Wall clock time and date at job start Tue Mar 9 2021 13:15:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38216 * 119.99971 * 2 1 4 4 C 1.50707 * 119.99835 * 359.97438 * 3 2 1 5 5 H 1.08994 * 112.85181 * 11.19685 * 4 3 2 6 6 C 1.53782 * 113.61239 * 142.50464 * 4 3 2 7 7 C 1.53786 * 87.07864 * 139.97687 * 6 4 3 8 8 H 1.08996 * 113.61495 * 220.01312 * 7 6 4 9 9 N 1.46504 * 113.60809 * 89.11382 * 7 6 4 10 10 C 1.34780 * 119.99554 * 107.50475 * 9 7 6 11 11 O 1.21654 * 120.00362 * 359.97438 * 10 9 7 12 12 C 1.47046 * 119.99865 * 179.97438 * 10 9 7 13 13 C 1.36220 * 123.49208 * 180.02562 * 12 10 9 14 14 Cl 1.73601 * 124.60760 * 0.02562 * 13 12 10 15 15 S 1.70453 * 110.78938 * 180.02562 * 13 12 10 16 16 C 1.75501 * 92.46359 * 359.97438 * 15 13 12 17 17 C 1.50701 * 124.68321 * 179.97438 * 16 15 13 18 18 O 1.42895 * 109.47105 * 245.02693 * 17 16 15 19 19 Si 1.86302 * 109.46947 * 5.02651 * 17 16 15 20 20 C 1.32689 * 110.63000 * 359.71229 * 16 15 13 21 21 C 1.53781 * 87.08247 * 334.56850 * 7 6 4 22 22 C 1.38256 * 120.00053 * 179.97438 * 3 2 1 23 23 C 1.38208 * 119.99998 * 359.80858 * 22 3 2 24 24 C 1.38260 * 120.00082 * 0.45007 * 23 22 3 25 25 C 1.38212 * 119.99650 * 359.50197 * 24 23 22 26 26 H 1.08995 * 109.47498 * 269.98140 * 1 2 3 27 27 H 1.08999 * 109.46948 * 29.98802 * 1 2 3 28 28 H 1.09009 * 109.46815 * 149.97775 * 1 2 3 29 29 H 1.08996 * 113.61039 * 254.52371 * 6 4 3 30 30 H 1.09003 * 113.61382 * 25.43298 * 6 4 3 31 31 H 0.96998 * 120.00518 * 287.49310 * 9 7 6 32 32 H 1.09003 * 109.46819 * 125.02070 * 17 16 15 33 33 H 0.96691 * 114.00114 * 60.00141 * 18 17 16 34 34 H 1.48506 * 109.99622 * 180.02562 * 19 17 16 35 35 H 1.48496 * 109.99944 * 301.31726 * 19 17 16 36 36 H 1.07998 * 123.45044 * 180.26875 * 20 16 15 37 37 H 1.09003 * 113.61068 * 270.88390 * 21 7 6 38 38 H 1.08999 * 113.61730 * 139.98238 * 21 7 6 39 39 H 1.07999 * 120.00037 * 179.97438 * 22 3 2 40 40 H 1.08004 * 120.00265 * 180.23005 * 23 22 3 41 41 H 1.08002 * 120.00476 * 179.78830 * 24 23 22 42 42 H 1.07999 * 119.99941 * 180.25946 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4445 2.5021 -0.0006 5 1 0.3795 2.3761 0.1941 6 6 2.1043 3.5948 0.8571 7 6 1.7292 4.5858 -0.2574 8 1 2.5040 5.3241 -0.4641 9 7 0.4023 5.1836 -0.0888 10 6 0.2868 6.4743 0.2816 11 8 1.2844 7.1429 0.4764 12 6 -1.0449 7.0745 0.4502 13 6 -1.2441 8.3700 0.8212 14 17 0.0252 9.5077 1.1501 15 16 -2.9090 8.7222 0.9186 16 6 -3.3586 7.0920 0.4494 17 6 -4.7762 6.6011 0.3059 18 8 -5.0333 5.5944 1.2868 19 14 -5.9538 8.0235 0.5523 20 6 -2.2781 6.3529 0.2331 21 6 1.7471 3.3875 -1.2210 22 6 3.5806 1.1970 0.0005 23 6 4.2717 0.0001 0.0051 24 6 3.5805 -1.1973 -0.0003 25 6 2.1983 -1.1973 0.0001 26 1 -0.3634 -0.0003 1.0276 27 1 -0.3633 0.8901 -0.5136 28 1 -0.3633 -0.8899 -0.5142 29 1 1.5885 3.7812 1.7990 30 1 3.1793 3.4631 0.9807 31 1 -0.3931 4.6505 -0.2439 32 1 -4.9163 6.1819 -0.6905 33 1 -4.9275 5.8978 2.1988 34 1 -7.3553 7.5523 0.4138 35 1 -5.7508 8.6241 1.8951 36 1 -2.3162 5.3171 -0.0701 37 1 2.7244 3.1992 -1.6655 38 1 0.9430 3.4067 -1.9567 39 1 4.1206 2.1323 0.0001 40 1 5.3517 0.0001 0.0092 41 1 4.1204 -2.1326 -0.0002 42 1 1.6583 -2.1326 0.0001 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:26 Heat of formation + Delta-G solvation = 13.805553 kcal Electronic energy + Delta-G solvation = -27039.072473 eV Core-core repulsion = 23103.926588 eV Total energy + Delta-G solvation = -3935.145885 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.069 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.71565 -40.61806 -39.27764 -38.64488 -37.86171 -37.05417 -34.53671 -33.73453 -31.86115 -31.47973 -27.96868 -27.09655 -26.76776 -26.66258 -25.27748 -23.02702 -22.33122 -21.85008 -20.86987 -20.10284 -19.47339 -18.15489 -17.91629 -17.57649 -16.89302 -16.64267 -16.55133 -16.08778 -15.90729 -15.82605 -15.68757 -15.06842 -14.94670 -14.80183 -14.52264 -14.38885 -14.30304 -14.01834 -13.98765 -13.55113 -13.49860 -13.25135 -13.06148 -12.83030 -12.72653 -12.61216 -12.49052 -12.10639 -12.01509 -11.90075 -11.73718 -11.57227 -11.19433 -11.00320 -10.72291 -10.12340 -9.92953 -9.73166 -9.65171 -9.41774 -5.22612 -0.62444 -0.22837 0.40432 0.44480 0.50381 0.66050 1.01190 1.07420 1.37980 1.75342 2.11426 2.24701 2.81003 3.05780 3.31992 3.41152 3.64171 3.68084 3.78877 3.83464 3.88686 3.98193 4.02543 4.13475 4.21266 4.24933 4.33569 4.37630 4.55943 4.60173 4.64107 4.68321 4.69383 4.76007 4.80837 4.86434 4.88196 4.95325 4.98317 5.10954 5.17688 5.25335 5.52606 5.63519 5.65690 5.77646 6.12747 6.13333 6.43346 7.19570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.077 4.077 5 H 0.100 0.900 6 C -0.143 4.143 7 C 0.122 3.878 8 H 0.107 0.893 9 N -0.707 5.707 10 C 0.579 3.421 11 O -0.515 6.515 12 C -0.159 4.159 13 C -0.114 4.114 14 Cl 0.027 6.973 15 S 0.238 5.762 16 C -0.234 4.234 17 C -0.031 4.031 18 O -0.522 6.522 19 Si 0.645 3.355 20 C -0.070 4.070 21 C -0.135 4.135 22 C -0.113 4.113 23 C -0.123 4.123 24 C -0.120 4.120 25 C -0.119 4.119 26 H 0.070 0.930 27 H 0.068 0.932 28 H 0.066 0.934 29 H 0.074 0.926 30 H 0.096 0.904 31 H 0.400 0.600 32 H 0.132 0.868 33 H 0.379 0.621 34 H -0.230 1.230 35 H -0.236 1.236 36 H 0.157 0.843 37 H 0.099 0.901 38 H 0.076 0.924 39 H 0.123 0.877 40 H 0.121 0.879 41 H 0.121 0.879 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.729 -1.015 -1.880 4.297 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.095 4.095 5 H 0.118 0.882 6 C -0.182 4.182 7 C 0.016 3.984 8 H 0.125 0.875 9 N -0.358 5.358 10 C 0.364 3.636 11 O -0.391 6.391 12 C -0.178 4.178 13 C -0.261 4.261 14 Cl 0.056 6.944 15 S 0.503 5.497 16 C -0.351 4.351 17 C -0.144 4.144 18 O -0.328 6.328 19 Si 0.543 3.457 20 C -0.099 4.099 21 C -0.173 4.173 22 C -0.131 4.131 23 C -0.141 4.141 24 C -0.138 4.138 25 C -0.137 4.137 26 H 0.089 0.911 27 H 0.087 0.913 28 H 0.085 0.915 29 H 0.093 0.907 30 H 0.114 0.886 31 H 0.235 0.765 32 H 0.149 0.851 33 H 0.227 0.773 34 H -0.153 1.153 35 H -0.160 1.160 36 H 0.174 0.826 37 H 0.117 0.883 38 H 0.095 0.905 39 H 0.141 0.859 40 H 0.139 0.861 41 H 0.139 0.861 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -4.481 0.859 -1.385 4.768 hybrid contribution 1.017 -2.202 0.572 2.492 sum -3.464 -1.344 -0.813 3.804 Atomic orbital electron populations 1.20856 0.91338 1.02864 1.02428 1.19790 0.96002 0.92660 0.99831 1.19517 0.93468 0.93735 1.00521 1.21659 0.99657 0.90877 0.97294 0.88180 1.23566 1.01873 0.94612 0.98126 1.21855 0.85383 0.94680 0.96467 0.87459 1.45478 1.08647 1.11322 1.70379 1.17388 0.87626 0.81609 0.76978 1.90883 1.37824 1.61145 1.49289 1.20216 0.94838 0.92963 1.09792 1.25542 0.98108 0.95606 1.06846 1.98445 1.47251 1.56009 1.92645 1.83419 0.92722 1.09604 1.63951 1.24746 1.00729 0.97901 1.11705 1.24393 0.93553 1.00046 0.96387 1.86638 1.91050 1.36574 1.18563 0.95195 0.81685 0.81064 0.87709 1.21001 0.88822 1.00627 0.99489 1.23422 1.03625 0.93970 0.96257 1.20998 0.93601 0.98185 1.00334 1.21149 0.99974 0.92507 1.00494 1.21169 0.94345 0.98200 1.00088 1.21056 0.94350 0.97503 1.00834 0.91112 0.91300 0.91457 0.90745 0.88609 0.76493 0.85055 0.77252 1.15264 1.15954 0.82592 0.88281 0.90513 0.85942 0.86060 0.86094 0.86113 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.13 9.33 36.01 0.34 0.47 16 2 C -0.08 -0.07 5.88 -104.62 -0.62 -0.68 16 3 C -0.07 -0.04 5.29 -104.62 -0.55 -0.59 16 4 C -0.08 0.09 3.41 -90.96 -0.31 -0.22 16 5 H 0.10 -0.20 6.07 -51.93 -0.32 -0.51 16 6 C -0.14 0.07 7.25 -25.92 -0.19 -0.12 16 7 C 0.12 -0.04 4.32 -67.11 -0.29 -0.33 16 8 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 9 N -0.71 0.32 5.24 -54.20 -0.28 0.03 16 10 C 0.58 1.43 7.79 -12.69 -0.10 1.33 16 11 O -0.52 -3.05 14.51 5.23 0.08 -2.97 16 12 C -0.16 -0.17 5.98 -104.58 -0.63 -0.80 16 13 C -0.11 -0.17 6.87 30.01 0.21 0.03 16 14 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 15 S 0.24 -0.27 20.19 -107.50 -2.17 -2.44 16 16 C -0.23 0.44 5.65 -36.20 -0.20 0.23 16 17 C -0.03 0.08 2.94 36.01 0.11 0.19 16 18 O -0.52 0.72 12.88 -35.23 -0.45 0.26 16 19 Si 0.65 -1.72 30.92 -169.99 -5.26 -6.97 16 20 C -0.07 0.10 9.75 -39.00 -0.38 -0.28 16 21 C -0.13 0.22 7.29 -25.92 -0.19 0.03 16 22 C -0.11 -0.07 8.61 -39.59 -0.34 -0.42 16 23 C -0.12 -0.11 10.05 -39.58 -0.40 -0.50 16 24 C -0.12 -0.12 10.05 -39.58 -0.40 -0.51 16 25 C -0.12 -0.12 9.70 -39.58 -0.38 -0.51 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.07 -0.14 6.33 -51.93 -0.33 -0.47 16 28 H 0.07 -0.10 8.09 -51.92 -0.42 -0.52 16 29 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 30 H 0.10 -0.06 6.31 -51.93 -0.33 -0.39 16 31 H 0.40 -1.16 7.24 -40.82 -0.30 -1.45 16 32 H 0.13 -0.50 7.96 -51.93 -0.41 -0.92 16 33 H 0.38 -1.49 8.70 45.56 0.40 -1.10 16 34 H -0.23 -0.04 7.11 56.52 0.40 0.36 16 35 H -0.24 0.23 7.11 56.52 0.40 0.64 16 36 H 0.16 -0.56 7.10 -52.49 -0.37 -0.93 16 37 H 0.10 -0.15 7.72 -51.93 -0.40 -0.55 16 38 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.12 -0.09 6.66 -52.49 -0.35 -0.44 16 40 H 0.12 -0.08 8.06 -52.48 -0.42 -0.51 16 41 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 42 H 0.12 -0.05 8.06 -52.49 -0.42 -0.48 16 LS Contribution 373.57 15.07 5.63 5.63 Total: 0.00 -6.84 373.57 -13.15 -19.98 By element: Atomic # 1 Polarization: -4.57 SS G_CDS: -4.95 Total: -9.52 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -4.33 Total: -2.68 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.28 Total: 0.03 kcal Atomic # 8 Polarization: -2.33 SS G_CDS: -0.38 Total: -2.71 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.26 Total: -6.97 kcal Atomic # 16 Polarization: -0.27 SS G_CDS: -2.17 Total: -2.44 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -6.84 -13.15 -19.98 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.787 kcal (2) G-P(sol) polarization free energy of solvation -6.836 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.146 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.982 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.806 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds