Wall clock time and date at job start Tue Mar 9 2021 13:13:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38214 * 120.00023 * 2 1 4 4 C 1.50699 * 119.99714 * 359.97438 * 3 2 1 5 5 H 1.09000 * 112.85488 * 11.20212 * 4 3 2 6 6 C 1.53786 * 113.61330 * 142.50586 * 4 3 2 7 7 C 1.53775 * 87.08065 * 139.98032 * 6 4 3 8 8 H 1.09006 * 113.61508 * 220.01592 * 7 6 4 9 9 N 1.46503 * 113.61688 * 89.11984 * 7 6 4 10 10 C 1.34774 * 120.00242 * 107.50023 * 9 7 6 11 11 O 1.21587 * 119.99994 * 359.97438 * 10 9 7 12 12 C 1.47578 * 119.99874 * 180.02562 * 10 9 7 13 13 C 1.40200 * 119.83374 * 359.72069 * 12 10 9 14 14 C 1.36240 * 120.37960 * 179.75689 * 13 12 10 15 15 C 1.39877 * 119.95748 * 0.52339 * 14 13 12 16 16 C 1.46258 * 133.84065 * 179.76340 * 15 14 13 17 17 C 1.50695 * 126.48332 * 359.97438 * 16 15 14 18 18 O 1.42893 * 109.47519 * 74.99789 * 17 16 15 19 19 Si 1.86299 * 109.47105 * 194.99969 * 17 16 15 20 20 C 1.34451 * 107.03136 * 179.97438 * 16 15 14 21 21 N 1.36560 * 109.98922 * 359.97438 * 20 16 15 22 22 C 1.37832 * 109.85927 * 0.02562 * 21 20 16 23 23 C 1.38649 * 133.37674 * 180.02562 * 22 21 20 24 24 C 1.53775 * 87.08452 * 334.56658 * 7 6 4 25 25 C 1.38253 * 120.00348 * 179.97438 * 3 2 1 26 26 C 1.38217 * 119.99650 * 359.97438 * 25 3 2 27 27 C 1.38263 * 120.00274 * 0.02562 * 26 25 3 28 28 C 1.38212 * 119.99580 * 359.74597 * 27 26 25 29 29 H 1.09002 * 109.47152 * 90.00127 * 1 2 3 30 30 H 1.09001 * 109.46980 * 330.00228 * 1 2 3 31 31 H 1.09004 * 109.47113 * 210.00208 * 1 2 3 32 32 H 1.09000 * 113.61286 * 254.53221 * 6 4 3 33 33 H 1.08999 * 113.61230 * 25.43227 * 6 4 3 34 34 H 0.97005 * 119.99799 * 287.49833 * 9 7 6 35 35 H 1.07998 * 119.81171 * 0.02562 * 13 12 10 36 36 H 1.08004 * 120.01622 * 180.23085 * 14 13 12 37 37 H 1.09000 * 109.47150 * 314.99352 * 17 16 15 38 38 H 0.96705 * 113.99968 * 59.99632 * 18 17 16 39 39 H 1.48504 * 110.00194 * 58.67336 * 19 17 16 40 40 H 1.48502 * 110.00155 * 179.97438 * 19 17 16 41 41 H 1.08007 * 125.00707 * 180.02562 * 20 16 15 42 42 H 0.97001 * 125.07123 * 179.97438 * 21 20 16 43 43 H 1.07999 * 120.16683 * 359.95144 * 23 22 21 44 44 H 1.09000 * 113.61694 * 270.88429 * 24 7 6 45 45 H 1.09003 * 113.69365 * 139.98977 * 24 7 6 46 46 H 1.07994 * 120.00426 * 180.02562 * 25 3 2 47 47 H 1.08001 * 119.99823 * 180.02562 * 26 25 3 48 48 H 1.08000 * 119.99843 * 180.02562 * 27 26 25 49 49 H 1.08000 * 120.00026 * 180.26820 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4446 2.5020 -0.0006 5 1 0.3795 2.3760 0.1942 6 6 2.1044 3.5947 0.8571 7 6 1.7292 4.5857 -0.2572 8 1 2.5040 5.3241 -0.4641 9 7 0.4024 5.1836 -0.0887 10 6 0.2869 6.4743 0.2817 11 8 1.2839 7.1424 0.4764 12 6 -1.0497 7.0763 0.4519 13 6 -2.1970 6.3041 0.2218 14 6 -3.4363 6.8471 0.3804 15 6 -3.5685 8.1856 0.7645 16 6 -4.7144 9.0598 1.0133 17 6 -6.1693 8.6834 0.9019 18 8 -6.5412 7.8812 2.0245 19 14 -7.2098 10.2284 0.8709 20 6 -4.2241 10.2627 1.3602 21 7 -2.8589 10.2297 1.3543 22 6 -2.4225 8.9730 0.9938 23 6 -1.1650 8.4107 0.8357 24 6 1.7471 3.3875 -1.2209 25 6 3.5806 1.1970 0.0005 26 6 4.2717 0.0000 0.0016 27 6 3.5804 -1.1974 0.0016 28 6 2.1983 -1.1973 0.0058 29 1 -0.3633 0.0000 -1.0277 30 1 -0.3633 0.8900 0.5138 31 1 -0.3633 -0.8900 0.5139 32 1 1.5887 3.7811 1.7991 33 1 3.1793 3.4631 0.9807 34 1 -0.3931 4.6505 -0.2438 35 1 -2.0977 5.2715 -0.0788 36 1 -4.3162 6.2458 0.2052 37 1 -6.3294 8.1191 -0.0168 38 1 -6.4247 8.3208 2.8779 39 1 -6.8111 11.0864 -0.2737 40 1 -8.6469 9.8709 0.7606 41 1 -4.8219 11.1274 1.6079 42 1 -2.2823 10.9791 1.5708 43 1 -0.2794 9.0042 1.0085 44 1 2.7244 3.1993 -1.6655 45 1 0.9436 3.4056 -1.9572 46 1 4.1206 2.1323 0.0010 47 1 5.3517 0.0001 0.0024 48 1 4.1205 -2.1326 0.0029 49 1 1.6583 -2.1326 0.0102 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:13 Heat of formation + Delta-G solvation = 45.148338 kcal Electronic energy + Delta-G solvation = -30874.583187 eV Core-core repulsion = 26734.028162 eV Total energy + Delta-G solvation = -4140.555025 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.162 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.49235 -41.62872 -40.41587 -38.85766 -37.83479 -37.42222 -34.58846 -33.73223 -33.25409 -31.74048 -30.72006 -30.40458 -27.89648 -26.74150 -26.60355 -26.21820 -24.68695 -23.62687 -22.97121 -21.83416 -21.52954 -20.82969 -20.08300 -19.43815 -18.39678 -17.67793 -17.60347 -17.03990 -16.90697 -16.61805 -16.20625 -16.00570 -15.84875 -15.66162 -15.55168 -15.17871 -14.97265 -14.92724 -14.83003 -14.70192 -14.45932 -14.20668 -14.01556 -13.98644 -13.65314 -13.47688 -13.26330 -13.11779 -12.85883 -12.69869 -12.59211 -12.31708 -12.24227 -12.06054 -11.92436 -11.71349 -11.53391 -11.16946 -10.90410 -10.75496 -10.36153 -10.05911 -9.63896 -9.40645 -9.35505 -8.81681 -5.11035 -0.26209 0.39357 0.46533 0.51952 1.27884 1.36590 1.61248 1.86753 1.96346 2.01371 2.21269 2.82961 2.93427 3.43477 3.54090 3.57456 3.66631 3.68237 3.75210 3.76676 3.86014 3.91716 3.99341 4.04183 4.09611 4.12741 4.23271 4.31406 4.38503 4.42047 4.48427 4.54875 4.59330 4.62939 4.69996 4.72011 4.72944 4.78561 4.84607 4.90054 4.97008 4.98663 5.00478 5.13364 5.19306 5.23651 5.27926 5.43273 5.45837 5.57592 5.60601 5.65565 5.67311 5.80177 5.98288 6.15062 6.35784 6.50423 6.64354 7.25167 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.078 4.078 5 H 0.101 0.899 6 C -0.144 4.144 7 C 0.120 3.880 8 H 0.106 0.894 9 N -0.709 5.709 10 C 0.566 3.434 11 O -0.536 6.536 12 C -0.121 4.121 13 C -0.113 4.113 14 C -0.073 4.073 15 C -0.063 4.063 16 C -0.211 4.211 17 C -0.030 4.030 18 O -0.542 6.542 19 Si 0.684 3.316 20 C 0.077 3.923 21 N -0.584 5.584 22 C 0.081 3.919 23 C -0.056 4.056 24 C -0.135 4.135 25 C -0.113 4.113 26 C -0.123 4.123 27 C -0.120 4.120 28 C -0.119 4.119 29 H 0.071 0.929 30 H 0.069 0.931 31 H 0.066 0.934 32 H 0.074 0.926 33 H 0.095 0.905 34 H 0.401 0.599 35 H 0.125 0.875 36 H 0.130 0.870 37 H 0.111 0.889 38 H 0.377 0.623 39 H -0.256 1.256 40 H -0.254 1.254 41 H 0.179 0.821 42 H 0.422 0.578 43 H 0.136 0.864 44 H 0.098 0.902 45 H 0.076 0.924 46 H 0.123 0.877 47 H 0.121 0.879 48 H 0.121 0.879 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.373 1.352 1.333 3.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.096 4.096 5 H 0.119 0.881 6 C -0.183 4.183 7 C 0.015 3.985 8 H 0.124 0.876 9 N -0.360 5.360 10 C 0.355 3.645 11 O -0.414 6.414 12 C -0.126 4.126 13 C -0.133 4.133 14 C -0.091 4.091 15 C -0.068 4.068 16 C -0.219 4.219 17 C -0.141 4.141 18 O -0.347 6.347 19 Si 0.586 3.414 20 C -0.051 4.051 21 N -0.186 5.186 22 C -0.025 4.025 23 C -0.077 4.077 24 C -0.173 4.173 25 C -0.131 4.131 26 C -0.141 4.141 27 C -0.138 4.138 28 C -0.137 4.137 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.085 0.915 32 H 0.093 0.907 33 H 0.114 0.886 34 H 0.237 0.763 35 H 0.143 0.857 36 H 0.148 0.852 37 H 0.129 0.871 38 H 0.224 0.776 39 H -0.181 1.181 40 H -0.179 1.179 41 H 0.196 0.804 42 H 0.260 0.740 43 H 0.154 0.846 44 H 0.117 0.883 45 H 0.095 0.905 46 H 0.140 0.860 47 H 0.139 0.861 48 H 0.139 0.861 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -2.303 2.007 0.570 3.107 hybrid contribution 0.310 -0.493 -0.293 0.652 sum -1.992 1.514 0.277 2.517 Atomic orbital electron populations 1.20877 0.91341 1.02883 1.02447 1.19789 0.96016 0.92659 0.99826 1.19506 0.93460 0.93744 1.00483 1.21691 0.99748 0.90864 0.97294 0.88058 1.23572 1.01871 0.94652 0.98159 1.21855 0.85539 0.94663 0.96484 0.87576 1.45556 1.08616 1.11598 1.70247 1.18149 0.88757 0.81428 0.76196 1.90793 1.38698 1.61519 1.50353 1.19405 0.92660 0.94184 1.06324 1.20677 0.91555 0.99435 1.01653 1.20203 0.97451 0.93052 0.98409 1.19174 0.91630 0.93835 1.02184 1.20730 0.95038 0.93385 1.12740 1.24327 0.93288 1.04568 0.91929 1.86505 1.87865 1.44047 1.16276 0.95276 0.79407 0.78429 0.88296 1.21749 0.82980 0.98851 1.01569 1.41722 1.06394 1.10843 1.59652 1.18074 0.94482 0.85798 1.04137 1.20077 0.94639 0.94110 0.98875 1.23414 1.03595 0.93980 0.96263 1.20997 0.93604 0.98175 1.00345 1.21148 0.99958 0.92511 1.00523 1.21165 0.94344 0.98186 1.00111 1.21056 0.94345 0.97497 1.00831 0.91052 0.91223 0.91493 0.90684 0.88629 0.76286 0.85714 0.85217 0.87147 0.77572 1.18093 1.17887 0.80434 0.73989 0.84590 0.88333 0.90507 0.85952 0.86079 0.86106 0.86114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.12 9.53 36.01 0.34 0.46 16 2 C -0.08 -0.08 5.88 -104.62 -0.62 -0.70 16 3 C -0.07 -0.05 5.29 -104.63 -0.55 -0.61 16 4 C -0.08 0.07 3.58 -90.96 -0.33 -0.25 16 5 H 0.10 -0.18 5.76 -51.93 -0.30 -0.48 16 6 C -0.14 0.03 7.25 -25.92 -0.19 -0.15 16 7 C 0.12 0.01 4.32 -67.12 -0.29 -0.28 16 8 H 0.11 0.18 7.47 -51.93 -0.39 -0.21 16 9 N -0.71 -0.09 5.21 -54.05 -0.28 -0.38 16 10 C 0.57 1.70 7.76 -12.45 -0.10 1.60 16 11 O -0.54 -3.50 15.91 5.29 0.08 -3.41 16 12 C -0.12 -0.24 5.87 -104.95 -0.62 -0.85 16 13 C -0.11 -0.03 9.46 -39.56 -0.37 -0.41 16 14 C -0.07 -0.07 10.03 -39.69 -0.40 -0.47 16 15 C -0.06 -0.10 6.35 -105.05 -0.67 -0.77 16 16 C -0.21 0.03 5.57 -102.74 -0.57 -0.55 16 17 C -0.03 0.02 3.06 36.00 0.11 0.13 16 18 O -0.54 0.01 12.88 -35.23 -0.45 -0.44 16 19 Si 0.68 -1.41 30.75 -169.99 -5.23 -6.64 16 20 C 0.08 -0.17 10.43 -16.78 -0.18 -0.34 16 21 N -0.58 0.88 6.07 -10.68 -0.06 0.81 16 22 C 0.08 0.10 7.26 -84.00 -0.61 -0.51 16 23 C -0.06 -0.11 9.61 -39.03 -0.37 -0.49 16 24 C -0.13 0.17 7.29 -25.92 -0.19 -0.02 16 25 C -0.11 -0.09 8.61 -39.58 -0.34 -0.43 16 26 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 27 C -0.12 -0.13 10.05 -39.58 -0.40 -0.53 16 28 C -0.12 -0.14 9.70 -39.58 -0.38 -0.52 16 29 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 30 H 0.07 -0.12 5.99 -51.93 -0.31 -0.43 16 31 H 0.07 -0.09 8.08 -51.93 -0.42 -0.51 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 33 H 0.10 -0.04 6.31 -51.93 -0.33 -0.37 16 34 H 0.40 -0.90 6.69 -40.82 -0.27 -1.18 16 35 H 0.13 -0.31 6.36 -52.49 -0.33 -0.64 16 36 H 0.13 -0.01 8.06 -52.48 -0.42 -0.43 16 37 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 38 H 0.38 -1.47 8.70 45.56 0.40 -1.07 16 39 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 40 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 41 H 0.18 -1.05 6.35 -52.48 -0.33 -1.38 16 42 H 0.42 -1.78 8.96 -40.82 -0.37 -2.15 16 43 H 0.14 0.25 7.62 -52.49 -0.40 -0.15 16 44 H 0.10 -0.12 7.72 -51.93 -0.40 -0.52 16 45 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 46 H 0.12 -0.07 6.66 -52.49 -0.35 -0.42 16 47 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 48 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 49 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 LS Contribution 399.27 15.07 6.02 6.02 Total: 0.00 -9.79 399.27 -13.41 -23.21 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -6.38 Total: -12.96 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -7.11 Total: -6.21 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -0.35 Total: 0.44 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.37 Total: -3.85 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.23 Total: -6.64 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.79 -13.41 -23.21 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.356 kcal (2) G-P(sol) polarization free energy of solvation -9.793 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.207 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.148 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds