Wall clock time and date at job start Tue Mar 9 2021 13:15:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38220 * 119.99880 * 2 1 4 4 C 1.50706 * 119.99654 * 0.02562 * 3 2 1 5 5 H 1.08999 * 112.84907 * 348.80151 * 4 3 2 6 6 C 1.53782 * 113.61290 * 119.99805 * 4 3 2 7 7 C 1.53775 * 87.08074 * 139.97692 * 6 4 3 8 8 H 1.09005 * 113.62060 * 220.01985 * 7 6 4 9 9 N 1.46503 * 113.61436 * 89.20067 * 7 6 4 10 10 C 1.34773 * 120.00399 * 154.99864 * 9 7 6 11 11 O 1.21282 * 119.99569 * 0.02562 * 10 9 7 12 12 C 1.50704 * 120.00190 * 180.02562 * 10 9 7 13 13 C 1.53038 * 109.32821 * 180.34894 * 12 10 9 14 14 C 1.53497 * 108.58617 * 189.99885 * 13 12 10 15 15 N 1.47027 * 107.50560 * 61.21153 * 14 13 12 16 16 C 1.38929 * 118.88573 * 316.25991 * 15 14 13 17 17 C 1.31115 * 121.84674 * 13.28558 * 16 15 14 18 18 C 1.50700 * 118.54474 * 179.62139 * 17 16 15 19 19 O 1.42902 * 109.47286 * 250.02270 * 18 17 16 20 20 Si 1.86295 * 109.47431 * 10.02481 * 18 17 16 21 21 C 1.53776 * 113.61107 * 217.49259 * 4 3 2 22 22 C 1.38256 * 120.00223 * 180.27897 * 3 2 1 23 23 C 1.38218 * 119.99722 * 359.49249 * 22 3 2 24 24 C 1.38256 * 119.99959 * 0.48827 * 23 22 3 25 25 C 1.38216 * 120.00072 * 359.78470 * 24 23 22 26 26 H 1.08999 * 109.47049 * 89.99731 * 1 2 3 27 27 H 1.09006 * 109.46835 * 209.99891 * 1 2 3 28 28 H 1.09005 * 109.47177 * 329.99586 * 1 2 3 29 29 H 1.08999 * 113.61626 * 254.53142 * 6 4 3 30 30 H 1.09005 * 113.61073 * 25.42887 * 6 4 3 31 31 H 0.96998 * 119.99760 * 335.00294 * 9 7 6 32 32 H 1.08993 * 109.32748 * 300.00240 * 12 10 9 33 33 H 1.09008 * 109.62062 * 309.88914 * 13 12 10 34 34 H 1.09003 * 109.62415 * 70.44382 * 13 12 10 35 35 H 1.08994 * 109.96218 * 301.68460 * 14 13 12 36 36 H 1.09001 * 109.88125 * 180.69464 * 14 13 12 37 37 H 0.97001 * 120.56090 * 136.27337 * 15 14 13 38 38 H 1.08004 * 119.07636 * 193.31977 * 16 15 14 39 39 H 1.09000 * 109.46932 * 130.02655 * 18 17 16 40 40 H 0.96699 * 114.00025 * 180.02562 * 19 18 17 41 41 H 1.48494 * 110.00218 * 178.67947 * 20 18 17 42 42 H 1.48504 * 109.99925 * 300.00214 * 20 18 17 43 43 H 1.08996 * 113.61717 * 334.57125 * 21 4 3 44 44 H 1.09006 * 113.61383 * 105.47248 * 21 4 3 45 45 H 1.07998 * 120.00433 * 179.72674 * 22 3 2 46 46 H 1.07999 * 119.99942 * 180.25466 * 23 22 3 47 47 H 1.08001 * 120.00226 * 179.76923 * 24 23 22 48 48 H 1.08000 * 120.00516 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4444 2.5021 0.0006 5 1 0.3794 2.3760 -0.1941 6 6 1.7469 3.3876 1.2210 7 6 1.7291 4.5858 0.2573 8 1 2.5039 5.3242 0.4641 9 7 0.4026 5.1848 0.0903 10 6 0.2878 6.4756 -0.2800 11 8 1.2827 7.1412 -0.4754 12 6 -1.0768 7.0919 -0.4512 13 6 -0.9225 8.5527 -0.8806 14 6 -2.2970 9.2320 -0.8070 15 7 -2.7479 9.1677 0.5910 16 6 -2.5864 7.9805 1.2942 17 6 -1.8258 7.0101 0.8482 18 6 -1.6971 5.7575 1.6760 19 8 -0.3802 5.6830 2.2258 20 14 -2.9457 5.7954 3.0581 21 6 2.1042 3.5948 -0.8570 22 6 3.5806 1.1971 -0.0058 23 6 4.2717 0.0002 -0.0011 24 6 3.5805 -1.1972 -0.0007 25 6 2.1984 -1.1973 -0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 -0.8901 0.5138 28 1 -0.3634 0.8900 0.5139 29 1 0.9429 3.4067 1.9566 30 1 2.7243 3.1993 1.6655 31 1 -0.3931 4.6524 0.2463 32 1 -1.6253 6.5462 -1.2189 33 1 -0.2253 9.0589 -0.2128 34 1 -0.5502 8.5960 -1.9041 35 1 -3.0058 8.7083 -1.4484 36 1 -2.2136 10.2725 -1.1210 37 1 -3.1514 9.9411 1.0151 38 1 -3.1022 7.8532 2.2345 39 1 -1.8779 4.8860 1.0468 40 1 -0.2254 4.8997 2.7713 41 1 -2.8506 4.5510 3.8628 42 1 -2.7100 6.9791 3.9232 43 1 3.1791 3.4632 -0.9807 44 1 1.5885 3.7813 -1.7991 45 1 4.1206 2.1324 -0.0103 46 1 5.3517 0.0002 -0.0015 47 1 4.1205 -2.1325 -0.0007 48 1 1.6583 -2.1326 -0.0006 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_15608500.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:41 Heat of formation + Delta-G solvation = 25.929117 kcal Electronic energy + Delta-G solvation = -29169.140078 eV Core-core repulsion = 25385.118588 eV Total energy + Delta-G solvation = -3784.021490 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.178 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.84610 -40.88843 -39.41256 -38.54123 -37.66851 -34.46749 -33.76367 -33.27552 -32.78100 -31.47222 -27.89433 -27.32600 -26.69245 -26.41350 -25.34715 -23.20196 -22.99409 -21.84540 -21.81999 -20.05939 -19.22879 -18.65371 -18.35931 -18.03724 -17.48448 -16.99069 -16.63545 -16.28603 -15.98982 -15.74452 -15.30231 -15.16255 -14.93462 -14.81394 -14.68724 -14.54775 -14.31082 -13.97450 -13.85424 -13.74491 -13.44476 -13.38154 -13.21345 -13.12928 -13.02111 -12.77234 -12.66317 -12.29110 -12.04540 -11.81651 -11.68300 -11.64940 -11.50520 -11.25727 -11.12274 -10.71256 -10.31578 -9.77778 -9.65611 -9.41273 -8.41130 -4.85551 0.43031 0.47994 1.25699 1.41542 1.63855 1.85641 2.03356 2.31766 2.67713 2.79786 3.50195 3.56272 3.70193 3.73420 3.78472 3.89225 3.94972 4.03476 4.05554 4.06981 4.19905 4.24050 4.25481 4.28497 4.40539 4.44526 4.50684 4.60388 4.66748 4.71769 4.76065 4.81824 4.82413 4.84042 4.85423 4.94349 4.96959 5.01814 5.04747 5.19238 5.21942 5.24434 5.30760 5.34023 5.48452 5.60586 5.63544 5.72318 5.80614 6.14356 6.34888 6.67850 6.72796 6.96025 7.43144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.093 4.093 3 C -0.079 4.079 4 C -0.065 4.065 5 H 0.115 0.885 6 C -0.122 4.122 7 C 0.125 3.875 8 H 0.069 0.931 9 N -0.675 5.675 10 C 0.533 3.467 11 O -0.600 6.600 12 C -0.038 4.038 13 C -0.120 4.120 14 C 0.123 3.877 15 N -0.747 5.747 16 C 0.155 3.845 17 C -0.253 4.253 18 C -0.062 4.062 19 O -0.548 6.548 20 Si 0.748 3.252 21 C -0.145 4.145 22 C -0.125 4.125 23 C -0.138 4.138 24 C -0.133 4.133 25 C -0.134 4.134 26 H 0.076 0.924 27 H 0.071 0.929 28 H 0.081 0.919 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.409 0.591 32 H 0.118 0.882 33 H 0.044 0.956 34 H 0.077 0.923 35 H 0.081 0.919 36 H 0.095 0.905 37 H 0.412 0.588 38 H 0.142 0.858 39 H 0.092 0.908 40 H 0.379 0.621 41 H -0.293 1.293 42 H -0.309 1.309 43 H 0.088 0.912 44 H 0.066 0.934 45 H 0.127 0.873 46 H 0.130 0.870 47 H 0.132 0.868 48 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.023 -2.487 -0.670 8.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.093 4.093 3 C -0.079 4.079 4 C -0.083 4.083 5 H 0.133 0.867 6 C -0.159 4.159 7 C 0.019 3.981 8 H 0.087 0.913 9 N -0.327 5.327 10 C 0.321 3.679 11 O -0.481 6.481 12 C -0.059 4.059 13 C -0.159 4.159 14 C -0.001 4.001 15 N -0.377 5.377 16 C 0.032 3.968 17 C -0.264 4.264 18 C -0.172 4.172 19 O -0.357 6.357 20 Si 0.656 3.344 21 C -0.184 4.184 22 C -0.143 4.143 23 C -0.156 4.156 24 C -0.151 4.151 25 C -0.151 4.151 26 H 0.094 0.906 27 H 0.090 0.910 28 H 0.099 0.901 29 H 0.108 0.892 30 H 0.109 0.891 31 H 0.249 0.751 32 H 0.135 0.865 33 H 0.063 0.937 34 H 0.095 0.905 35 H 0.099 0.901 36 H 0.114 0.886 37 H 0.248 0.752 38 H 0.159 0.841 39 H 0.109 0.891 40 H 0.228 0.772 41 H -0.221 1.221 42 H -0.238 1.238 43 H 0.106 0.894 44 H 0.085 0.915 45 H 0.145 0.855 46 H 0.148 0.852 47 H 0.149 0.851 48 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -7.379 -1.499 -0.421 7.541 hybrid contribution 1.314 -0.539 0.727 1.596 sum -6.064 -2.038 0.306 6.405 Atomic orbital electron populations 1.20903 0.89793 1.03717 1.03001 1.20102 0.97297 0.92502 0.99429 1.19721 0.93473 0.94468 1.00286 1.21615 1.00019 0.89640 0.96993 0.86684 1.23328 1.03599 0.92856 0.96160 1.21618 0.85983 0.93813 0.96697 0.91319 1.45545 1.08094 1.10981 1.68117 1.20795 0.91275 0.81702 0.74132 1.90655 1.41159 1.62745 1.53554 1.19764 0.91598 0.97196 0.97380 1.21664 0.98033 0.94360 1.01866 1.21705 0.93568 1.02088 0.82735 1.44670 1.67833 1.12305 1.12932 1.20620 0.94770 0.86131 0.95279 1.19605 1.07851 0.99264 0.99665 1.24686 0.90996 0.98485 1.03055 1.86847 1.29991 1.49724 1.69144 0.94547 0.86454 0.75736 0.77693 1.23559 1.01521 0.95353 0.97940 1.21192 0.94194 0.98423 1.00482 1.21369 1.00661 0.92745 1.00849 1.21403 0.94788 0.98690 1.00258 1.21318 0.94534 0.98296 1.00999 0.90585 0.90995 0.90054 0.89163 0.89110 0.75090 0.86463 0.93673 0.90452 0.90118 0.88629 0.75197 0.84103 0.89087 0.77166 1.22072 1.23754 0.89357 0.91546 0.85535 0.85228 0.85052 0.84983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.47 9.33 71.24 0.66 1.14 16 2 C -0.09 -0.11 5.88 -19.86 -0.12 -0.22 16 3 C -0.08 -0.11 5.29 -19.86 -0.11 -0.21 16 4 C -0.06 0.15 3.41 -11.01 -0.04 0.11 16 5 H 0.12 -0.64 6.07 -2.39 -0.01 -0.65 16 6 C -0.12 0.32 7.29 31.12 0.23 0.54 16 7 C 0.13 0.28 4.27 45.51 0.19 0.47 16 8 H 0.07 0.62 7.46 -2.38 -0.02 0.61 16 9 N -0.68 -0.61 2.92 -440.03 -1.29 -1.90 16 10 C 0.53 4.02 6.37 87.66 0.56 4.58 16 11 O -0.60 -10.63 15.40 -3.04 -0.05 -10.67 16 12 C -0.04 -0.05 2.75 -12.43 -0.03 -0.09 16 13 C -0.12 -0.32 4.89 30.77 0.15 -0.17 16 14 C 0.12 -0.49 7.16 86.45 0.62 0.13 16 15 N -0.75 2.67 5.83 -345.97 -2.02 0.65 16 16 C 0.15 -0.28 9.62 83.41 0.80 0.52 16 17 C -0.25 0.19 5.18 -16.76 -0.09 0.10 16 18 C -0.06 0.26 1.73 71.24 0.12 0.38 16 19 O -0.55 0.00 9.40 -148.98 -1.40 -1.40 16 20 Si 0.75 -3.15 29.91 68.60 2.05 -1.10 16 21 C -0.15 -0.14 7.25 31.12 0.23 0.09 16 22 C -0.13 -0.33 8.62 22.27 0.19 -0.14 16 23 C -0.14 -0.41 10.05 22.27 0.22 -0.19 16 24 C -0.13 -0.35 10.05 22.27 0.22 -0.13 16 25 C -0.13 -0.28 9.70 22.27 0.22 -0.06 16 26 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 27 H 0.07 -0.35 8.09 -2.38 -0.02 -0.37 16 28 H 0.08 -0.55 6.34 -2.38 -0.02 -0.56 16 29 H 0.09 -0.56 6.85 -2.39 -0.02 -0.58 16 30 H 0.09 -0.11 7.73 -2.38 -0.02 -0.13 16 31 H 0.41 -2.00 5.61 -92.71 -0.52 -2.52 16 32 H 0.12 -0.42 8.14 -2.39 -0.02 -0.43 16 33 H 0.04 0.44 7.76 -2.38 -0.02 0.42 16 34 H 0.08 0.20 8.14 -2.39 -0.02 0.18 16 35 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 36 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 37 H 0.41 -2.93 8.96 -92.71 -0.83 -3.76 16 38 H 0.14 -0.59 4.34 -2.91 -0.01 -0.60 16 39 H 0.09 -0.92 6.39 -2.39 -0.02 -0.94 16 40 H 0.38 -2.36 7.49 -74.06 -0.55 -2.92 16 41 H -0.29 -0.20 7.11 99.48 0.71 0.50 16 42 H -0.31 -1.26 6.89 99.48 0.69 -0.57 16 43 H 0.09 0.15 6.30 -2.39 -0.02 0.14 16 44 H 0.07 0.15 8.14 -2.38 -0.02 0.13 16 45 H 0.13 0.11 6.64 -2.91 -0.02 0.09 16 46 H 0.13 0.01 8.06 -2.91 -0.02 -0.01 16 47 H 0.13 -0.08 8.06 -2.91 -0.02 -0.10 16 48 H 0.13 -0.16 8.06 -2.91 -0.02 -0.18 16 Total: 0.00 -21.88 365.36 0.46 -21.42 By element: Atomic # 1 Polarization: -12.97 SS G_CDS: -0.88 Total: -13.85 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: 4.04 Total: 6.85 kcal Atomic # 7 Polarization: 2.06 SS G_CDS: -3.30 Total: -1.24 kcal Atomic # 8 Polarization: -10.62 SS G_CDS: -1.45 Total: -12.07 kcal Atomic # 14 Polarization: -3.15 SS G_CDS: 2.05 Total: -1.10 kcal Total: -21.88 0.46 -21.42 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_15608500.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.347 kcal (2) G-P(sol) polarization free energy of solvation -21.879 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.418 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.929 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds