Wall clock time and date at job start Tue Mar 9 2021 13:13:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38215 * 119.99534 * 2 1 4 4 C 1.50700 * 120.00244 * 0.02562 * 3 2 1 5 5 H 1.08999 * 112.84821 * 11.19044 * 4 3 2 6 6 C 1.53777 * 113.61558 * 142.50238 * 4 3 2 7 7 C 1.53783 * 87.08041 * 139.97950 * 6 4 3 8 8 H 1.09001 * 113.68868 * 220.00302 * 7 6 4 9 9 N 1.46499 * 113.61260 * 89.11483 * 7 6 4 10 10 C 1.34776 * 119.99774 * 107.50643 * 9 7 6 11 11 O 1.21568 * 120.00321 * 359.97438 * 10 9 7 12 12 C 1.47692 * 119.99758 * 179.97438 * 10 9 7 13 13 C 1.39834 * 120.16670 * 179.97438 * 12 10 9 14 14 F 1.35099 * 120.10703 * 359.97438 * 13 12 10 15 15 C 1.38316 * 119.78128 * 180.02562 * 13 12 10 16 16 C 1.38205 * 120.11398 * 0.02562 * 15 13 12 17 17 C 1.38458 * 120.34193 * 0.02562 * 16 15 13 18 18 C 1.50703 * 119.89239 * 179.97438 * 17 16 15 19 19 O 1.42903 * 109.47303 * 119.99367 * 18 17 16 20 20 Si 1.86308 * 109.47024 * 359.97438 * 18 17 16 21 21 C 1.37858 * 120.22112 * 359.71391 * 17 16 15 22 22 C 1.53781 * 87.08078 * 334.56235 * 7 6 4 23 23 C 1.38260 * 119.99680 * 179.97438 * 3 2 1 24 24 C 1.38211 * 120.00023 * 0.02898 * 23 3 2 25 25 C 1.38258 * 120.00136 * 359.76058 * 24 23 3 26 26 C 1.38211 * 119.99779 * 0.47373 * 25 24 23 27 27 H 1.09002 * 109.46776 * 269.96948 * 1 2 3 28 28 H 1.08993 * 109.47429 * 29.97620 * 1 2 3 29 29 H 1.08998 * 109.46961 * 149.97871 * 1 2 3 30 30 H 1.09009 * 113.61202 * 254.52437 * 6 4 3 31 31 H 1.08996 * 113.61760 * 25.42513 * 6 4 3 32 32 H 0.96995 * 120.00407 * 287.49378 * 9 7 6 33 33 H 1.07993 * 119.94484 * 180.02562 * 15 13 12 34 34 H 1.08001 * 119.82958 * 180.02562 * 16 15 13 35 35 H 1.08996 * 109.47282 * 239.99890 * 18 17 16 36 36 H 0.96693 * 114.00131 * 179.97438 * 19 18 17 37 37 H 1.48493 * 109.99749 * 59.99809 * 20 18 17 38 38 H 1.48495 * 110.00102 * 181.32051 * 20 18 17 39 39 H 1.07987 * 120.06438 * 180.29977 * 21 17 16 40 40 H 1.08988 * 113.61804 * 270.88720 * 22 7 6 41 41 H 1.09004 * 113.68489 * 139.99327 * 22 7 6 42 42 H 1.08001 * 119.99614 * 180.02562 * 23 3 2 43 43 H 1.08004 * 119.99459 * 179.97438 * 24 23 3 44 44 H 1.07998 * 119.99837 * 180.25416 * 25 24 23 45 45 H 1.08002 * 120.00200 * 179.78851 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1980 1.1970 0.0000 4 6 1.4444 2.5021 0.0006 5 1 0.3796 2.3759 0.1959 6 6 2.1048 3.5944 0.8583 7 6 1.7288 4.5859 -0.2554 8 1 2.5025 5.3251 -0.4633 9 7 0.4021 5.1836 -0.0857 10 6 0.2868 6.4741 0.2853 11 8 1.2837 7.1422 0.4796 12 6 -1.0507 7.0767 0.4559 13 6 -1.1744 8.4152 0.8412 14 9 -0.0703 9.1624 1.0595 15 6 -2.4310 8.9714 0.9991 16 6 -3.5606 8.2066 0.7773 17 6 -3.4438 6.8805 0.3967 18 6 -4.6824 6.0558 0.1580 19 8 -4.6886 5.5850 -1.1912 20 14 -6.1935 7.1036 0.4576 21 6 -2.1983 6.3135 0.2300 22 6 1.7462 3.3881 -1.2197 23 6 3.5806 1.1971 0.0005 24 6 4.2717 0.0001 0.0005 25 6 3.5805 -1.1972 0.0049 26 6 2.1984 -1.1973 -0.0006 27 1 -0.3633 -0.0005 1.0277 28 1 -0.3634 0.8901 -0.5134 29 1 -0.3633 -0.8898 -0.5142 30 1 1.5897 3.7805 1.8008 31 1 3.1798 3.4627 0.9811 32 1 -0.3934 4.6506 -0.2405 33 1 -2.5296 10.0049 1.2962 34 1 -4.5395 8.6456 0.9016 35 1 -4.6895 5.2053 0.8397 36 1 -5.4587 5.0452 -1.4159 37 1 -6.1958 8.2669 -0.4653 38 1 -7.4215 6.2932 0.2566 39 1 -2.1102 5.2804 -0.0717 40 1 2.7231 3.2001 -1.6648 41 1 0.9422 3.4065 -1.9554 42 1 4.1205 2.1324 0.0010 43 1 5.3517 0.0003 0.0005 44 1 4.1205 -2.1325 0.0090 45 1 1.6584 -2.1326 -0.0006 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_12335834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:06 Heat of formation + Delta-G solvation = -28.946235 kcal Electronic energy + Delta-G solvation = -28972.840385 eV Core-core repulsion = 24837.034214 eV Total energy + Delta-G solvation = -4135.806171 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.142 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -49.81903 -41.77955 -40.89596 -39.89209 -38.69068 -37.72783 -34.75190 -33.79743 -32.77395 -32.44282 -31.38385 -27.94304 -26.78054 -26.73340 -26.43591 -25.27831 -23.53117 -22.71437 -21.87265 -21.54232 -20.13921 -19.11117 -18.75680 -18.33846 -17.72085 -17.61568 -16.87717 -16.72889 -16.52374 -16.40441 -15.95559 -15.82612 -15.71741 -15.66051 -14.97333 -14.93214 -14.86186 -14.44898 -14.32098 -14.18314 -14.01530 -13.85829 -13.65455 -13.50986 -13.32174 -13.26510 -12.84918 -12.78938 -12.73408 -12.55207 -12.10772 -11.91880 -11.75529 -11.59081 -11.20652 -10.99931 -10.69769 -10.38680 -10.09235 -9.79973 -9.66543 -9.42893 -5.12380 -0.48593 -0.07205 0.43534 0.49460 1.08368 1.44574 1.66781 1.80841 1.95443 2.47058 2.80004 3.03728 3.05901 3.37002 3.38851 3.49843 3.59069 3.63346 3.68368 3.86683 3.91362 3.96871 4.01333 4.03236 4.12063 4.14528 4.20384 4.36205 4.45300 4.55153 4.58707 4.66593 4.67051 4.67919 4.73569 4.75208 4.83615 4.86378 4.87633 4.93732 4.96946 5.08191 5.09881 5.16589 5.23980 5.49406 5.55932 5.62357 5.64868 5.76438 6.12381 6.23228 6.37975 7.14442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.077 4.077 5 H 0.100 0.900 6 C -0.143 4.143 7 C 0.120 3.880 8 H 0.108 0.892 9 N -0.708 5.708 10 C 0.563 3.437 11 O -0.518 6.518 12 C -0.175 4.175 13 C 0.167 3.833 14 F -0.110 7.110 15 C -0.156 4.156 16 C -0.057 4.057 17 C -0.094 4.094 18 C -0.075 4.075 19 O -0.536 6.536 20 Si 0.681 3.319 21 C -0.030 4.030 22 C -0.135 4.135 23 C -0.113 4.113 24 C -0.123 4.123 25 C -0.120 4.120 26 C -0.119 4.119 27 H 0.070 0.930 28 H 0.068 0.932 29 H 0.066 0.934 30 H 0.075 0.925 31 H 0.096 0.904 32 H 0.400 0.600 33 H 0.151 0.849 34 H 0.142 0.858 35 H 0.082 0.918 36 H 0.383 0.617 37 H -0.252 1.252 38 H -0.258 1.258 39 H 0.137 0.863 40 H 0.099 0.901 41 H 0.076 0.924 42 H 0.123 0.877 43 H 0.122 0.878 44 H 0.121 0.879 45 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.474 -3.324 1.470 6.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.095 4.095 5 H 0.118 0.882 6 C -0.181 4.181 7 C 0.015 3.985 8 H 0.126 0.874 9 N -0.360 5.360 10 C 0.350 3.650 11 O -0.393 6.393 12 C -0.179 4.179 13 C 0.147 3.853 14 F -0.088 7.088 15 C -0.174 4.174 16 C -0.075 4.075 17 C -0.094 4.094 18 C -0.184 4.184 19 O -0.344 6.344 20 Si 0.581 3.419 21 C -0.048 4.048 22 C -0.173 4.173 23 C -0.131 4.131 24 C -0.141 4.141 25 C -0.138 4.138 26 C -0.137 4.137 27 H 0.089 0.911 28 H 0.087 0.913 29 H 0.085 0.915 30 H 0.093 0.907 31 H 0.115 0.885 32 H 0.236 0.764 33 H 0.169 0.831 34 H 0.160 0.840 35 H 0.100 0.900 36 H 0.231 0.769 37 H -0.176 1.176 38 H -0.183 1.183 39 H 0.155 0.845 40 H 0.118 0.882 41 H 0.095 0.905 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -4.865 -2.140 1.252 5.461 hybrid contribution -0.307 -1.207 -0.914 1.544 sum -5.172 -3.347 0.338 6.170 Atomic orbital electron populations 1.20854 0.91372 1.02846 1.02404 1.19784 0.95987 0.92656 0.99876 1.19512 0.93476 0.93709 1.00548 1.21659 0.99641 0.90905 0.97284 0.88191 1.23565 1.01952 0.94505 0.98096 1.21881 0.85314 0.94752 0.96587 0.87440 1.45526 1.08772 1.11380 1.70308 1.17954 0.88279 0.81768 0.77043 1.90872 1.38104 1.61140 1.49225 1.20029 0.94380 0.94137 1.09388 1.17736 0.83418 0.87977 0.96219 1.91630 1.51074 1.75158 1.90976 1.21140 0.90069 1.02056 1.04165 1.21029 0.98652 0.92423 0.95405 1.19204 0.93873 0.94081 1.02233 1.24755 1.04289 1.02996 0.86381 1.86572 1.48374 1.72165 1.27260 0.95083 0.75245 0.80463 0.91083 1.20975 0.90178 0.99583 0.94100 1.23427 1.03695 0.93918 0.96269 1.21006 0.93599 0.98207 1.00300 1.21152 0.99990 0.92498 1.00456 1.21169 0.94346 0.98206 1.00068 1.21055 0.94352 0.97491 1.00842 0.91104 0.91329 0.91464 0.90660 0.88523 0.76420 0.83105 0.84030 0.90042 0.76852 1.17629 1.18286 0.84523 0.88221 0.90500 0.85924 0.86041 0.86081 0.86107 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.16 9.33 36.01 0.34 0.50 16 2 C -0.08 -0.06 5.88 -104.62 -0.62 -0.67 16 3 C -0.07 -0.04 5.29 -104.62 -0.55 -0.59 16 4 C -0.08 0.09 3.41 -90.96 -0.31 -0.22 16 5 H 0.10 -0.21 6.08 -51.93 -0.32 -0.52 16 6 C -0.14 0.06 7.25 -25.92 -0.19 -0.13 16 7 C 0.12 0.01 4.32 -67.12 -0.29 -0.28 16 8 H 0.11 0.19 7.46 -51.93 -0.39 -0.19 16 9 N -0.71 -0.07 5.21 -54.01 -0.28 -0.35 16 10 C 0.56 1.86 7.77 -12.40 -0.10 1.76 16 11 O -0.52 -3.79 14.94 5.31 0.08 -3.71 16 12 C -0.18 -0.32 5.88 -104.91 -0.62 -0.94 16 13 C 0.17 0.41 7.29 -38.96 -0.28 0.13 16 14 F -0.11 -0.57 15.55 2.25 0.04 -0.53 16 15 C -0.16 0.06 10.01 -39.56 -0.40 -0.34 16 16 C -0.06 0.09 8.66 -39.51 -0.34 -0.26 16 17 C -0.09 0.10 5.42 -104.68 -0.57 -0.47 16 18 C -0.07 0.19 2.81 36.01 0.10 0.29 16 19 O -0.54 0.74 12.74 -35.23 -0.45 0.29 16 20 Si 0.68 -1.99 29.78 -169.99 -5.06 -7.05 16 21 C -0.03 0.02 9.09 -39.19 -0.36 -0.34 16 22 C -0.14 0.18 7.29 -25.92 -0.19 -0.01 16 23 C -0.11 -0.07 8.61 -39.58 -0.34 -0.42 16 24 C -0.12 -0.10 10.05 -39.58 -0.40 -0.50 16 25 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 26 C -0.12 -0.11 9.70 -39.58 -0.38 -0.49 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 28 H 0.07 -0.15 6.34 -51.93 -0.33 -0.48 16 29 H 0.07 -0.12 8.09 -51.93 -0.42 -0.54 16 30 H 0.07 0.02 8.14 -51.92 -0.42 -0.40 16 31 H 0.10 -0.06 6.31 -51.93 -0.33 -0.38 16 32 H 0.40 -0.98 6.73 -40.82 -0.27 -1.26 16 33 H 0.15 -0.38 8.06 -52.49 -0.42 -0.80 16 34 H 0.14 -0.54 4.86 -52.49 -0.25 -0.80 16 35 H 0.08 -0.37 7.96 -51.93 -0.41 -0.78 16 36 H 0.38 -1.94 8.74 45.56 0.40 -1.55 16 37 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 38 H -0.26 0.17 7.11 56.52 0.40 0.57 16 39 H 0.14 -0.38 6.40 -52.49 -0.34 -0.71 16 40 H 0.10 -0.13 7.72 -51.94 -0.40 -0.53 16 41 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 42 H 0.12 -0.09 6.66 -52.49 -0.35 -0.44 16 43 H 0.12 -0.09 8.06 -52.48 -0.42 -0.51 16 44 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 45 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 LS Contribution 370.54 15.07 5.58 5.58 Total: 0.00 -8.78 370.54 -11.55 -20.33 By element: Atomic # 1 Polarization: -5.52 SS G_CDS: -5.57 Total: -11.09 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -5.89 Total: -3.47 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -0.28 Total: -0.35 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.37 Total: -3.42 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.04 Total: -0.53 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: -5.06 Total: -7.05 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -8.78 -11.55 -20.33 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_12335834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.612 kcal (2) G-P(sol) polarization free energy of solvation -8.784 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.396 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.550 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.334 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds