Wall clock time and date at job start Tue Mar 9 2021 13:13:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38209 * 120.00059 * 2 1 4 4 C 1.50702 * 119.99933 * 359.97438 * 3 2 1 5 5 H 1.08996 * 112.85117 * 11.19494 * 4 3 2 6 6 C 1.53783 * 113.61414 * 142.50484 * 4 3 2 7 7 C 1.53774 * 87.08075 * 139.97987 * 6 4 3 8 8 H 1.09004 * 113.68980 * 220.00219 * 7 6 4 9 9 N 1.46503 * 113.61430 * 89.11564 * 7 6 4 10 10 C 1.34778 * 119.99637 * 107.50227 * 9 7 6 11 11 O 1.21567 * 120.00497 * 359.97438 * 10 9 7 12 12 C 1.47725 * 119.99447 * 180.02562 * 10 9 7 13 13 C 1.39634 * 120.11507 * 180.02562 * 12 10 9 14 14 C 1.37861 * 119.87613 * 179.97438 * 13 12 10 15 15 C 1.50709 * 119.93857 * 179.97438 * 14 13 12 16 16 O 1.42902 * 109.46723 * 254.97909 * 15 14 13 17 17 Si 1.86295 * 109.47202 * 134.97603 * 15 14 13 18 18 C 1.38628 * 120.11975 * 359.96969 * 14 13 12 19 19 F 1.35100 * 119.87710 * 180.27862 * 18 14 13 20 20 C 1.38675 * 120.24072 * 0.02562 * 18 14 13 21 21 C 1.37813 * 120.11677 * 0.02562 * 20 18 14 22 22 C 1.53783 * 87.08457 * 334.56582 * 7 6 4 23 23 C 1.38257 * 120.00133 * 180.25425 * 3 2 1 24 24 C 1.38216 * 119.99914 * 359.53360 * 23 3 2 25 25 C 1.38260 * 120.00080 * 0.42323 * 24 23 3 26 26 C 1.38221 * 119.99710 * 359.80971 * 25 24 23 27 27 H 1.09008 * 109.46934 * 90.00149 * 1 2 3 28 28 H 1.09001 * 109.47423 * 209.99922 * 1 2 3 29 29 H 1.08994 * 109.47214 * 329.99982 * 1 2 3 30 30 H 1.09002 * 113.61623 * 25.42599 * 6 4 3 31 31 H 1.09004 * 113.61471 * 254.53300 * 6 4 3 32 32 H 0.96998 * 120.00047 * 287.49999 * 9 7 6 33 33 H 1.08003 * 120.06129 * 359.94862 * 13 12 10 34 34 H 1.09003 * 109.46507 * 14.97054 * 15 14 13 35 35 H 0.96705 * 113.99710 * 180.02562 * 16 15 14 36 36 H 1.48504 * 109.99695 * 298.68029 * 17 15 14 37 37 H 1.48500 * 109.99880 * 59.99840 * 17 15 14 38 38 H 1.08006 * 119.93830 * 179.97438 * 20 18 14 39 39 H 1.08000 * 120.05620 * 179.97438 * 21 20 18 40 40 H 1.09000 * 113.61149 * 139.98233 * 22 7 6 41 41 H 1.09000 * 113.60991 * 270.88624 * 22 7 6 42 42 H 1.07996 * 120.00183 * 179.72581 * 23 3 2 43 43 H 1.07996 * 120.00592 * 180.20716 * 24 23 3 44 44 H 1.07990 * 120.00582 * 179.78747 * 25 24 23 45 45 H 1.07991 * 119.99904 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4446 2.5020 -0.0006 5 1 0.3795 2.3760 0.1940 6 6 2.1044 3.5947 0.8571 7 6 1.7293 4.5857 -0.2572 8 1 2.5032 5.3247 -0.4649 9 7 0.4024 5.1836 -0.0888 10 6 0.2870 6.4743 0.2817 11 8 1.2838 7.1423 0.4764 12 6 -1.0509 7.0769 0.4521 13 6 -1.1734 8.4140 0.8352 14 6 -2.4244 8.9715 0.9923 15 6 -2.5583 10.4144 1.4064 16 8 -2.9514 10.4816 2.7787 17 14 -3.8471 11.2468 0.3496 18 6 -3.5595 8.2074 0.7700 19 9 -4.7830 8.7602 0.9199 20 6 -3.4436 6.8790 0.3892 21 6 -2.1978 6.3114 0.2303 22 6 1.7472 3.3875 -1.2210 23 6 3.5806 1.1969 -0.0053 24 6 4.2717 0.0000 -0.0009 25 6 3.5805 -1.1974 0.0000 26 6 2.1983 -1.1974 0.0005 27 1 -0.3633 0.0000 -1.0278 28 1 -0.3634 -0.8900 0.5138 29 1 -0.3633 0.8899 0.5138 30 1 3.1793 3.4630 0.9808 31 1 1.5887 3.7812 1.7992 32 1 -0.3930 4.6505 -0.2438 33 1 -0.2897 9.0103 1.0086 34 1 -1.6010 10.9196 1.2776 35 1 -3.0573 11.3825 3.1138 36 1 -3.4345 11.2116 -1.0765 37 1 -5.1569 10.5672 0.5164 38 1 -4.3311 6.2880 0.2177 39 1 -2.1087 5.2766 -0.0658 40 1 0.9431 3.4068 -1.9566 41 1 2.7245 3.1993 -1.6654 42 1 4.1206 2.1322 -0.0098 43 1 5.3517 -0.0001 -0.0016 44 1 4.1204 -2.1327 0.0000 45 1 1.6583 -2.1326 0.0008 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:56 Heat of formation + Delta-G solvation = -17.555961 kcal Electronic energy + Delta-G solvation = -28587.358222 eV Core-core repulsion = 24452.045970 eV Total energy + Delta-G solvation = -4135.312252 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.142 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.57321 -41.88626 -40.96615 -39.77923 -38.70724 -37.63536 -34.91321 -33.76118 -33.04284 -32.20856 -31.34621 -27.87769 -27.06288 -26.72367 -26.38245 -24.98085 -23.48899 -23.01783 -21.87528 -21.63417 -20.18244 -19.06608 -18.97419 -18.52689 -18.01188 -17.69544 -17.14971 -16.90177 -16.60960 -16.22108 -16.20100 -15.86660 -15.44801 -15.22245 -15.09243 -15.03894 -14.88765 -14.79928 -14.36223 -14.22582 -13.97397 -13.90659 -13.77193 -13.48026 -13.44106 -13.18067 -12.86410 -12.83118 -12.71780 -12.34983 -12.05539 -11.73543 -11.58723 -11.52929 -11.26039 -11.18338 -10.66628 -10.32709 -10.18515 -9.92226 -9.67623 -9.42721 -4.98220 -0.64508 -0.12002 0.42817 0.47870 1.21304 1.45805 1.61942 1.87952 1.94503 2.41999 2.79710 2.87139 3.16014 3.42083 3.44307 3.47707 3.66974 3.70680 3.74371 3.86940 3.93039 4.00712 4.01236 4.06135 4.17169 4.20939 4.24533 4.41537 4.52590 4.58213 4.61000 4.63119 4.74384 4.76464 4.78890 4.81313 4.85307 4.86338 4.93076 4.95538 4.99398 5.00677 5.11841 5.18897 5.33101 5.43359 5.49136 5.62672 5.63866 5.78119 6.14169 6.34664 6.80777 7.01633 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.095 4.095 3 C -0.081 4.081 4 C -0.069 4.069 5 H 0.116 0.884 6 C -0.143 4.143 7 C 0.116 3.884 8 H 0.089 0.911 9 N -0.691 5.691 10 C 0.565 3.435 11 O -0.572 6.572 12 C -0.154 4.154 13 C -0.024 4.024 14 C -0.137 4.137 15 C -0.079 4.079 16 O -0.561 6.561 17 Si 0.757 3.243 18 C 0.101 3.899 19 F -0.126 7.126 20 C -0.153 4.153 21 C -0.038 4.038 22 C -0.123 4.123 23 C -0.124 4.124 24 C -0.138 4.138 25 C -0.133 4.133 26 C -0.135 4.135 27 H 0.078 0.922 28 H 0.068 0.932 29 H 0.079 0.921 30 H 0.095 0.905 31 H 0.067 0.933 32 H 0.416 0.584 33 H 0.145 0.855 34 H 0.097 0.903 35 H 0.406 0.594 36 H -0.303 1.303 37 H -0.265 1.265 38 H 0.173 0.827 39 H 0.180 0.820 40 H 0.090 0.910 41 H 0.099 0.901 42 H 0.131 0.869 43 H 0.131 0.869 44 H 0.131 0.869 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.151 -1.607 -1.427 3.040 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.095 4.095 3 C -0.081 4.081 4 C -0.087 4.087 5 H 0.134 0.866 6 C -0.182 4.182 7 C 0.011 3.989 8 H 0.107 0.893 9 N -0.343 5.343 10 C 0.353 3.647 11 O -0.452 6.452 12 C -0.157 4.157 13 C -0.043 4.043 14 C -0.138 4.138 15 C -0.188 4.188 16 O -0.372 6.372 17 Si 0.662 3.338 18 C 0.081 3.919 19 F -0.104 7.104 20 C -0.171 4.171 21 C -0.057 4.057 22 C -0.161 4.161 23 C -0.141 4.141 24 C -0.156 4.156 25 C -0.151 4.151 26 C -0.153 4.153 27 H 0.097 0.903 28 H 0.087 0.913 29 H 0.098 0.902 30 H 0.113 0.887 31 H 0.086 0.914 32 H 0.255 0.745 33 H 0.163 0.837 34 H 0.114 0.886 35 H 0.257 0.743 36 H -0.230 1.230 37 H -0.192 1.192 38 H 0.190 0.810 39 H 0.197 0.803 40 H 0.109 0.891 41 H 0.117 0.883 42 H 0.149 0.851 43 H 0.149 0.851 44 H 0.149 0.851 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -2.033 -1.858 -1.990 3.398 hybrid contribution 0.154 -0.637 0.117 0.666 sum -1.880 -2.495 -1.873 3.642 Atomic orbital electron populations 1.20914 0.89939 1.03519 1.03083 1.20094 0.97228 0.92619 0.99520 1.19704 0.93557 0.94407 1.00422 1.21695 1.00208 0.89805 0.97013 0.86571 1.23559 1.02039 0.94841 0.97752 1.21883 0.84906 0.94628 0.97516 0.89306 1.45423 1.09535 1.10603 1.68736 1.18230 0.88263 0.82120 0.76049 1.90796 1.39732 1.62609 1.52074 1.20006 0.93475 0.95203 1.07003 1.21095 0.96452 0.94115 0.92628 1.19593 0.92406 0.96603 1.05173 1.24755 1.08827 0.94522 0.90716 1.86446 1.91572 1.35491 1.23679 0.95004 0.76713 0.86519 0.75595 1.18342 0.79603 0.93702 1.00207 1.91481 1.41794 1.84058 1.93095 1.21464 1.00886 0.92609 1.02176 1.21551 0.89430 1.01052 0.93645 1.23359 1.04221 0.92379 0.96131 1.21213 0.94066 0.98553 1.00304 1.21385 1.00723 0.92727 1.00741 1.21405 0.94730 0.98779 1.00211 1.21310 0.94595 0.98260 1.01086 0.90294 0.91298 0.90185 0.88669 0.91389 0.74531 0.83691 0.88554 0.74279 1.23037 1.19153 0.80973 0.80292 0.89120 0.88297 0.85074 0.85105 0.85132 0.85168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.54 9.53 71.24 0.68 1.22 16 2 C -0.09 -0.03 5.88 -19.87 -0.12 -0.15 16 3 C -0.08 0.02 5.29 -19.87 -0.11 -0.09 16 4 C -0.07 0.31 3.58 -11.01 -0.04 0.27 16 5 H 0.12 -0.89 5.76 -2.39 -0.01 -0.90 16 6 C -0.14 0.30 7.25 31.12 0.23 0.52 16 7 C 0.12 -0.21 4.32 45.52 0.20 -0.02 16 8 H 0.09 0.23 7.46 -2.38 -0.02 0.22 16 9 N -0.69 2.02 5.21 -443.01 -2.31 -0.29 16 10 C 0.57 2.32 7.77 86.75 0.67 3.00 16 11 O -0.57 -7.28 15.94 -3.93 -0.06 -7.34 16 12 C -0.15 -0.29 5.87 -20.09 -0.12 -0.41 16 13 C -0.02 -0.12 9.21 22.52 0.21 0.09 16 14 C -0.14 -0.71 4.80 -19.86 -0.10 -0.81 16 15 C -0.08 -0.12 2.80 71.24 0.20 0.08 16 16 O -0.56 -1.00 12.86 -148.98 -1.92 -2.92 16 17 Si 0.76 0.39 30.77 68.60 2.11 2.50 16 18 C 0.10 0.51 6.68 22.47 0.15 0.66 16 19 F -0.13 -1.04 12.82 44.97 0.58 -0.47 16 20 C -0.15 0.21 10.01 22.27 0.22 0.43 16 21 C -0.04 0.16 9.54 22.51 0.21 0.37 16 22 C -0.12 0.65 7.29 31.12 0.23 0.88 16 23 C -0.12 -0.09 8.60 22.27 0.19 0.10 16 24 C -0.14 -0.21 10.05 22.27 0.22 0.01 16 25 C -0.13 -0.23 10.05 22.27 0.22 -0.01 16 26 C -0.13 -0.19 9.70 22.27 0.22 0.03 16 27 H 0.08 -0.47 8.14 -2.38 -0.02 -0.49 16 28 H 0.07 -0.33 8.09 -2.39 -0.02 -0.35 16 29 H 0.08 -0.56 5.99 -2.39 -0.01 -0.57 16 30 H 0.09 -0.17 6.32 -2.39 -0.02 -0.18 16 31 H 0.07 -0.02 8.14 -2.38 -0.02 -0.04 16 32 H 0.42 -4.07 6.73 -92.71 -0.62 -4.69 16 33 H 0.15 0.74 7.58 -2.91 -0.02 0.72 16 34 H 0.10 -0.23 7.77 -2.39 -0.02 -0.25 16 35 H 0.41 -3.58 8.74 -74.05 -0.65 -4.23 16 36 H -0.30 -2.14 7.11 99.48 0.71 -1.44 16 37 H -0.26 -1.87 5.33 99.48 0.53 -1.34 16 38 H 0.17 -1.16 8.06 -2.91 -0.02 -1.18 16 39 H 0.18 -2.33 6.40 -2.91 -0.02 -2.34 16 40 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 41 H 0.10 -0.45 7.71 -2.39 -0.02 -0.47 16 42 H 0.13 -0.25 6.68 -2.91 -0.02 -0.27 16 43 H 0.13 -0.19 8.06 -2.91 -0.02 -0.21 16 44 H 0.13 -0.17 8.06 -2.92 -0.02 -0.19 16 45 H 0.13 -0.20 8.06 -2.92 -0.02 -0.22 16 Total: 0.00 -22.88 370.13 1.41 -21.47 By element: Atomic # 1 Polarization: -18.77 SS G_CDS: -0.36 Total: -19.13 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: 3.38 Total: 6.18 kcal Atomic # 7 Polarization: 2.02 SS G_CDS: -2.31 Total: -0.29 kcal Atomic # 8 Polarization: -8.28 SS G_CDS: -1.98 Total: -10.26 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 0.58 Total: -0.47 kcal Atomic # 14 Polarization: 0.39 SS G_CDS: 2.11 Total: 2.50 kcal Total: -22.88 1.41 -21.47 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.915 kcal (2) G-P(sol) polarization free energy of solvation -22.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.969 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.413 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.471 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds