Wall clock time and date at job start Tue Mar 9 2021 13:15:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38218 * 120.00003 * 2 1 4 4 C 1.50696 * 119.99940 * 0.02562 * 3 2 1 5 5 H 1.08999 * 112.85114 * 348.53018 * 4 3 2 6 6 C 1.53785 * 113.61603 * 119.72175 * 4 3 2 7 7 C 1.53787 * 87.07834 * 140.06204 * 6 4 3 8 8 H 1.09001 * 113.61532 * 219.93348 * 7 6 4 9 9 N 1.46505 * 113.61124 * 89.12011 * 7 6 4 10 10 C 1.34775 * 119.99844 * 154.99472 * 9 7 6 11 11 O 1.21280 * 119.99985 * 0.02562 * 10 9 7 12 12 C 1.50705 * 119.99790 * 180.02562 * 10 9 7 13 13 C 1.50694 * 109.47213 * 180.02562 * 12 10 9 14 14 C 1.34850 * 125.89320 * 84.97336 * 13 12 10 15 15 C 1.40884 * 107.42192 * 180.02562 * 14 13 12 16 16 C 1.34854 * 107.41513 * 359.97438 * 15 14 13 17 17 C 1.50699 * 125.89246 * 179.74330 * 16 15 14 18 18 O 1.42897 * 109.47516 * 120.02295 * 17 16 15 19 19 Si 1.86306 * 109.46865 * 0.02562 * 17 16 15 20 20 N 1.36338 * 125.89246 * 265.00319 * 13 12 10 21 21 C 1.53777 * 87.08416 * 334.56907 * 7 6 4 22 22 C 1.38254 * 119.99991 * 179.72409 * 3 2 1 23 23 C 1.38211 * 120.00032 * 0.27519 * 22 3 2 24 24 C 1.38263 * 119.99755 * 359.97438 * 23 22 3 25 25 C 1.38209 * 120.00253 * 359.95414 * 24 23 22 26 26 H 1.09000 * 109.47360 * 89.99807 * 1 2 3 27 27 H 1.09001 * 109.47199 * 209.99674 * 1 2 3 28 28 H 1.08999 * 109.47150 * 329.99934 * 1 2 3 29 29 H 1.09000 * 113.60815 * 25.52081 * 6 4 3 30 30 H 1.08994 * 113.62030 * 254.61636 * 6 4 3 31 31 H 0.97005 * 119.99828 * 335.00164 * 9 7 6 32 32 H 1.08998 * 109.46934 * 60.00474 * 12 10 9 33 33 H 1.09005 * 109.46932 * 300.00381 * 12 10 9 34 34 H 1.08004 * 126.28908 * 0.04488 * 14 13 12 35 35 H 1.07998 * 126.29455 * 179.97438 * 15 14 13 36 36 H 1.09003 * 109.46848 * 240.02509 * 17 16 15 37 37 H 0.96702 * 113.99892 * 180.02562 * 18 17 16 38 38 H 1.48506 * 110.00042 * 298.68266 * 19 17 16 39 39 H 1.48499 * 110.00053 * 60.00274 * 19 17 16 40 40 H 0.97003 * 125.63151 * 359.97438 * 20 13 12 41 41 H 1.08997 * 113.61253 * 139.97441 * 21 7 6 42 42 H 1.08997 * 113.61308 * 270.88232 * 21 7 6 43 43 H 1.07994 * 120.00079 * 180.25452 * 22 3 2 44 44 H 1.07996 * 120.00194 * 179.97438 * 23 22 3 45 45 H 1.08004 * 119.99411 * 179.97438 * 24 23 22 46 46 H 1.07997 * 120.00227 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4446 2.5021 0.0006 5 1 0.3804 2.3765 -0.1988 6 6 1.7420 3.3846 1.2243 7 6 1.7260 4.5854 0.2637 8 1 2.4983 5.3248 0.4760 9 7 0.3990 5.1822 0.0924 10 6 0.2833 6.4737 -0.2749 11 8 1.2776 7.1418 -0.4640 12 6 -1.0818 7.0877 -0.4505 13 6 -0.9347 8.5302 -0.8612 14 6 -0.7617 8.9799 -2.1206 15 6 -0.6699 10.3844 -2.0581 16 6 -0.7909 10.7395 -0.7628 17 6 -0.7470 12.1464 -0.2246 18 8 -1.9777 12.4413 0.4389 19 14 -0.4981 13.3420 -1.6317 20 7 -0.9531 9.6056 -0.0234 21 6 2.1060 3.5978 -0.8520 22 6 3.5806 1.1970 0.0058 23 6 4.2717 0.0001 0.0058 24 6 3.5804 -1.1973 0.0006 25 6 2.1983 -1.1973 -0.0037 26 1 -0.3634 0.0000 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3633 0.8900 0.5138 29 1 2.7181 3.1963 1.6715 30 1 0.9356 3.4010 1.9574 31 1 -0.3963 4.6477 0.2435 32 1 -1.6292 7.0315 0.4903 33 1 -1.6280 6.5446 -1.2218 34 1 -0.7044 8.3747 -3.0133 35 1 -0.5286 11.0536 -2.8939 36 1 0.0780 12.2397 0.4817 37 1 -2.0203 13.3330 0.8107 38 1 0.7938 13.0661 -2.3101 39 1 -1.6164 13.2247 -2.6017 40 1 -1.0637 9.5699 0.9397 41 1 1.5932 3.7862 -1.7952 42 1 3.1815 3.4678 -0.9724 43 1 4.1206 2.1323 0.0099 44 1 5.3517 0.0000 0.0099 45 1 4.1205 -2.1326 0.0002 46 1 1.6583 -2.1326 -0.0074 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:36 Heat of formation + Delta-G solvation = 26.463347 kcal Electronic energy + Delta-G solvation = -26544.790574 eV Core-core repulsion = 22788.103729 eV Total energy + Delta-G solvation = -3756.686845 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.28555 -41.60713 -40.27648 -38.74950 -37.64640 -34.60634 -33.79699 -33.11867 -31.86786 -31.57244 -29.45391 -27.92226 -26.79808 -26.22018 -24.99554 -23.19598 -22.08480 -21.88008 -21.26472 -20.96654 -20.12077 -18.47008 -18.33989 -18.06177 -17.53958 -16.95447 -16.49764 -16.33578 -15.93555 -15.76173 -15.29220 -15.14939 -14.92997 -14.84726 -14.69045 -14.59114 -14.21157 -14.10057 -14.02265 -13.78481 -13.53019 -13.33553 -13.27393 -13.25681 -12.90163 -12.81594 -12.70083 -12.44133 -12.12229 -11.87599 -11.76512 -11.60282 -11.22548 -10.89162 -10.43304 -10.09953 -9.70714 -9.67979 -9.44182 -8.86853 -4.94907 0.42195 0.48113 1.14717 1.28559 1.61321 1.75339 1.91151 2.10571 2.25452 2.48978 2.78620 3.38653 3.40006 3.59716 3.63434 3.65924 3.84373 3.92847 3.95103 3.97272 4.00239 4.03987 4.11049 4.18931 4.33914 4.35156 4.35455 4.53884 4.55943 4.57064 4.65249 4.66562 4.73304 4.78276 4.83004 4.85470 4.92077 4.95333 5.08673 5.15386 5.22835 5.30359 5.35918 5.50597 5.61281 5.63578 5.75187 6.06517 6.11094 6.19914 6.41470 6.55152 6.69076 7.21137 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.076 4.076 5 H 0.101 0.899 6 C -0.135 4.135 7 C 0.120 3.880 8 H 0.104 0.896 9 N -0.716 5.716 10 C 0.514 3.486 11 O -0.521 6.521 12 C -0.071 4.071 13 C 0.036 3.964 14 C -0.170 4.170 15 C -0.195 4.195 16 C 0.037 3.963 17 C -0.053 4.053 18 O -0.552 6.552 19 Si 0.715 3.285 20 N -0.532 5.532 21 C -0.143 4.143 22 C -0.114 4.114 23 C -0.123 4.123 24 C -0.120 4.120 25 C -0.119 4.119 26 H 0.070 0.930 27 H 0.067 0.933 28 H 0.068 0.932 29 H 0.097 0.903 30 H 0.075 0.925 31 H 0.401 0.599 32 H 0.101 0.899 33 H 0.118 0.882 34 H 0.137 0.863 35 H 0.133 0.867 36 H 0.071 0.929 37 H 0.384 0.616 38 H -0.254 1.254 39 H -0.250 1.250 40 H 0.413 0.587 41 H 0.074 0.926 42 H 0.094 0.906 43 H 0.122 0.878 44 H 0.121 0.879 45 H 0.121 0.879 46 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.187 -0.406 3.168 3.871 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.094 4.094 5 H 0.119 0.881 6 C -0.173 4.173 7 C 0.014 3.986 8 H 0.122 0.878 9 N -0.368 5.368 10 C 0.299 3.701 11 O -0.395 6.395 12 C -0.111 4.111 13 C -0.077 4.077 14 C -0.195 4.195 15 C -0.220 4.220 16 C -0.076 4.076 17 C -0.163 4.163 18 O -0.358 6.358 19 Si 0.614 3.386 20 N -0.127 5.127 21 C -0.182 4.182 22 C -0.131 4.131 23 C -0.141 4.141 24 C -0.138 4.138 25 C -0.137 4.137 26 H 0.089 0.911 27 H 0.086 0.914 28 H 0.087 0.913 29 H 0.116 0.884 30 H 0.094 0.906 31 H 0.235 0.765 32 H 0.119 0.881 33 H 0.136 0.864 34 H 0.155 0.845 35 H 0.151 0.849 36 H 0.089 0.911 37 H 0.232 0.768 38 H -0.178 1.178 39 H -0.174 1.174 40 H 0.250 0.750 41 H 0.093 0.907 42 H 0.113 0.887 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.139 0.861 46 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -1.504 -0.420 2.140 2.649 hybrid contribution -0.255 -1.143 0.749 1.390 sum -1.759 -1.564 2.889 3.726 Atomic orbital electron populations 1.20855 0.91336 1.02852 1.02433 1.19791 0.96006 0.92656 0.99854 1.19514 0.93466 0.93741 1.00559 1.21647 0.99662 0.90854 0.97238 0.88142 1.23419 1.03528 0.94103 0.96258 1.21842 0.85708 0.94598 0.96428 0.87809 1.45679 1.08497 1.11658 1.70942 1.20616 0.91552 0.81489 0.76394 1.90771 1.39079 1.61116 1.48521 1.20127 0.95368 0.91006 1.04641 1.19431 1.10426 0.87564 0.90297 1.20534 1.08807 0.94198 0.95960 1.20504 1.11190 0.95901 0.94436 1.19655 1.10263 0.86449 0.91267 1.24447 0.89283 0.96543 1.06042 1.86476 1.35555 1.37593 1.76209 0.95419 0.80641 0.85376 0.77176 1.41742 1.56641 1.05056 1.09262 1.23552 1.01833 0.94635 0.98144 1.20998 0.93616 0.98181 1.00345 1.21152 0.99985 0.92506 1.00476 1.21171 0.94347 0.98201 1.00047 1.21058 0.94352 0.97508 1.00813 0.91093 0.91450 0.91319 0.88417 0.90590 0.76454 0.88065 0.86387 0.84488 0.84910 0.91105 0.76834 1.17838 1.17399 0.74992 0.90724 0.88722 0.85987 0.86051 0.86070 0.86088 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.16 9.32 36.01 0.34 0.50 16 2 C -0.08 -0.06 5.88 -104.62 -0.62 -0.67 16 3 C -0.07 -0.03 5.29 -104.63 -0.55 -0.59 16 4 C -0.08 0.10 3.40 -90.96 -0.31 -0.21 16 5 H 0.10 -0.24 6.08 -51.93 -0.32 -0.55 16 6 C -0.14 0.24 7.29 -25.91 -0.19 0.05 16 7 C 0.12 -0.06 4.32 -67.11 -0.29 -0.35 16 8 H 0.10 0.16 7.46 -51.93 -0.39 -0.23 16 9 N -0.72 0.98 5.26 -53.01 -0.28 0.70 16 10 C 0.51 0.70 7.82 -10.98 -0.09 0.61 16 11 O -0.52 -3.24 15.63 5.56 0.09 -3.15 16 12 C -0.07 0.06 6.24 -29.04 -0.18 -0.12 16 13 C 0.04 0.11 5.66 -81.79 -0.46 -0.36 16 14 C -0.17 -0.75 10.76 -39.78 -0.43 -1.18 16 15 C -0.20 -0.99 9.37 -39.78 -0.37 -1.36 16 16 C 0.04 0.15 6.54 -81.79 -0.53 -0.38 16 17 C -0.05 -0.05 3.07 36.01 0.11 0.06 16 18 O -0.55 -0.31 12.86 -35.23 -0.45 -0.76 16 19 Si 0.71 -0.13 30.58 -169.99 -5.20 -5.32 16 20 N -0.53 -1.57 6.07 -5.44 -0.03 -1.60 16 21 C -0.14 0.08 7.26 -25.92 -0.19 -0.11 16 22 C -0.11 -0.07 8.61 -39.58 -0.34 -0.42 16 23 C -0.12 -0.10 10.05 -39.58 -0.40 -0.50 16 24 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 25 C -0.12 -0.11 9.70 -39.59 -0.38 -0.49 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 -0.12 8.09 -51.93 -0.42 -0.54 16 28 H 0.07 -0.16 6.34 -51.93 -0.33 -0.49 16 29 H 0.10 -0.14 7.72 -51.93 -0.40 -0.55 16 30 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.40 -1.69 8.70 -40.82 -0.36 -2.04 16 32 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 33 H 0.12 -0.36 8.14 -51.93 -0.42 -0.78 16 34 H 0.14 0.41 8.06 -52.48 -0.42 -0.02 16 35 H 0.13 0.58 6.22 -52.49 -0.33 0.26 16 36 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 37 H 0.38 -1.77 8.74 45.56 0.40 -1.38 16 38 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 39 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 40 H 0.41 0.31 8.96 -40.82 -0.37 -0.06 16 41 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 42 H 0.09 -0.05 6.32 -51.93 -0.33 -0.38 16 43 H 0.12 -0.08 6.67 -52.49 -0.35 -0.43 16 44 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 45 H 0.12 -0.08 8.06 -52.48 -0.42 -0.51 16 46 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 LS Contribution 377.48 15.07 5.69 5.69 Total: 0.00 -10.50 377.48 -12.07 -22.57 By element: Atomic # 1 Polarization: -5.50 SS G_CDS: -6.60 Total: -12.09 kcal Atomic # 6 Polarization: -0.75 SS G_CDS: -5.28 Total: -6.03 kcal Atomic # 7 Polarization: -0.59 SS G_CDS: -0.31 Total: -0.90 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -0.37 Total: -3.91 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: -5.20 Total: -5.32 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -10.50 -12.07 -22.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.037 kcal (2) G-P(sol) polarization free energy of solvation -10.504 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.574 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.463 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds