.20 -1.58 6.21 -2.91 -0.02 -1.60 16 38 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 39 H 0.11 -0.85 8.12 -2.39 -0.02 -0.87 16 40 H 0.08 0.26 6.54 -2.39 -0.02 0.25 16 41 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 42 H 0.10 -0.10 6.31 -2.39 -0.02 -0.11 16 43 H 0.13 -0.18 6.65 -2.91 -0.02 -0.20 16 44 H 0.13 -0.16 8.06 -2.91 -0.02 -0.18 16 45 H 0.13 -0.12 8.06 -2.91 -0.02 -0.15 16 46 H 0.13 -0.09 8.06 -2.91 -0.02 -0.12 16 Total: 0.00 -18.96 373.59 1.17 -17.79 By element: Atomic # 1 Polarization: -10.34 SS G_CDS: -0.30 Total: -10.64 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: 5.37 Total: 8.20 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -4.01 Total: -4.54 kcal Atomic # 8 Polarization: -8.21 SS G_CDS: -1.98 Total: -10.19 kcal Atomic # 14 Polarization: -2.71 SS G_CDS: 2.10 Total: -0.61 kcal Total: -18.96 1.17 -17.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_10803934.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.377 kcal (2) G-P(sol) polarization free energy of solvation -18.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.416 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.168 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.792 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds