Wall clock time and date at job start Tue Mar 9 2021 13:12:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50711 * 1 3 3 C 1.38209 * 119.99926 * 2 1 4 4 C 1.50692 * 120.00361 * 359.97438 * 3 2 1 5 5 H 1.09004 * 112.90785 * 10.97434 * 4 3 2 6 6 C 1.53784 * 113.61665 * 142.22827 * 4 3 2 7 7 C 1.53778 * 87.08081 * 139.98095 * 6 4 3 8 8 H 1.08999 * 113.61526 * 220.02035 * 7 6 4 9 9 N 1.46500 * 113.69512 * 89.12825 * 7 6 4 10 10 C 1.34773 * 120.00071 * 107.46146 * 9 7 6 11 11 O 1.21724 * 120.00339 * 0.02562 * 10 9 7 12 12 C 1.46571 * 119.99927 * 180.02562 * 10 9 7 13 13 C 1.40852 * 126.57797 * 180.02562 * 12 10 9 14 14 C 1.40093 * 132.86833 * 359.97438 * 13 12 10 15 15 C 1.36445 * 119.25387 * 179.97438 * 14 13 12 16 16 C 1.50707 * 120.29580 * 179.97438 * 15 14 13 17 17 O 1.42896 * 109.47084 * 119.99349 * 16 15 14 18 18 Si 1.86291 * 109.47242 * 239.99842 * 16 15 14 19 19 C 1.40158 * 119.41328 * 359.97438 * 15 14 13 20 20 C 1.35179 * 120.31530 * 359.97438 * 19 15 14 21 21 N 1.36243 * 120.71200 * 0.04431 * 20 19 15 22 22 N 1.40013 * 132.01665 * 180.02562 * 21 20 19 23 23 C 1.30743 * 109.60414 * 179.68706 * 22 21 20 24 24 C 1.53778 * 87.08449 * 334.56700 * 7 6 4 25 25 C 1.38262 * 119.99313 * 179.72123 * 3 2 1 26 26 C 1.38205 * 120.00185 * 0.27778 * 25 3 2 27 27 C 1.38255 * 120.00219 * 359.97438 * 26 25 3 28 28 C 1.38214 * 119.99901 * 359.95446 * 27 26 25 29 29 H 1.08995 * 109.46637 * 89.99808 * 1 2 3 30 30 H 1.08995 * 109.47302 * 210.00298 * 1 2 3 31 31 H 1.09003 * 109.46699 * 330.00441 * 1 2 3 32 32 H 1.08993 * 113.61313 * 254.52692 * 6 4 3 33 33 H 1.09000 * 113.61578 * 25.43424 * 6 4 3 34 34 H 0.97005 * 119.99931 * 287.46791 * 9 7 6 35 35 H 1.08005 * 120.37234 * 359.97438 * 14 13 12 36 36 H 1.09001 * 109.46828 * 0.02562 * 16 15 14 37 37 H 0.96700 * 113.99923 * 60.00563 * 17 16 15 38 38 H 1.48500 * 110.00024 * 179.97438 * 18 16 15 39 39 H 1.48501 * 110.00231 * 301.31690 * 18 16 15 40 40 H 1.07995 * 119.84143 * 180.02562 * 19 15 14 41 41 H 1.08010 * 119.64505 * 179.97438 * 20 19 15 42 42 H 1.08003 * 125.63106 * 180.24652 * 23 22 21 43 43 H 1.08998 * 113.61879 * 270.88747 * 24 7 6 44 44 H 1.08997 * 113.69304 * 139.98833 * 24 7 6 45 45 H 1.08004 * 119.99281 * 180.25125 * 25 3 2 46 46 H 1.08004 * 120.00054 * 179.97438 * 26 25 3 47 47 H 1.08001 * 120.00009 * 179.97438 * 27 26 25 48 48 H 1.08000 * 119.99962 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4448 2.5020 -0.0006 5 1 0.3789 2.3767 0.1902 6 6 2.1010 3.5926 0.8625 7 6 1.7305 4.5863 -0.2511 8 1 2.5062 5.3250 -0.4529 9 7 0.4034 5.1851 -0.0883 10 6 0.2872 6.4750 0.2846 11 8 1.2849 7.1427 0.4857 12 6 -1.0406 7.0738 0.4480 13 6 -1.3220 8.4001 0.8297 14 6 -0.5064 9.4925 1.1523 15 6 -1.0860 10.6803 1.4910 16 6 -0.2311 11.8705 1.8428 17 8 -0.5057 12.9393 0.9350 18 14 -0.6147 12.4184 3.5815 19 6 -2.4837 10.7839 1.5088 20 6 -3.2510 9.7168 1.1928 21 7 -2.6817 8.5264 0.8537 22 7 -3.2352 7.2925 0.4910 23 6 -2.2772 6.4372 0.2457 24 6 1.7524 3.3904 -1.2176 25 6 3.5808 1.1968 0.0058 26 6 4.2717 -0.0001 0.0058 27 6 3.5804 -1.1974 0.0006 28 6 2.1983 -1.1974 -0.0038 29 1 -0.3632 0.0000 -1.0276 30 1 -0.3633 -0.8899 0.5138 31 1 -0.3633 0.8901 0.5138 32 1 1.5814 3.7769 1.8027 33 1 3.1754 3.4607 0.9903 34 1 -0.3917 4.6531 -0.2488 35 1 0.5691 9.3954 1.1331 36 1 0.8213 11.5955 1.7719 37 1 -1.4259 13.2364 0.9440 38 1 0.2225 13.5912 3.9408 39 1 -2.0536 12.7660 3.6988 40 1 -2.9498 11.7209 1.7755 41 1 -4.3271 9.8086 1.2105 42 1 -2.4136 5.4099 -0.0588 43 1 2.7315 3.2031 -1.6584 44 1 0.9520 3.4103 -1.9571 45 1 4.1207 2.1321 0.0099 46 1 5.3517 -0.0002 0.0100 47 1 4.1204 -2.1328 0.0002 48 1 1.6582 -2.1327 -0.0075 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_11618758.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:54 Heat of formation + Delta-G solvation = 94.164137 kcal Electronic energy + Delta-G solvation = -31226.544596 eV Core-core repulsion = 27022.689145 eV Total energy + Delta-G solvation = -4203.855451 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.157 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -43.31816 -41.53077 -40.22135 -39.38919 -38.60405 -37.31638 -34.58628 -34.17086 -33.66357 -32.11896 -31.66977 -30.20576 -27.85106 -27.34533 -26.65019 -26.10512 -24.98279 -23.95997 -23.14543 -22.78160 -21.80241 -21.36084 -20.02132 -19.17369 -18.59987 -17.95092 -17.72478 -17.36510 -16.99351 -16.87742 -16.56521 -16.35201 -15.97556 -15.84521 -15.63039 -15.46704 -15.22522 -14.92775 -14.79547 -14.67544 -14.24738 -14.22434 -13.93664 -13.82348 -13.55866 -13.48596 -13.37779 -13.23684 -13.14050 -12.78374 -12.65818 -12.47242 -12.12395 -12.01273 -11.90158 -11.66170 -11.58601 -11.45923 -11.11535 -10.96118 -10.88818 -10.32648 -10.05477 -9.64252 -9.39041 -8.79888 -4.89037 -0.56490 -0.13953 0.46405 0.51172 1.01904 1.03015 1.21337 1.59843 1.89070 2.08056 2.20291 2.48837 2.83421 3.08321 3.23354 3.36874 3.52513 3.54673 3.70795 3.74911 3.78080 3.86712 3.96365 4.00464 4.06149 4.09807 4.18649 4.21705 4.28620 4.35402 4.39658 4.45621 4.57817 4.62925 4.69542 4.76484 4.79790 4.85388 4.88231 4.93972 4.98142 5.05360 5.06801 5.10928 5.15431 5.21913 5.23370 5.28291 5.37244 5.59839 5.64975 5.66731 5.69005 5.82891 6.17544 6.28592 6.46185 6.62119 7.31493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.095 4.095 3 C -0.080 4.080 4 C -0.068 4.068 5 H 0.115 0.885 6 C -0.142 4.142 7 C 0.122 3.878 8 H 0.085 0.915 9 N -0.697 5.697 10 C 0.601 3.399 11 O -0.589 6.589 12 C -0.340 4.340 13 C 0.153 3.847 14 C -0.116 4.116 15 C -0.051 4.051 16 C -0.085 4.085 17 O -0.542 6.542 18 Si 0.768 3.232 19 C -0.157 4.157 20 C 0.118 3.882 21 N -0.274 5.274 22 N -0.339 5.339 23 C 0.131 3.869 24 C -0.124 4.124 25 C -0.124 4.124 26 C -0.138 4.138 27 C -0.134 4.134 28 C -0.135 4.135 29 H 0.078 0.922 30 H 0.068 0.932 31 H 0.079 0.921 32 H 0.067 0.933 33 H 0.093 0.907 34 H 0.413 0.587 35 H 0.151 0.849 36 H 0.123 0.877 37 H 0.390 0.610 38 H -0.294 1.294 39 H -0.253 1.253 40 H 0.190 0.810 41 H 0.205 0.795 42 H 0.234 0.766 43 H 0.096 0.904 44 H 0.087 0.913 45 H 0.131 0.869 46 H 0.131 0.869 47 H 0.131 0.869 48 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.512 -1.374 1.579 4.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.095 4.095 3 C -0.080 4.080 4 C -0.086 4.086 5 H 0.133 0.867 6 C -0.181 4.181 7 C 0.016 3.984 8 H 0.103 0.897 9 N -0.347 5.347 10 C 0.392 3.608 11 O -0.471 6.471 12 C -0.354 4.354 13 C 0.031 3.969 14 C -0.135 4.135 15 C -0.057 4.057 16 C -0.192 4.192 17 O -0.350 6.350 18 Si 0.668 3.332 19 C -0.178 4.178 20 C -0.008 4.008 21 N -0.038 5.038 22 N -0.159 5.159 23 C -0.049 4.049 24 C -0.162 4.162 25 C -0.141 4.141 26 C -0.156 4.156 27 C -0.152 4.152 28 C -0.152 4.152 29 H 0.096 0.904 30 H 0.087 0.913 31 H 0.098 0.902 32 H 0.085 0.915 33 H 0.112 0.888 34 H 0.250 0.750 35 H 0.169 0.831 36 H 0.141 0.859 37 H 0.241 0.759 38 H -0.221 1.221 39 H -0.178 1.178 40 H 0.207 0.793 41 H 0.222 0.778 42 H 0.250 0.750 43 H 0.115 0.885 44 H 0.106 0.894 45 H 0.149 0.851 46 H 0.149 0.851 47 H 0.149 0.851 48 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -4.835 -0.309 2.076 5.271 hybrid contribution 0.358 -0.090 -1.029 1.094 sum -4.477 -0.399 1.046 4.615 Atomic orbital electron populations 1.20912 0.89970 1.03513 1.03047 1.20095 0.97215 0.92628 0.99548 1.19718 0.93569 0.94429 1.00272 1.21672 1.00163 0.89750 0.97023 0.86671 1.23546 1.01837 0.94920 0.97788 1.21767 0.85176 0.94309 0.97164 0.89703 1.45209 1.08961 1.10719 1.69851 1.17002 0.86953 0.81608 0.75285 1.90758 1.39738 1.62764 1.53812 1.19671 0.94358 0.93992 1.27397 1.19546 0.84436 0.95547 0.97342 1.20660 1.01161 0.90294 1.01425 1.20564 0.94929 0.95520 0.94661 1.25300 1.02614 0.85468 1.05820 1.86681 1.34727 1.51776 1.61855 0.93426 0.79275 0.84214 0.76277 1.21091 0.92355 1.00173 1.04166 1.22183 1.02096 0.80411 0.96126 1.46301 1.05229 1.09887 1.42347 1.77572 1.21504 0.88638 1.28235 1.24605 0.87988 1.00476 0.91862 1.23350 1.03934 0.92771 0.96182 1.21213 0.94069 0.98551 1.00313 1.21378 1.00705 0.92716 1.00773 1.21396 0.94713 0.98759 1.00285 1.21302 0.94598 0.98228 1.01115 0.90372 0.91268 0.90204 0.91452 0.88832 0.75001 0.83102 0.85935 0.75950 1.22076 1.17750 0.79280 0.77789 0.74957 0.88522 0.89407 0.85115 0.85103 0.85122 0.85166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.41 9.53 71.24 0.68 1.09 16 2 C -0.09 -0.12 5.88 -19.86 -0.12 -0.23 16 3 C -0.08 -0.07 5.29 -19.87 -0.11 -0.18 16 4 C -0.07 0.20 3.58 -11.01 -0.04 0.16 16 5 H 0.12 -0.68 5.76 -2.39 -0.01 -0.69 16 6 C -0.14 0.09 7.26 31.12 0.23 0.32 16 7 C 0.12 0.02 4.32 45.52 0.20 0.22 16 8 H 0.08 0.41 7.46 -2.39 -0.02 0.39 16 9 N -0.70 0.23 5.26 -444.09 -2.33 -2.10 16 10 C 0.60 4.19 7.78 86.42 0.67 4.86 16 11 O -0.59 -8.54 15.30 -4.42 -0.07 -8.61 16 12 C -0.34 -1.80 6.17 -19.90 -0.12 -1.92 16 13 C 0.15 0.94 6.76 39.49 0.27 1.21 16 14 C -0.12 -0.48 9.35 22.30 0.21 -0.28 16 15 C -0.05 0.07 4.53 -19.81 -0.09 -0.02 16 16 C -0.08 0.21 2.84 71.24 0.20 0.42 16 17 O -0.54 0.16 12.88 -148.98 -1.92 -1.75 16 18 Si 0.77 -3.81 31.97 68.60 2.19 -1.62 16 19 C -0.16 0.90 8.38 22.03 0.18 1.08 16 20 C 0.12 -0.39 11.17 83.30 0.93 0.54 16 21 N -0.27 -0.97 3.86 -187.27 -0.72 -1.69 16 22 N -0.34 -1.47 12.57 -56.62 -0.71 -2.19 16 23 C 0.13 0.06 11.44 85.42 0.98 1.04 16 24 C -0.12 0.42 7.29 31.12 0.23 0.65 16 25 C -0.12 -0.21 8.61 22.27 0.19 -0.02 16 26 C -0.14 -0.31 10.05 22.27 0.22 -0.09 16 27 C -0.13 -0.31 10.05 22.27 0.22 -0.09 16 28 C -0.13 -0.28 9.70 22.27 0.22 -0.07 16 29 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 30 H 0.07 -0.27 8.09 -2.39 -0.02 -0.29 16 31 H 0.08 -0.46 5.99 -2.39 -0.01 -0.47 16 32 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 33 H 0.09 -0.04 6.31 -2.39 -0.02 -0.06 16 34 H 0.41 -2.83 7.62 -92.70 -0.71 -3.54 16 35 H 0.15 0.96 7.01 -2.91 -0.02 0.94 16 36 H 0.12 -0.25 7.71 -2.39 -0.02 -0.27 16 37 H 0.39 -3.30 8.08 -74.06 -0.60 -3.90 16 38 H -0.29 -0.88 7.11 99.48 0.71 -0.17 16 39 H -0.25 1.18 7.05 99.48 0.70 1.88 16 40 H 0.19 -2.43 7.26 -2.91 -0.02 -2.45 16 41 H 0.21 -2.00 8.06 -2.91 -0.02 -2.02 16 42 H 0.23 -2.17 7.46 -2.91 -0.02 -2.19 16 43 H 0.10 -0.27 7.72 -2.39 -0.02 -0.29 16 44 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 45 H 0.13 -0.11 6.66 -2.91 -0.02 -0.13 16 46 H 0.13 -0.11 8.06 -2.91 -0.02 -0.13 16 47 H 0.13 -0.10 8.06 -2.91 -0.02 -0.13 16 48 H 0.13 -0.12 8.06 -2.91 -0.02 -0.14 16 Total: 0.00 -25.10 395.76 1.34 -23.76 By element: Atomic # 1 Polarization: -14.24 SS G_CDS: -0.25 Total: -14.49 kcal Atomic # 6 Polarization: 3.54 SS G_CDS: 5.15 Total: 8.69 kcal Atomic # 7 Polarization: -2.21 SS G_CDS: -3.77 Total: -5.98 kcal Atomic # 8 Polarization: -8.38 SS G_CDS: -1.99 Total: -10.36 kcal Atomic # 14 Polarization: -3.81 SS G_CDS: 2.19 Total: -1.62 kcal Total: -25.10 1.34 -23.76 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_11618758.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.920 kcal (2) G-P(sol) polarization free energy of solvation -25.098 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.342 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.756 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.164 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds