Wall clock time and date at job start Tue Mar 9 2021 13:13:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38216 * 119.99729 * 2 1 4 4 C 1.50690 * 120.00286 * 359.97438 * 3 2 1 5 5 H 1.09000 * 112.90879 * 348.48002 * 4 3 2 6 6 C 1.53786 * 113.61518 * 119.72655 * 4 3 2 7 7 C 1.53781 * 87.17350 * 140.02616 * 6 4 3 8 8 H 1.08998 * 113.61196 * 219.97759 * 7 6 4 9 9 N 1.46505 * 113.61334 * 89.07333 * 7 6 4 10 10 C 1.34776 * 119.99597 * 154.99978 * 9 7 6 11 11 O 1.21571 * 120.00490 * 0.02562 * 10 9 7 12 12 C 1.47696 * 119.99804 * 180.02562 * 10 9 7 13 13 C 1.39805 * 120.15618 * 179.72215 * 12 10 9 14 14 F 1.35099 * 120.08375 * 359.97438 * 13 12 10 15 15 C 1.38312 * 119.83218 * 179.78792 * 13 12 10 16 16 C 1.38187 * 120.14271 * 0.47074 * 15 13 12 17 17 C 1.50702 * 119.84076 * 179.76527 * 16 15 13 18 18 O 1.42905 * 109.47123 * 255.02034 * 17 16 15 19 19 Si 1.86298 * 109.47249 * 15.01782 * 17 16 15 20 20 C 1.38650 * 120.31876 * 359.77998 * 16 15 13 21 21 F 1.35097 * 119.91873 * 179.97438 * 20 16 15 22 22 C 1.38074 * 120.16438 * 359.97438 * 20 16 15 23 23 C 1.53781 * 87.08070 * 334.52830 * 7 6 4 24 24 C 1.38258 * 119.99826 * 179.72520 * 3 2 1 25 25 C 1.38213 * 119.99937 * 0.27370 * 24 3 2 26 26 C 1.38257 * 120.00286 * 359.97438 * 25 24 3 27 27 C 1.38209 * 119.99591 * 359.95192 * 26 25 24 28 28 H 1.09000 * 109.47004 * 90.00411 * 1 2 3 29 29 H 1.09002 * 109.46753 * 210.00095 * 1 2 3 30 30 H 1.08996 * 109.47036 * 330.00487 * 1 2 3 31 31 H 1.09002 * 113.61357 * 25.43533 * 6 4 3 32 32 H 1.09002 * 113.61608 * 254.61695 * 6 4 3 33 33 H 0.96995 * 120.00170 * 335.00476 * 9 7 6 34 34 H 1.07997 * 119.92665 * 180.23038 * 15 13 12 35 35 H 1.09002 * 109.47342 * 135.01688 * 17 16 15 36 36 H 0.96704 * 113.99522 * 59.99666 * 18 17 16 37 37 H 1.48498 * 110.00225 * 180.02562 * 19 17 16 38 38 H 1.48501 * 110.00118 * 301.32049 * 19 17 16 39 39 H 1.07997 * 120.07578 * 179.97438 * 22 20 16 40 40 H 1.09005 * 113.61471 * 139.98321 * 23 7 6 41 41 H 1.08996 * 113.61178 * 270.79663 * 23 7 6 42 42 H 1.08003 * 120.00265 * 180.25531 * 24 3 2 43 43 H 1.08000 * 120.00018 * 179.97438 * 25 24 3 44 44 H 1.08004 * 120.00149 * 179.97438 * 26 25 24 45 45 H 1.08005 * 119.99674 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4446 2.5020 -0.0006 5 1 0.3805 2.3775 -0.2015 6 6 1.7412 3.3852 1.2230 7 6 1.7273 4.5870 0.2636 8 1 2.5004 5.3250 0.4772 9 7 0.4008 5.1843 0.0904 10 6 0.2862 6.4762 -0.2759 11 8 1.2835 7.1458 -0.4630 12 6 -1.0510 7.0786 -0.4500 13 6 -1.1738 8.4200 -0.8242 14 9 -0.0688 9.1702 -1.0274 15 6 -2.4293 8.9761 -0.9896 16 6 -3.5605 8.2115 -0.7763 17 6 -4.9252 8.8258 -0.9534 18 8 -5.5074 9.0704 0.3286 19 14 -4.7669 10.4339 -1.8804 20 6 -3.4459 6.8820 -0.4000 21 9 -4.5571 6.1421 -0.1931 22 6 -2.1989 6.3123 -0.2361 23 6 2.1090 3.6002 -0.8524 24 6 3.5806 1.1970 0.0057 25 6 4.2717 0.0001 0.0058 26 6 3.5805 -1.1973 0.0006 27 6 2.1984 -1.1973 -0.0036 28 1 -0.3633 -0.0001 -1.0277 29 1 -0.3633 -0.8900 0.5139 30 1 -0.3633 0.8900 0.5137 31 1 2.7163 3.1961 1.6719 32 1 0.9341 3.4018 1.9554 33 1 -0.3949 4.6500 0.2394 34 1 -2.5259 10.0112 -1.2823 35 1 -5.5608 8.1427 -1.5168 36 1 -4.9939 9.6714 0.8855 37 1 -6.1059 11.0501 -2.0610 38 1 -3.8769 11.3626 -1.1383 39 1 -2.1113 5.2767 0.0575 40 1 1.5980 3.7898 -1.7965 41 1 3.1847 3.4711 -0.9719 42 1 4.1206 2.1324 0.0099 43 1 5.3517 0.0001 0.0098 44 1 4.1206 -2.1326 0.0002 45 1 1.6585 -2.1326 -0.0073 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:48 Heat of formation + Delta-G solvation = -66.145514 kcal Electronic energy + Delta-G solvation = -31305.369202 eV Core-core repulsion = 26698.495974 eV Total energy + Delta-G solvation = -4606.873228 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.132 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -50.11523 -50.09495 -41.83196 -40.88655 -39.94999 -38.77548 -37.76172 -34.94329 -33.77021 -33.17201 -31.51923 -31.38439 -28.11444 -27.70938 -26.71080 -26.08303 -24.41682 -24.09385 -22.96836 -22.02603 -21.86044 -20.19593 -19.72763 -18.86378 -18.54380 -18.02512 -17.68047 -17.32888 -16.99025 -16.85534 -16.60567 -16.44687 -16.22382 -16.06790 -15.89805 -15.80823 -15.63731 -15.31295 -14.99044 -14.83301 -14.79161 -14.38557 -14.14980 -13.96023 -13.82303 -13.61971 -13.42324 -13.20447 -13.12386 -12.99855 -12.81219 -12.72459 -12.41709 -12.05629 -11.93222 -11.72709 -11.54282 -11.26429 -11.17722 -10.78848 -10.61240 -10.21249 -9.83017 -9.66554 -9.40933 -4.96095 -0.82426 -0.31430 0.43876 0.49302 1.15736 1.36662 1.53893 1.79503 1.91281 2.22121 2.78119 2.80553 2.83725 3.09916 3.24003 3.41945 3.46630 3.50106 3.67816 3.71718 3.78447 3.92576 4.03047 4.07611 4.15686 4.20698 4.26035 4.31448 4.37944 4.44452 4.51836 4.58876 4.63774 4.68675 4.72092 4.75958 4.81807 4.82171 4.85269 4.94312 5.00237 5.01695 5.11526 5.20579 5.33784 5.37236 5.46799 5.64127 5.65194 5.78633 6.15415 6.29022 6.38610 6.97270 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.094 4.094 3 C -0.080 4.080 4 C -0.069 4.069 5 H 0.116 0.884 6 C -0.124 4.124 7 C 0.116 3.884 8 H 0.089 0.911 9 N -0.689 5.689 10 C 0.561 3.439 11 O -0.559 6.559 12 C -0.147 4.147 13 C 0.140 3.860 14 F -0.125 7.125 15 C -0.130 4.130 16 C -0.090 4.090 17 C -0.087 4.087 18 O -0.540 6.540 19 Si 0.772 3.228 20 C 0.105 3.895 21 F -0.127 7.127 22 C -0.076 4.076 23 C -0.142 4.142 24 C -0.123 4.123 25 C -0.138 4.138 26 C -0.133 4.133 27 C -0.135 4.135 28 H 0.075 0.925 29 H 0.069 0.931 30 H 0.081 0.919 31 H 0.099 0.901 32 H 0.090 0.910 33 H 0.416 0.584 34 H 0.171 0.829 35 H 0.133 0.867 36 H 0.390 0.610 37 H -0.294 1.294 38 H -0.271 1.271 39 H 0.181 0.819 40 H 0.069 0.931 41 H 0.095 0.905 42 H 0.132 0.868 43 H 0.131 0.869 44 H 0.130 0.870 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.403 -3.169 -0.641 4.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.094 4.094 3 C -0.080 4.080 4 C -0.087 4.087 5 H 0.134 0.866 6 C -0.162 4.162 7 C 0.011 3.989 8 H 0.107 0.893 9 N -0.341 5.341 10 C 0.348 3.652 11 O -0.438 6.438 12 C -0.151 4.151 13 C 0.119 3.881 14 F -0.103 7.103 15 C -0.149 4.149 16 C -0.092 4.092 17 C -0.195 4.195 18 O -0.348 6.348 19 Si 0.675 3.325 20 C 0.085 3.915 21 F -0.105 7.105 22 C -0.095 4.095 23 C -0.180 4.180 24 C -0.141 4.141 25 C -0.156 4.156 26 C -0.151 4.151 27 C -0.153 4.153 28 H 0.093 0.907 29 H 0.088 0.912 30 H 0.100 0.900 31 H 0.117 0.883 32 H 0.108 0.892 33 H 0.255 0.745 34 H 0.188 0.812 35 H 0.151 0.849 36 H 0.240 0.760 37 H -0.222 1.222 38 H -0.197 1.197 39 H 0.198 0.802 40 H 0.088 0.912 41 H 0.114 0.886 42 H 0.150 0.850 43 H 0.149 0.851 44 H 0.148 0.852 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -2.262 -2.268 -0.965 3.345 hybrid contribution 0.039 -0.265 1.215 1.244 sum -2.223 -2.533 0.250 3.380 Atomic orbital electron populations 1.20901 0.89946 1.03688 1.02935 1.20097 0.97206 0.92622 0.99500 1.19699 0.93547 0.94370 1.00414 1.21708 1.00148 0.89816 0.97010 0.86645 1.23369 1.04277 0.92405 0.96167 1.21887 0.84745 0.94654 0.97630 0.89255 1.45409 1.09661 1.10304 1.68739 1.18061 0.87915 0.82430 0.76808 1.90874 1.39290 1.62332 1.51345 1.19793 0.94015 0.93530 1.07767 1.17800 0.83280 0.88393 0.98578 1.91605 1.51657 1.75381 1.91629 1.21101 0.88936 1.02423 1.02399 1.20443 0.96884 0.92839 0.99001 1.25297 0.91565 1.11693 0.90931 1.86658 1.51874 1.69504 1.26763 0.93841 0.78845 0.72985 0.86820 1.17333 0.82816 0.89270 1.02065 1.91575 1.50659 1.76048 1.92239 1.21343 0.88509 1.01924 0.97765 1.23592 1.02039 0.94603 0.97771 1.21215 0.94062 0.98549 1.00285 1.21383 1.00717 0.92735 1.00751 1.21401 0.94727 0.98777 1.00221 1.21307 0.94594 0.98267 1.01094 0.90654 0.91159 0.90017 0.88258 0.89172 0.74543 0.81203 0.84911 0.76023 1.22178 1.19707 0.80169 0.91185 0.88624 0.85049 0.85124 0.85157 0.85191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.54 9.32 71.24 0.66 1.21 16 2 C -0.09 -0.01 5.88 -19.86 -0.12 -0.13 16 3 C -0.08 0.04 5.29 -19.87 -0.11 -0.07 16 4 C -0.07 0.33 3.41 -10.92 -0.04 0.29 16 5 H 0.12 -0.90 6.09 -2.39 -0.01 -0.92 16 6 C -0.12 0.68 7.28 31.12 0.23 0.91 16 7 C 0.12 -0.25 4.32 45.52 0.20 -0.06 16 8 H 0.09 0.21 7.47 -2.39 -0.02 0.19 16 9 N -0.69 2.32 5.21 -443.04 -2.31 0.01 16 10 C 0.56 2.02 7.77 86.74 0.67 2.69 16 11 O -0.56 -7.25 14.94 -3.94 -0.06 -7.31 16 12 C -0.15 0.00 5.88 -20.06 -0.12 -0.12 16 13 C 0.14 0.30 7.28 22.67 0.17 0.46 16 14 F -0.12 -1.03 15.55 44.97 0.70 -0.33 16 15 C -0.13 0.38 8.62 22.28 0.19 0.57 16 16 C -0.09 0.32 5.27 -19.78 -0.10 0.21 16 17 C -0.09 0.33 2.44 71.24 0.17 0.51 16 18 O -0.54 0.29 12.88 -148.98 -1.92 -1.63 16 19 Si 0.77 -4.04 30.24 68.60 2.07 -1.96 16 20 C 0.10 -0.31 7.23 22.33 0.16 -0.15 16 21 F -0.13 0.03 16.73 44.97 0.75 0.79 16 22 C -0.08 0.41 9.52 22.57 0.21 0.62 16 23 C -0.14 0.37 7.26 31.21 0.23 0.60 16 24 C -0.12 -0.06 8.62 22.27 0.19 0.13 16 25 C -0.14 -0.19 10.05 22.27 0.22 0.03 16 26 C -0.13 -0.21 10.05 22.27 0.22 0.01 16 27 C -0.13 -0.17 9.70 22.27 0.22 0.04 16 28 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 29 H 0.07 -0.35 8.09 -2.39 -0.02 -0.37 16 30 H 0.08 -0.61 6.34 -2.39 -0.02 -0.62 16 31 H 0.10 -0.47 7.72 -2.39 -0.02 -0.49 16 32 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 33 H 0.42 -4.17 6.73 -92.71 -0.62 -4.80 16 34 H 0.17 -0.99 4.83 -2.91 -0.01 -1.01 16 35 H 0.13 -0.66 7.89 -2.39 -0.02 -0.68 16 36 H 0.39 -2.66 8.70 -74.05 -0.64 -3.30 16 37 H -0.29 -0.75 7.11 99.48 0.71 -0.04 16 38 H -0.27 0.66 6.68 99.48 0.66 1.33 16 39 H 0.18 -2.20 6.40 -2.91 -0.02 -2.22 16 40 H 0.07 -0.09 8.14 -2.38 -0.02 -0.10 16 41 H 0.10 -0.22 6.33 -2.39 -0.02 -0.23 16 42 H 0.13 -0.29 6.66 -2.91 -0.02 -0.31 16 43 H 0.13 -0.20 8.06 -2.91 -0.02 -0.23 16 44 H 0.13 -0.18 8.06 -2.91 -0.02 -0.21 16 45 H 0.13 -0.21 8.06 -2.91 -0.02 -0.23 16 Total: 0.00 -20.36 376.39 2.31 -18.05 By element: Atomic # 1 Polarization: -15.17 SS G_CDS: -0.20 Total: -15.37 kcal Atomic # 6 Polarization: 4.49 SS G_CDS: 3.27 Total: 7.76 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -2.31 Total: 0.01 kcal Atomic # 8 Polarization: -6.96 SS G_CDS: -1.98 Total: -8.93 kcal Atomic # 9 Polarization: -1.00 SS G_CDS: 1.45 Total: 0.45 kcal Atomic # 14 Polarization: -4.04 SS G_CDS: 2.07 Total: -1.96 kcal Total: -20.36 2.31 -18.05 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.100 kcal (2) G-P(sol) polarization free energy of solvation -20.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.146 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds