Wall clock time and date at job start Tue Mar 9 2021 13:13:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38217 * 120.00007 * 2 1 4 4 C 1.50706 * 119.99801 * 0.02562 * 3 2 1 5 5 H 1.08993 * 112.84789 * 348.77794 * 4 3 2 6 6 C 1.53777 * 113.61342 * 119.97357 * 4 3 2 7 7 C 1.53792 * 87.07947 * 139.97796 * 6 4 3 8 8 H 1.08997 * 113.61187 * 220.01733 * 7 6 4 9 9 N 1.46496 * 113.60881 * 89.20113 * 7 6 4 10 10 C 1.34775 * 119.99753 * 155.00576 * 9 7 6 11 11 O 1.21555 * 120.00055 * 359.97438 * 10 9 7 12 12 C 1.47850 * 120.00341 * 179.97438 * 10 9 7 13 13 C 1.39552 * 120.13746 * 359.97438 * 12 10 9 14 14 C 1.38067 * 119.84071 * 180.02562 * 13 12 10 15 15 Br 1.89103 * 119.93611 * 179.97438 * 14 13 12 16 16 C 1.38422 * 120.12584 * 359.97438 * 14 13 12 17 17 C 1.38358 * 120.28497 * 0.02562 * 16 14 13 18 18 C 1.50700 * 119.92429 * 180.02562 * 17 16 14 19 19 O 1.42896 * 109.47221 * 119.99869 * 18 17 16 20 20 Si 1.86296 * 109.47041 * 359.97438 * 18 17 16 21 21 C 1.37946 * 120.15429 * 359.71175 * 17 16 14 22 22 C 1.53778 * 87.08002 * 334.56867 * 7 6 4 23 23 C 1.38256 * 120.00088 * 179.97438 * 3 2 1 24 24 C 1.38215 * 119.99734 * 0.02885 * 23 3 2 25 25 C 1.38253 * 120.00294 * 359.97438 * 24 23 3 26 26 C 1.38212 * 119.99859 * 359.97438 * 25 24 23 27 27 H 1.09001 * 109.47266 * 269.99835 * 1 2 3 28 28 H 1.08999 * 109.47130 * 29.99787 * 1 2 3 29 29 H 1.09004 * 109.47185 * 149.99795 * 1 2 3 30 30 H 1.09003 * 113.61636 * 254.52678 * 6 4 3 31 31 H 1.09004 * 113.61288 * 25.43569 * 6 4 3 32 32 H 0.97004 * 120.00284 * 334.99861 * 9 7 6 33 33 H 1.08004 * 120.07629 * 0.02562 * 13 12 10 34 34 H 1.08000 * 119.85815 * 179.97438 * 16 14 13 35 35 H 1.09008 * 109.46930 * 239.99826 * 18 17 16 36 36 H 0.96700 * 114.00091 * 299.99159 * 19 18 17 37 37 H 1.48498 * 109.99995 * 58.68312 * 20 18 17 38 38 H 1.48504 * 109.99957 * 180.02562 * 20 18 17 39 39 H 1.07996 * 120.06699 * 180.27710 * 21 17 16 40 40 H 1.09001 * 113.61469 * 270.88152 * 22 7 6 41 41 H 1.08995 * 113.61631 * 139.97675 * 22 7 6 42 42 H 1.07995 * 120.00047 * 180.29818 * 23 3 2 43 43 H 1.08000 * 119.99306 * 179.97438 * 24 23 3 44 44 H 1.08002 * 120.00364 * 180.02562 * 25 24 23 45 45 H 1.08000 * 119.99961 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4445 2.5021 0.0006 5 1 0.3796 2.3760 -0.1945 6 6 1.7466 3.3873 1.2212 7 6 1.7291 4.5858 0.2577 8 1 2.5038 5.3240 0.4650 9 7 0.4027 5.1848 0.0904 10 6 0.2881 6.4756 -0.2798 11 8 1.2853 7.1429 -0.4744 12 6 -1.0505 7.0801 -0.4492 13 6 -2.1973 6.3166 -0.2271 14 6 -3.4443 6.8871 -0.3876 15 35 -5.0001 5.8548 -0.0880 16 6 -3.5578 8.2134 -0.7674 17 6 -2.4243 8.9752 -0.9890 18 6 -2.5573 10.4184 -1.4017 19 8 -1.9249 11.2523 -0.4287 20 14 -4.3617 10.8653 -1.5247 21 6 -1.1726 8.4185 -0.8268 22 6 2.1046 3.5949 -0.8567 23 6 3.5807 1.1970 0.0005 24 6 4.2717 0.0000 0.0005 25 6 3.5805 -1.1973 0.0004 26 6 2.1983 -1.1973 0.0009 27 1 -0.3634 0.0000 1.0277 28 1 -0.3633 0.8900 -0.5138 29 1 -0.3634 -0.8900 -0.5139 30 1 0.9422 3.4064 1.9566 31 1 2.7238 3.1989 1.6660 32 1 -0.3931 4.6523 0.2460 33 1 -2.1095 5.2818 0.0697 34 1 -4.5354 8.6552 -0.8921 35 1 -2.0802 10.5647 -2.3708 36 1 -2.2993 11.1740 0.4594 37 1 -5.0310 10.6399 -0.2185 38 1 -4.5065 12.2862 -1.9316 39 1 -0.2888 9.0157 -0.9958 40 1 3.1796 3.4633 -0.9799 41 1 1.5893 3.7815 -1.7988 42 1 4.1206 2.1323 0.0054 43 1 5.3517 0.0001 0.0005 44 1 4.1204 -2.1326 0.0008 45 1 1.6583 -2.1326 0.0013 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:38 Heat of formation + Delta-G solvation = 16.000921 kcal Electronic energy + Delta-G solvation = -28205.964364 eV Core-core repulsion = 24201.743220 eV Total energy + Delta-G solvation = -4004.221143 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.062 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.92230 -41.13897 -40.00668 -38.74524 -37.83296 -34.87176 -33.82614 -33.67811 -33.01428 -31.50536 -30.52887 -27.96598 -27.14947 -26.81872 -26.52857 -25.13816 -23.07234 -22.87246 -21.89261 -21.66087 -20.20114 -19.25227 -18.03609 -17.90398 -17.46544 -17.28009 -16.79364 -16.48695 -16.37031 -16.11284 -15.93653 -15.70657 -15.25702 -15.05188 -14.99657 -14.91087 -14.39867 -14.28007 -14.24407 -14.02835 -13.67605 -13.54659 -13.34452 -13.28750 -13.05766 -12.87840 -12.76271 -12.33226 -12.11348 -12.02662 -11.86612 -11.79412 -11.59969 -11.51480 -11.24673 -11.13345 -10.77205 -10.39253 -10.15809 -9.97081 -9.67859 -9.44785 -5.08831 -0.55946 -0.23228 0.34949 0.42386 0.48128 1.10780 1.47030 1.53483 1.83176 1.91137 2.44356 2.78944 3.14272 3.23433 3.31416 3.38471 3.59108 3.61743 3.71255 3.78768 3.84820 3.90790 3.94462 3.99807 4.06854 4.15472 4.18213 4.20923 4.34294 4.45291 4.53183 4.56018 4.63902 4.66267 4.67801 4.72218 4.75852 4.84958 4.87125 4.90319 4.92494 5.01780 5.05460 5.15103 5.23335 5.32102 5.44913 5.60392 5.63666 5.75325 6.11132 6.26351 6.29929 7.04096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.078 4.078 5 H 0.101 0.899 6 C -0.134 4.134 7 C 0.119 3.881 8 H 0.108 0.892 9 N -0.708 5.708 10 C 0.564 3.436 11 O -0.524 6.524 12 C -0.127 4.127 13 C -0.054 4.054 14 C -0.094 4.094 15 Br -0.032 7.032 16 C -0.063 4.063 17 C -0.117 4.117 18 C -0.074 4.074 19 O -0.524 6.524 20 Si 0.679 3.321 21 C -0.017 4.017 22 C -0.143 4.143 23 C -0.113 4.113 24 C -0.123 4.123 25 C -0.119 4.119 26 C -0.119 4.119 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.066 0.934 30 H 0.077 0.923 31 H 0.100 0.900 32 H 0.400 0.600 33 H 0.138 0.862 34 H 0.142 0.858 35 H 0.126 0.874 36 H 0.378 0.622 37 H -0.255 1.255 38 H -0.250 1.250 39 H 0.149 0.851 40 H 0.097 0.903 41 H 0.075 0.925 42 H 0.123 0.877 43 H 0.121 0.879 44 H 0.121 0.879 45 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.078 -3.387 -0.178 4.580 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.096 4.096 5 H 0.119 0.881 6 C -0.172 4.172 7 C 0.014 3.986 8 H 0.126 0.874 9 N -0.359 5.359 10 C 0.351 3.649 11 O -0.400 6.400 12 C -0.131 4.131 13 C -0.074 4.074 14 C -0.174 4.174 15 Br 0.053 6.947 16 C -0.083 4.083 17 C -0.119 4.119 18 C -0.184 4.184 19 O -0.330 6.330 20 Si 0.580 3.420 21 C -0.036 4.036 22 C -0.182 4.182 23 C -0.131 4.131 24 C -0.141 4.141 25 C -0.137 4.137 26 C -0.137 4.137 27 H 0.090 0.910 28 H 0.087 0.913 29 H 0.085 0.915 30 H 0.095 0.905 31 H 0.118 0.882 32 H 0.236 0.764 33 H 0.156 0.844 34 H 0.160 0.840 35 H 0.144 0.856 36 H 0.225 0.775 37 H -0.180 1.180 38 H -0.175 1.175 39 H 0.167 0.833 40 H 0.115 0.885 41 H 0.094 0.906 42 H 0.140 0.860 43 H 0.139 0.861 44 H 0.139 0.861 45 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -3.224 -2.608 -0.414 4.168 hybrid contribution 0.496 -0.151 1.090 1.207 sum -2.728 -2.759 0.676 3.938 Atomic orbital electron populations 1.20875 0.91343 1.02873 1.02447 1.19784 0.96005 0.92656 0.99820 1.19493 0.93456 0.93702 1.00638 1.21689 0.99737 0.90933 0.97217 0.88078 1.23422 1.03704 0.93833 0.96262 1.21899 0.85225 0.94793 0.96721 0.87408 1.45570 1.08876 1.11433 1.70056 1.18094 0.88479 0.81614 0.76695 1.90830 1.38158 1.61385 1.49626 1.19946 0.92561 0.95259 1.05381 1.21281 0.90267 0.99801 0.96069 1.21639 0.92821 0.95389 1.07528 1.96849 1.32790 1.69720 1.95292 1.21221 0.99041 0.92295 0.95723 1.20325 0.92715 0.97135 1.01691 1.25057 1.11429 0.86506 0.95366 1.86645 1.60271 1.64505 1.21627 0.95089 0.75005 0.84690 0.87251 1.21303 0.98105 0.92876 0.91339 1.23571 1.02015 0.94531 0.98076 1.20995 0.93587 0.98186 1.00341 1.21150 0.99987 0.92505 1.00473 1.21170 0.94348 0.98209 1.00020 1.21058 0.94349 0.97509 1.00797 0.91047 0.91266 0.91466 0.90480 0.88203 0.76397 0.84431 0.84026 0.85622 0.77462 1.17973 1.17476 0.83332 0.88491 0.90647 0.85952 0.86051 0.86079 0.86094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.18 9.53 36.01 0.34 0.53 16 2 C -0.08 -0.04 5.88 -104.62 -0.62 -0.65 16 3 C -0.07 -0.01 5.29 -104.62 -0.55 -0.56 16 4 C -0.08 0.13 3.58 -90.96 -0.33 -0.19 16 5 H 0.10 -0.26 5.76 -51.93 -0.30 -0.56 16 6 C -0.13 0.28 7.29 -25.92 -0.19 0.09 16 7 C 0.12 -0.11 4.32 -67.12 -0.29 -0.40 16 8 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 9 N -0.71 0.80 5.22 -53.96 -0.28 0.51 16 10 C 0.56 0.89 7.77 -12.33 -0.10 0.80 16 11 O -0.52 -2.82 15.95 5.32 0.08 -2.74 16 12 C -0.13 -0.02 5.87 -104.97 -0.62 -0.64 16 13 C -0.05 0.08 9.28 -39.15 -0.36 -0.28 16 14 C -0.09 0.10 6.22 -39.58 -0.25 -0.14 16 15 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 16 C -0.06 0.09 8.41 -39.47 -0.33 -0.25 16 17 C -0.12 0.10 5.39 -104.68 -0.56 -0.46 16 18 C -0.07 0.09 2.82 36.01 0.10 0.19 16 19 O -0.52 -0.25 12.76 -35.23 -0.45 -0.70 16 20 Si 0.68 -1.24 29.78 -169.99 -5.06 -6.30 16 21 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 22 C -0.14 0.16 7.26 -25.92 -0.19 -0.03 16 23 C -0.11 -0.03 8.61 -39.58 -0.34 -0.37 16 24 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 25 C -0.12 -0.08 10.05 -39.59 -0.40 -0.48 16 26 C -0.12 -0.08 9.70 -39.58 -0.38 -0.47 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 28 H 0.07 -0.17 5.99 -51.93 -0.31 -0.48 16 29 H 0.07 -0.12 8.09 -51.93 -0.42 -0.54 16 30 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 31 H 0.10 -0.20 7.72 -51.93 -0.40 -0.60 16 32 H 0.40 -1.43 6.74 -40.82 -0.28 -1.70 16 33 H 0.14 -0.52 6.41 -52.48 -0.34 -0.86 16 34 H 0.14 -0.38 4.86 -52.49 -0.26 -0.64 16 35 H 0.13 -0.24 7.96 -51.92 -0.41 -0.66 16 36 H 0.38 -0.91 8.70 45.56 0.40 -0.51 16 37 H -0.26 0.01 7.11 56.52 0.40 0.41 16 38 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 39 H 0.15 0.23 7.65 -52.49 -0.40 -0.17 16 40 H 0.10 -0.12 6.32 -51.93 -0.33 -0.44 16 41 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 42 H 0.12 -0.14 6.67 -52.49 -0.35 -0.49 16 43 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 44 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 45 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 LS Contribution 386.97 15.07 5.83 5.83 Total: 0.00 -7.06 386.97 -13.50 -20.56 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -5.52 Total: -10.75 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -5.81 Total: -4.15 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -0.28 Total: 0.51 kcal Atomic # 8 Polarization: -3.07 SS G_CDS: -0.36 Total: -3.44 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.06 Total: -6.30 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -7.06 -13.50 -20.56 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.556 kcal (2) G-P(sol) polarization free energy of solvation -7.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.555 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.001 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds