Wall clock time and date at job start Tue Mar 9 2021 13:13:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38216 * 119.99819 * 2 1 4 4 C 1.50700 * 120.00003 * 359.97438 * 3 2 1 5 5 H 1.08997 * 112.84847 * 348.78101 * 4 3 2 6 6 C 1.53784 * 113.61631 * 119.97694 * 4 3 2 7 7 C 1.53782 * 87.08089 * 139.97838 * 6 4 3 8 8 H 1.08994 * 113.61489 * 220.01808 * 7 6 4 9 9 N 1.46501 * 113.61154 * 89.20001 * 7 6 4 10 10 C 1.34773 * 119.99734 * 154.99662 * 9 7 6 11 11 O 1.21283 * 120.00247 * 0.02562 * 10 9 7 12 12 C 1.50707 * 120.00043 * 179.97438 * 10 9 7 13 13 C 1.50699 * 109.47137 * 179.97438 * 12 10 9 14 14 C 1.38231 * 120.00176 * 269.72794 * 13 12 10 15 15 C 1.38232 * 119.99818 * 179.80876 * 14 13 12 16 16 C 1.38236 * 120.00110 * 0.40354 * 15 14 13 17 17 C 1.50696 * 120.00307 * 179.83088 * 16 15 14 18 18 O 1.42899 * 109.47372 * 120.01706 * 17 16 15 19 19 Si 1.86305 * 109.46852 * 0.02562 * 17 16 15 20 20 C 1.38239 * 120.00139 * 359.85098 * 16 15 14 21 21 C 1.38239 * 119.99756 * 359.95659 * 20 16 15 22 22 C 1.53781 * 113.61400 * 217.47645 * 4 3 2 23 23 C 1.38254 * 119.99725 * 179.97438 * 3 2 1 24 24 C 1.38212 * 120.00319 * 0.02562 * 23 3 2 25 25 C 1.38260 * 119.99650 * 0.26336 * 24 23 3 26 26 C 1.38209 * 120.00092 * 359.45889 * 25 24 23 27 27 H 1.08990 * 109.46945 * 90.00098 * 1 2 3 28 28 H 1.09001 * 109.46746 * 209.99737 * 1 2 3 29 29 H 1.08996 * 109.46909 * 329.99403 * 1 2 3 30 30 H 1.08999 * 113.61346 * 254.53439 * 6 4 3 31 31 H 1.09006 * 113.60693 * 25.43180 * 6 4 3 32 32 H 0.96997 * 120.00010 * 335.00237 * 9 7 6 33 33 H 1.09004 * 109.46994 * 300.00623 * 12 10 9 34 34 H 1.09003 * 109.46849 * 60.00358 * 12 10 9 35 35 H 1.07997 * 119.99832 * 0.02562 * 14 13 12 36 36 H 1.08002 * 120.00065 * 180.22841 * 15 14 13 37 37 H 1.08999 * 109.47687 * 240.02175 * 17 16 15 38 38 H 0.96702 * 114.00104 * 300.00433 * 18 17 16 39 39 H 1.48502 * 109.99734 * 179.97438 * 19 17 16 40 40 H 1.48498 * 109.99931 * 301.31395 * 19 17 16 41 41 H 1.07997 * 120.00529 * 179.97438 * 20 16 15 42 42 H 1.07997 * 119.99882 * 180.02562 * 21 20 16 43 43 H 1.09005 * 113.61244 * 334.56294 * 22 4 3 44 44 H 1.08996 * 113.61572 * 105.46822 * 22 4 3 45 45 H 1.07999 * 119.99740 * 180.02562 * 23 3 2 46 46 H 1.08002 * 119.99812 * 179.97438 * 24 23 3 47 47 H 1.08004 * 119.99616 * 179.72197 * 25 24 23 48 48 H 1.08000 * 119.99979 * 180.30237 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4446 2.5021 -0.0006 5 1 0.3798 2.3759 -0.1964 6 6 1.7457 3.3879 1.2199 7 6 1.7289 4.5859 0.2558 8 1 2.5034 5.3242 0.4633 9 7 0.4026 5.1848 0.0872 10 6 0.2883 6.4755 -0.2835 11 8 1.2834 7.1411 -0.4780 12 6 -1.0761 7.0915 -0.4576 13 6 -0.9274 8.5329 -0.8716 14 6 -0.8625 9.5248 0.0890 15 6 -0.7221 10.8465 -0.2906 16 6 -0.6550 11.1772 -1.6312 17 6 -0.5058 12.6184 -2.0453 18 8 0.7015 12.7766 -2.7933 19 14 -0.4416 13.6970 -0.5276 20 6 -0.7251 10.1858 -2.5920 21 6 -0.8615 8.8636 -2.2122 22 6 2.1053 3.5945 -0.8579 23 6 3.5807 1.1970 0.0005 24 6 4.2718 0.0001 0.0005 25 6 3.5804 -1.1973 -0.0055 26 6 2.1984 -1.1973 -0.0002 27 1 -0.3633 0.0000 -1.0276 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3633 0.8899 0.5139 30 1 0.9408 3.4073 1.9546 31 1 2.7226 3.1997 1.6655 32 1 -0.3932 4.6525 0.2424 33 1 -1.6252 6.5471 -1.2259 34 1 -1.6213 7.0390 0.4848 35 1 -0.9180 9.2667 1.1362 36 1 -0.6677 11.6211 0.4600 37 1 -1.3561 12.9093 -2.6620 38 1 1.5009 12.5357 -2.3054 39 1 -0.2939 15.1210 -0.9224 40 1 -1.6777 13.5178 0.2755 41 1 -0.6731 10.4441 -3.6394 42 1 -0.9159 8.0890 -2.9629 43 1 3.1804 3.4629 -0.9802 44 1 1.5906 3.7807 -1.8005 45 1 4.1206 2.1323 0.0010 46 1 5.3518 0.0001 0.0005 47 1 4.1205 -2.1326 -0.0100 48 1 1.6584 -2.1326 0.0000 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_12335836.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:10 Heat of formation + Delta-G solvation = 4.310398 kcal Electronic energy + Delta-G solvation = -27704.457410 eV Core-core repulsion = 23884.009711 eV Total energy + Delta-G solvation = -3820.447699 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.167 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.72405 -40.87348 -40.04146 -38.76014 -37.53681 -34.60080 -34.00527 -33.71664 -31.90511 -31.66221 -29.71049 -27.92715 -26.79318 -26.37475 -25.48188 -23.77453 -23.23200 -22.30475 -21.87629 -21.35420 -20.11393 -18.42963 -18.27441 -17.54823 -17.28299 -16.90723 -16.67094 -16.44109 -16.18026 -15.97443 -15.91620 -15.51991 -15.08849 -15.02128 -14.89344 -14.64776 -14.45963 -14.45591 -14.03117 -13.95085 -13.73424 -13.52476 -13.28510 -13.25748 -13.14767 -12.86989 -12.81276 -12.67335 -12.18945 -12.11987 -11.90381 -11.75952 -11.64062 -11.59915 -11.21820 -10.89433 -10.38201 -10.08888 -9.82378 -9.67789 -9.56824 -9.43995 -4.98525 0.27955 0.42404 0.48266 0.50786 1.34393 1.63305 1.66139 1.99832 2.06800 2.78830 2.81501 3.39426 3.49716 3.58627 3.62088 3.65092 3.78042 3.83814 3.89103 3.93709 3.96140 4.00342 4.05549 4.11173 4.19232 4.24958 4.35283 4.37405 4.49758 4.54212 4.55865 4.57520 4.65661 4.66624 4.72296 4.73620 4.79005 4.85455 4.92386 4.94932 5.02130 5.09671 5.11060 5.15559 5.22926 5.41571 5.51567 5.58782 5.61552 5.61862 5.63791 5.75377 6.03951 6.11262 6.44191 6.63171 7.22262 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.076 4.076 5 H 0.100 0.900 6 C -0.135 4.135 7 C 0.120 3.880 8 H 0.105 0.895 9 N -0.716 5.716 10 C 0.517 3.483 11 O -0.524 6.524 12 C -0.104 4.104 13 C -0.064 4.064 14 C -0.100 4.100 15 C -0.116 4.116 16 C -0.119 4.119 17 C -0.068 4.068 18 O -0.541 6.541 19 Si 0.688 3.312 20 C -0.091 4.091 21 C -0.103 4.103 22 C -0.143 4.143 23 C -0.113 4.113 24 C -0.123 4.123 25 C -0.120 4.120 26 C -0.119 4.119 27 H 0.070 0.930 28 H 0.066 0.934 29 H 0.068 0.932 30 H 0.076 0.924 31 H 0.097 0.903 32 H 0.401 0.599 33 H 0.105 0.895 34 H 0.105 0.895 35 H 0.124 0.876 36 H 0.126 0.874 37 H 0.113 0.887 38 H 0.380 0.620 39 H -0.255 1.255 40 H -0.258 1.258 41 H 0.126 0.874 42 H 0.122 0.878 43 H 0.095 0.905 44 H 0.073 0.927 45 H 0.123 0.877 46 H 0.121 0.879 47 H 0.121 0.879 48 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.773 -4.150 2.895 5.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.094 4.094 5 H 0.118 0.882 6 C -0.173 4.173 7 C 0.014 3.986 8 H 0.123 0.877 9 N -0.368 5.368 10 C 0.303 3.697 11 O -0.399 6.399 12 C -0.143 4.143 13 C -0.064 4.064 14 C -0.118 4.118 15 C -0.133 4.133 16 C -0.119 4.119 17 C -0.179 4.179 18 O -0.346 6.346 19 Si 0.590 3.410 20 C -0.109 4.109 21 C -0.121 4.121 22 C -0.182 4.182 23 C -0.131 4.131 24 C -0.141 4.141 25 C -0.138 4.138 26 C -0.137 4.137 27 H 0.089 0.911 28 H 0.085 0.915 29 H 0.087 0.913 30 H 0.094 0.906 31 H 0.116 0.884 32 H 0.235 0.765 33 H 0.123 0.877 34 H 0.123 0.877 35 H 0.142 0.858 36 H 0.143 0.857 37 H 0.130 0.870 38 H 0.227 0.773 39 H -0.180 1.180 40 H -0.183 1.183 41 H 0.144 0.856 42 H 0.140 0.860 43 H 0.113 0.887 44 H 0.092 0.908 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.139 0.861 48 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -1.847 -2.780 2.746 4.322 hybrid contribution -0.666 -0.878 -0.403 1.174 sum -2.513 -3.659 2.343 5.019 Atomic orbital electron populations 1.20854 0.91349 1.02857 1.02409 1.19791 0.95998 0.92665 0.99875 1.19517 0.93468 0.93745 1.00541 1.21651 0.99635 0.90853 0.97299 0.88167 1.23418 1.03539 0.94099 0.96252 1.21836 0.85792 0.94584 0.96348 0.87728 1.45697 1.08468 1.11825 1.70810 1.20575 0.91477 0.81383 0.76246 1.90759 1.39087 1.61210 1.48801 1.20696 0.95269 0.93768 1.04603 1.19256 1.00124 0.93401 0.93628 1.20903 0.99444 0.92273 0.99150 1.20940 1.00945 0.96500 0.94921 1.20328 1.01797 0.96179 0.93607 1.25047 0.90130 0.96898 1.05844 1.86488 1.15327 1.89588 1.43221 0.94611 0.88188 0.78796 0.79361 1.20955 0.98283 0.92085 0.99569 1.21016 0.99435 0.96455 0.95241 1.23556 1.01828 0.94700 0.98100 1.21000 0.93612 0.98182 1.00340 1.21154 0.99988 0.92507 1.00465 1.21170 0.94345 0.98207 1.00053 1.21058 0.94355 0.97507 1.00821 0.91118 0.91461 0.91309 0.90569 0.88411 0.76481 0.87714 0.87668 0.85792 0.85661 0.86993 0.77269 1.18013 1.18332 0.85628 0.86025 0.88712 0.90816 0.85961 0.86048 0.86082 0.86106 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.19 9.33 36.01 0.34 0.53 16 2 C -0.08 -0.04 5.88 -104.62 -0.62 -0.65 16 3 C -0.07 -0.01 5.29 -104.62 -0.55 -0.56 16 4 C -0.08 0.13 3.41 -90.96 -0.31 -0.18 16 5 H 0.10 -0.27 6.08 -51.93 -0.32 -0.58 16 6 C -0.14 0.29 7.29 -25.92 -0.19 0.10 16 7 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 8 H 0.10 0.09 7.46 -51.93 -0.39 -0.30 16 9 N -0.72 1.37 5.27 -53.01 -0.28 1.09 16 10 C 0.52 0.25 7.82 -10.98 -0.09 0.16 16 11 O -0.52 -2.61 15.63 5.56 0.09 -2.52 16 12 C -0.10 0.20 5.83 -29.03 -0.17 0.03 16 13 C -0.06 -0.05 4.37 -104.62 -0.46 -0.51 16 14 C -0.10 -0.08 9.70 -39.59 -0.38 -0.46 16 15 C -0.12 -0.10 8.67 -39.58 -0.34 -0.44 16 16 C -0.12 -0.17 5.39 -104.62 -0.56 -0.74 16 17 C -0.07 -0.06 2.82 36.00 0.10 0.04 16 18 O -0.54 -0.83 12.77 -35.23 -0.45 -1.28 16 19 Si 0.69 -0.08 29.79 -169.99 -5.06 -5.14 16 20 C -0.09 -0.17 9.61 -39.58 -0.38 -0.55 16 21 C -0.10 -0.14 9.70 -39.58 -0.38 -0.52 16 22 C -0.14 0.15 7.26 -25.92 -0.19 -0.04 16 23 C -0.11 -0.04 8.61 -39.58 -0.34 -0.38 16 24 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 25 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 26 C -0.12 -0.08 9.70 -39.59 -0.38 -0.47 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 28 H 0.07 -0.13 8.09 -51.93 -0.42 -0.55 16 29 H 0.07 -0.18 6.34 -51.93 -0.33 -0.51 16 30 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 31 H 0.10 -0.18 7.72 -51.93 -0.40 -0.58 16 32 H 0.40 -1.85 8.70 -40.82 -0.36 -2.20 16 33 H 0.10 -0.41 8.09 -51.93 -0.42 -0.83 16 34 H 0.11 -0.43 8.08 -51.93 -0.42 -0.85 16 35 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 36 H 0.13 -0.12 4.88 -52.49 -0.26 -0.37 16 37 H 0.11 0.12 7.96 -51.93 -0.41 -0.29 16 38 H 0.38 -0.74 8.70 45.56 0.40 -0.35 16 39 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 40 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 41 H 0.13 0.17 8.06 -52.49 -0.42 -0.25 16 42 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 43 H 0.09 -0.09 6.31 -51.93 -0.33 -0.42 16 44 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 45 H 0.12 -0.12 6.66 -52.49 -0.35 -0.47 16 46 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 47 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 48 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 LS Contribution 390.62 15.07 5.89 5.89 Total: 0.00 -8.36 390.62 -12.82 -21.18 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -7.00 Total: -13.21 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: -6.00 Total: -6.00 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: -0.28 Total: 1.09 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.36 Total: -3.80 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: -5.06 Total: -5.14 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -8.36 -12.82 -21.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_12335836.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.490 kcal (2) G-P(sol) polarization free energy of solvation -8.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.818 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.180 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds