Wall clock time and date at job start Tue Mar 9 2021 13:14:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38220 * 119.99928 * 2 1 4 4 C 1.50698 * 119.99873 * 359.97438 * 3 2 1 5 5 H 1.09004 * 112.84985 * 348.77768 * 4 3 2 6 6 C 1.53780 * 113.61848 * 119.97175 * 4 3 2 7 7 C 1.53778 * 87.08017 * 139.97724 * 6 4 3 8 8 H 1.09001 * 113.61486 * 220.01559 * 7 6 4 9 9 N 1.46506 * 113.61172 * 89.12143 * 7 6 4 10 10 C 1.34779 * 119.99868 * 154.99601 * 9 7 6 11 11 O 1.21574 * 119.99908 * 0.02562 * 10 9 7 12 12 C 1.47662 * 119.99880 * 179.97438 * 10 9 7 13 13 C 1.40011 * 120.45158 * 354.04414 * 12 10 9 14 14 N 1.31309 * 121.37242 * 180.02562 * 13 12 10 15 15 C 1.32820 * 121.89385 * 359.97438 * 14 13 12 16 16 N 1.37160 * 132.96537 * 180.02562 * 15 14 13 17 17 C 1.36942 * 110.11322 * 179.97438 * 16 15 14 18 18 C 1.34184 * 109.95370 * 359.97438 * 17 16 15 19 19 C 1.50697 * 126.60001 * 179.97438 * 18 17 16 20 20 O 1.42894 * 109.47188 * 255.02399 * 19 18 17 21 21 Si 1.86300 * 109.47110 * 15.02601 * 19 18 17 22 22 C 1.41014 * 120.08109 * 359.97438 * 15 14 13 23 23 C 1.39287 * 119.62297 * 359.74824 * 22 15 14 24 24 C 1.50702 * 121.03340 * 180.25019 * 23 22 15 25 25 C 1.53775 * 87.08386 * 334.57259 * 7 6 4 26 26 C 1.38250 * 119.99897 * 179.97438 * 3 2 1 27 27 C 1.38216 * 120.00274 * 0.02562 * 26 3 2 28 28 C 1.38254 * 119.99809 * 0.08438 * 27 26 3 29 29 C 1.38216 * 120.00293 * 359.84955 * 28 27 26 30 30 H 1.08997 * 109.47496 * 89.99375 * 1 2 3 31 31 H 1.09001 * 109.47168 * 209.99484 * 1 2 3 32 32 H 1.09002 * 109.46976 * 329.99094 * 1 2 3 33 33 H 1.08992 * 113.61784 * 254.52802 * 6 4 3 34 34 H 1.09004 * 113.60691 * 25.34847 * 6 4 3 35 35 H 0.96995 * 119.99829 * 334.99919 * 9 7 6 36 36 H 1.07999 * 119.31480 * 0.02562 * 13 12 10 37 37 H 0.97003 * 124.94220 * 359.97438 * 16 15 14 38 38 H 1.07996 * 125.02774 * 180.02562 * 17 16 15 39 39 H 1.09000 * 109.47078 * 135.02464 * 19 18 17 40 40 H 0.96698 * 114.00546 * 179.97438 * 20 19 18 41 41 H 1.48502 * 109.99586 * 178.68164 * 21 19 18 42 42 H 1.48503 * 109.99800 * 299.99888 * 21 19 18 43 43 H 1.09000 * 109.47246 * 263.98902 * 24 23 22 44 44 H 1.09000 * 109.47078 * 23.98875 * 24 23 22 45 45 H 1.08996 * 109.46489 * 143.98688 * 24 23 22 46 46 H 1.09005 * 113.61223 * 270.88342 * 25 7 6 47 47 H 1.08999 * 113.61496 * 139.97981 * 25 7 6 48 48 H 1.08004 * 119.99843 * 179.72258 * 26 3 2 49 49 H 1.07998 * 120.00331 * 179.97438 * 27 26 3 50 50 H 1.07999 * 120.00193 * 179.97438 * 28 27 26 51 51 H 1.07997 * 120.00484 * 180.11234 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4445 2.5021 -0.0006 5 1 0.3797 2.3759 -0.1965 6 6 1.7456 3.3879 1.2199 7 6 1.7289 4.5859 0.2559 8 1 2.5034 5.3242 0.4634 9 7 0.4022 5.1836 0.0857 10 6 0.2871 6.4743 -0.2852 11 8 1.2843 7.1423 -0.4789 12 6 -1.0500 7.0766 -0.4573 13 6 -2.2020 6.2868 -0.3597 14 7 -3.3998 6.8034 -0.5101 15 6 -3.5805 8.0952 -0.7607 16 7 -4.7011 8.8621 -0.9542 17 6 -4.3464 10.1649 -1.1827 18 6 -3.0108 10.2890 -1.1462 19 6 -2.2203 11.5559 -1.3490 20 8 -1.6172 11.5388 -2.6443 21 14 -3.3570 13.0257 -1.2126 22 6 -2.4690 8.9558 -0.8723 23 6 -1.1833 8.4440 -0.7130 24 6 0.0267 9.3360 -0.8201 25 6 2.1053 3.5945 -0.8578 26 6 3.5806 1.1970 0.0005 27 6 4.2717 0.0001 0.0005 28 6 3.5805 -1.1973 -0.0018 29 6 2.1983 -1.1973 -0.0009 30 1 -0.3634 0.0001 -1.0276 31 1 -0.3633 -0.8900 0.5138 32 1 -0.3633 0.8899 0.5140 33 1 0.9407 3.4073 1.9545 34 1 2.7218 3.1987 1.6664 35 1 -0.3933 4.6506 0.2399 36 1 -2.1033 5.2307 -0.1565 37 1 -5.6122 8.5299 -0.9323 38 1 -5.0392 10.9731 -1.3645 39 1 -1.4436 11.6254 -0.5874 40 1 -1.0918 12.3257 -2.8441 41 1 -2.5840 14.2826 -1.3791 42 1 -4.4206 12.9428 -2.2456 43 1 0.4319 9.2788 -1.8303 44 1 -0.2597 10.3646 -0.6012 45 1 0.7828 9.0096 -0.1062 46 1 3.1804 3.4628 -0.9801 47 1 1.5907 3.7807 -1.8004 48 1 4.1206 2.1324 -0.0040 49 1 5.3517 0.0000 0.0005 50 1 4.1204 -2.1326 -0.0022 51 1 1.6583 -2.1326 -0.0009 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:15 Heat of formation + Delta-G solvation = 63.136871 kcal Electronic energy + Delta-G solvation = -33714.985015 eV Core-core repulsion = 29354.246501 eV Total energy + Delta-G solvation = -4360.738513 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.173 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.80597 -41.63824 -40.50801 -39.08779 -38.38434 -37.80212 -35.15400 -34.51674 -33.73726 -32.05962 -31.79107 -30.67949 -28.80914 -27.88350 -26.73582 -26.60336 -26.03291 -24.64230 -23.96098 -22.97223 -21.88720 -21.82476 -20.39099 -20.09734 -19.18880 -18.67872 -18.50555 -17.72318 -17.50573 -17.03293 -16.70909 -16.45051 -16.33955 -15.95651 -15.68841 -15.59990 -15.27905 -15.08128 -15.00011 -14.85855 -14.64867 -14.48310 -14.06776 -13.99251 -13.96358 -13.65660 -13.58080 -13.46850 -13.41938 -13.22815 -13.19676 -12.92893 -12.78207 -12.69882 -12.61583 -12.07082 -11.99630 -11.69823 -11.54782 -11.16417 -11.09819 -11.00393 -10.37329 -10.21207 -10.03603 -9.63870 -9.54724 -9.39476 -9.09198 -5.02180 -0.19831 -0.01565 0.46758 0.52451 1.21848 1.38539 1.51643 1.65206 1.89360 1.94386 2.07981 2.82865 2.87123 3.27501 3.36346 3.45378 3.59153 3.66321 3.68412 3.73326 3.76487 3.82188 3.91240 4.00750 4.04843 4.10515 4.13680 4.16247 4.23466 4.31891 4.38645 4.40071 4.58742 4.62854 4.67757 4.71016 4.71991 4.78412 4.80141 4.84988 4.90255 4.96079 4.98217 5.01958 5.08936 5.13644 5.19899 5.24691 5.27658 5.37138 5.51272 5.59910 5.66581 5.67834 5.79863 5.80627 6.13841 6.15462 6.47927 6.49485 6.88643 7.26751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.077 4.077 5 H 0.101 0.899 6 C -0.135 4.135 7 C 0.122 3.878 8 H 0.107 0.893 9 N -0.711 5.711 10 C 0.575 3.425 11 O -0.528 6.528 12 C -0.234 4.234 13 C 0.180 3.820 14 N -0.503 5.503 15 C 0.308 3.692 16 N -0.569 5.569 17 C 0.072 3.928 18 C -0.133 4.133 19 C -0.044 4.044 20 O -0.533 6.533 21 Si 0.681 3.319 22 C -0.148 4.148 23 C 0.085 3.915 24 C -0.123 4.123 25 C -0.144 4.144 26 C -0.113 4.113 27 C -0.123 4.123 28 C -0.120 4.120 29 C -0.120 4.120 30 H 0.070 0.930 31 H 0.066 0.934 32 H 0.069 0.931 33 H 0.076 0.924 34 H 0.098 0.902 35 H 0.399 0.601 36 H 0.161 0.839 37 H 0.426 0.574 38 H 0.184 0.816 39 H 0.078 0.922 40 H 0.378 0.622 41 H -0.258 1.258 42 H -0.253 1.253 43 H 0.086 0.914 44 H 0.067 0.933 45 H 0.097 0.903 46 H 0.095 0.905 47 H 0.074 0.926 48 H 0.123 0.877 49 H 0.121 0.879 50 H 0.121 0.879 51 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.942 0.615 3.038 4.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.096 4.096 5 H 0.119 0.881 6 C -0.173 4.173 7 C 0.017 3.983 8 H 0.125 0.875 9 N -0.363 5.363 10 C 0.364 3.636 11 O -0.405 6.405 12 C -0.241 4.241 13 C 0.011 3.989 14 N -0.216 5.216 15 C 0.075 3.925 16 N -0.175 5.175 17 C -0.055 4.055 18 C -0.141 4.141 19 C -0.154 4.154 20 O -0.340 6.340 21 Si 0.581 3.419 22 C -0.154 4.154 23 C 0.077 3.923 24 C -0.178 4.178 25 C -0.182 4.182 26 C -0.131 4.131 27 C -0.141 4.141 28 C -0.138 4.138 29 C -0.138 4.138 30 H 0.089 0.911 31 H 0.085 0.915 32 H 0.088 0.912 33 H 0.095 0.905 34 H 0.117 0.883 35 H 0.234 0.766 36 H 0.178 0.822 37 H 0.265 0.735 38 H 0.201 0.799 39 H 0.096 0.904 40 H 0.226 0.774 41 H -0.182 1.182 42 H -0.177 1.177 43 H 0.104 0.896 44 H 0.085 0.915 45 H 0.116 0.884 46 H 0.113 0.887 47 H 0.093 0.907 48 H 0.141 0.859 49 H 0.139 0.861 50 H 0.139 0.861 51 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -3.786 0.768 2.521 4.612 hybrid contribution 0.732 -0.097 -0.868 1.139 sum -3.054 0.671 1.653 3.537 Atomic orbital electron populations 1.20860 0.91330 1.02886 1.02445 1.19795 0.96013 0.92660 0.99816 1.19516 0.93458 0.93746 1.00462 1.21666 0.99690 0.90867 0.97336 0.88136 1.23423 1.03620 0.94024 0.96265 1.21836 0.85473 0.94641 0.96384 0.87489 1.45559 1.08559 1.11513 1.70645 1.17859 0.88272 0.81309 0.76195 1.90755 1.38653 1.60695 1.50411 1.20394 0.94324 0.94824 1.14592 1.22484 0.85223 0.99022 0.92148 1.66430 1.26432 1.10658 1.18051 1.18470 0.86386 0.89160 0.98460 1.41485 1.07876 1.06475 1.61624 1.21721 0.95885 0.85641 1.02209 1.19427 0.91933 0.92697 1.10008 1.24161 1.01528 1.02359 0.87346 1.86644 1.69091 1.45319 1.32943 0.95261 0.81218 0.75631 0.89808 1.19455 0.92615 0.94346 1.09030 1.19885 0.93930 0.92233 0.86295 1.21159 0.94673 0.97486 1.04503 1.23566 1.01840 0.94632 0.98185 1.20999 0.93612 0.98171 1.00340 1.21146 0.99956 0.92518 1.00528 1.21162 0.94345 0.98188 1.00122 1.21057 0.94345 0.97506 1.00849 0.91096 0.91476 0.91245 0.90494 0.88327 0.76568 0.82159 0.73515 0.79923 0.90425 0.77391 1.18229 1.17714 0.89592 0.91477 0.88448 0.88656 0.90694 0.85939 0.86088 0.86126 0.86133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.13 9.33 36.01 0.34 0.47 16 2 C -0.08 -0.07 5.88 -104.62 -0.62 -0.68 16 3 C -0.07 -0.04 5.29 -104.63 -0.55 -0.59 16 4 C -0.08 0.10 3.41 -90.96 -0.31 -0.21 16 5 H 0.10 -0.21 6.08 -51.93 -0.32 -0.53 16 6 C -0.14 0.23 7.29 -25.92 -0.19 0.04 16 7 C 0.12 -0.06 4.32 -67.12 -0.29 -0.35 16 8 H 0.11 0.10 7.47 -51.93 -0.39 -0.29 16 9 N -0.71 0.37 5.21 -54.02 -0.28 0.09 16 10 C 0.58 1.40 7.72 -12.41 -0.10 1.31 16 11 O -0.53 -2.80 13.10 5.30 0.07 -2.73 16 12 C -0.23 -0.55 5.89 -104.82 -0.62 -1.17 16 13 C 0.18 0.20 10.67 -17.11 -0.18 0.02 16 14 N -0.50 -1.40 10.37 -11.96 -0.12 -1.52 16 15 C 0.31 0.84 8.42 -155.71 -1.31 -0.47 16 16 N -0.57 0.12 6.04 -12.12 -0.07 0.05 16 17 C 0.07 -0.05 10.44 -16.70 -0.17 -0.23 16 18 C -0.13 -0.16 5.61 -102.72 -0.58 -0.74 16 19 C -0.04 0.01 2.07 36.00 0.07 0.09 16 20 O -0.53 -0.55 12.86 -35.23 -0.45 -1.01 16 21 Si 0.68 -1.36 30.80 -169.99 -5.24 -6.60 16 22 C -0.15 -0.46 6.16 -105.13 -0.65 -1.11 16 23 C 0.09 0.28 5.98 -103.67 -0.62 -0.34 16 24 C -0.12 -0.33 8.67 36.01 0.31 -0.02 16 25 C -0.14 0.08 7.25 -25.92 -0.19 -0.10 16 26 C -0.11 -0.07 8.62 -39.58 -0.34 -0.41 16 27 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 28 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 29 C -0.12 -0.13 9.70 -39.58 -0.38 -0.51 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.07 -0.10 8.09 -51.93 -0.42 -0.52 16 32 H 0.07 -0.14 6.34 -51.93 -0.33 -0.47 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.10 -0.16 7.72 -51.93 -0.40 -0.56 16 35 H 0.40 -1.18 6.78 -40.82 -0.28 -1.46 16 36 H 0.16 -0.41 6.43 -52.49 -0.34 -0.75 16 37 H 0.43 -1.26 8.96 -40.82 -0.37 -1.62 16 38 H 0.18 -0.70 6.31 -52.49 -0.33 -1.03 16 39 H 0.08 -0.11 6.03 -51.93 -0.31 -0.42 16 40 H 0.38 -1.09 8.74 45.56 0.40 -0.69 16 41 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 42 H -0.25 -0.08 7.04 56.52 0.40 0.31 16 43 H 0.09 0.30 8.14 -51.93 -0.42 -0.12 16 44 H 0.07 0.08 5.06 -51.93 -0.26 -0.18 16 45 H 0.10 0.35 5.97 -51.93 -0.31 0.04 16 46 H 0.10 -0.07 6.30 -51.93 -0.33 -0.40 16 47 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 48 H 0.12 -0.10 6.65 -52.48 -0.35 -0.45 16 49 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 50 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 51 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 LS Contribution 405.00 15.07 6.10 6.10 Total: 0.00 -9.78 405.00 -13.65 -23.44 By element: Atomic # 1 Polarization: -5.29 SS G_CDS: -6.49 Total: -11.78 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -7.17 Total: -6.04 kcal Atomic # 7 Polarization: -0.91 SS G_CDS: -0.48 Total: -1.39 kcal Atomic # 8 Polarization: -3.35 SS G_CDS: -0.38 Total: -3.73 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.24 Total: -6.60 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -9.78 -13.65 -23.44 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.573 kcal (2) G-P(sol) polarization free energy of solvation -9.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.788 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.651 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.436 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.137 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds