Wall clock time and date at job start Tue Mar 9 2021 13:15:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38209 * 120.00250 * 2 1 4 4 C 1.50698 * 120.00297 * 0.04495 * 3 2 1 5 5 H 1.09006 * 112.84957 * 350.58680 * 4 3 2 6 6 C 1.53777 * 113.61668 * 121.78591 * 4 3 2 7 7 C 1.53783 * 87.08407 * 139.98435 * 6 4 3 8 8 H 1.08995 * 113.61181 * 219.93855 * 7 6 4 9 9 N 1.46492 * 113.61284 * 89.11428 * 7 6 4 10 10 C 1.34779 * 119.99633 * 155.00401 * 9 7 6 11 11 O 1.21283 * 120.00507 * 359.97438 * 10 9 7 12 12 C 1.50701 * 119.99991 * 180.02562 * 10 9 7 13 13 O 1.42905 * 109.47176 * 179.97438 * 12 10 9 14 14 C 1.35896 * 116.99945 * 180.02562 * 13 12 10 15 15 C 1.38734 * 120.05746 * 359.72102 * 14 13 12 16 16 C 1.38144 * 119.94289 * 179.70526 * 15 14 13 17 17 C 1.38262 * 120.05625 * 0.59184 * 16 15 14 18 18 C 1.50703 * 119.94635 * 179.70066 * 17 16 15 19 19 O 1.42905 * 109.46850 * 119.97931 * 18 17 16 20 20 Si 1.86305 * 109.47051 * 359.97438 * 18 17 16 21 21 C 1.38263 * 120.11485 * 359.68678 * 17 16 15 22 22 C 1.38151 * 120.05181 * 0.02562 * 21 17 16 23 23 C 1.53782 * 113.61467 * 219.39698 * 4 3 2 24 24 C 1.38260 * 120.00092 * 180.30571 * 3 2 1 25 25 C 1.38212 * 119.99650 * 359.45889 * 24 3 2 26 26 C 1.38254 * 120.00319 * 0.26336 * 25 24 3 27 27 C 1.38216 * 119.99725 * 0.02562 * 26 25 24 28 28 H 1.09000 * 109.46767 * 270.23662 * 1 2 3 29 29 H 1.09004 * 109.47240 * 30.23169 * 1 2 3 30 30 H 1.08995 * 109.47480 * 150.23331 * 1 2 3 31 31 H 1.09003 * 113.61294 * 254.53068 * 6 4 3 32 32 H 1.08995 * 113.61275 * 25.43281 * 6 4 3 33 33 H 0.97004 * 120.00797 * 335.00120 * 9 7 6 34 34 H 1.09005 * 109.47277 * 299.99724 * 12 10 9 35 35 H 1.08994 * 109.47539 * 59.99864 * 12 10 9 36 36 H 1.08003 * 120.02707 * 359.97438 * 15 14 13 37 37 H 1.08004 * 119.97378 * 180.27626 * 16 15 14 38 38 H 1.08994 * 109.47820 * 239.98464 * 18 17 16 39 39 H 0.96699 * 113.99773 * 180.02562 * 19 18 17 40 40 H 1.48502 * 109.99955 * 298.67779 * 20 18 17 41 41 H 1.48499 * 110.00017 * 59.99488 * 20 18 17 42 42 H 1.07998 * 119.98002 * 180.02562 * 21 17 16 43 43 H 1.07998 * 120.02817 * 180.02562 * 22 21 17 44 44 H 1.08997 * 113.61609 * 334.56022 * 23 4 3 45 45 H 1.08999 * 113.61824 * 105.47473 * 23 4 3 46 46 H 1.08002 * 120.00476 * 179.74522 * 24 3 2 47 47 H 1.07999 * 119.99941 * 180.27784 * 25 24 3 48 48 H 1.07997 * 120.00486 * 179.97438 * 26 25 24 49 49 H 1.08002 * 119.99716 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4447 2.5021 0.0010 5 1 0.3747 2.3733 -0.1626 6 6 1.7803 3.4062 1.1988 7 6 1.7359 4.5895 0.2176 8 1 2.5151 5.3313 0.3927 9 7 0.4049 5.1848 0.0763 10 6 0.2791 6.4697 -0.3108 11 8 1.2678 7.1332 -0.5416 12 6 -1.0901 7.0824 -0.4557 13 8 -0.9613 8.4432 -0.8729 14 6 -2.1111 9.1453 -1.0510 15 6 -3.3383 8.5355 -0.8344 16 6 -4.5055 9.2532 -1.0102 17 6 -4.4518 10.5746 -1.4136 18 6 -5.7268 11.3533 -1.6112 19 8 -5.7372 12.4808 -0.7333 20 14 -7.1872 10.2594 -1.2347 21 6 -3.2302 11.1830 -1.6357 22 6 -2.0599 10.4713 -1.4555 23 6 2.0792 3.5803 -0.8933 24 6 3.5807 1.1969 -0.0064 25 6 4.2717 -0.0001 -0.0015 26 6 3.5804 -1.1974 0.0043 27 6 2.1982 -1.1973 0.0047 28 1 -0.3633 0.0042 1.0277 29 1 -0.3634 0.8879 -0.5174 30 1 -0.3634 -0.8920 -0.5102 31 1 0.9966 3.4369 1.9557 32 1 2.7694 3.2245 1.6193 33 1 -0.3859 4.6544 0.2611 34 1 -1.6601 6.5263 -1.1999 35 1 -1.6086 7.0441 0.5023 36 1 -3.3809 7.5018 -0.5243 37 1 -5.4610 8.7803 -0.8374 38 1 -5.7868 11.6963 -2.6440 39 1 -6.5307 13.0286 -0.8061 40 1 -7.2055 9.0997 -2.1620 41 1 -7.1173 9.7848 0.1707 42 1 -3.1908 12.2154 -1.9503 43 1 -1.1060 10.9471 -1.6287 44 1 3.1501 3.4464 -1.0458 45 1 1.5363 3.7515 -1.8228 46 1 4.1208 2.1321 -0.0105 47 1 5.3517 -0.0002 -0.0019 48 1 4.1203 -2.1327 0.0078 49 1 1.6582 -2.1327 0.0088 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:54 Heat of formation + Delta-G solvation = -19.083637 kcal Electronic energy + Delta-G solvation = -29505.145756 eV Core-core repulsion = 25365.001424 eV Total energy + Delta-G solvation = -4140.144332 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -41.84793 -41.33818 -40.36798 -39.18856 -38.52473 -37.19348 -34.73944 -33.81199 -32.51816 -31.88466 -31.70508 -29.65785 -27.93207 -26.84371 -26.35782 -25.95464 -24.16552 -23.19669 -22.35372 -21.92577 -21.75672 -20.21956 -19.54044 -18.52187 -18.33294 -17.75274 -17.48591 -17.23525 -16.91665 -16.71327 -16.49739 -16.02564 -15.69795 -15.64325 -15.53280 -15.14378 -15.01083 -14.93222 -14.52341 -14.42242 -14.09022 -14.04857 -13.88429 -13.81984 -13.57420 -13.50492 -13.40469 -13.33044 -12.89343 -12.79239 -12.47525 -12.18259 -12.13494 -12.00389 -11.84712 -11.81979 -11.61157 -11.27432 -10.95160 -10.34362 -10.22610 -10.06693 -9.69969 -9.47016 -9.22146 -5.00778 0.25114 0.27664 0.40152 0.46018 1.25701 1.36389 1.41790 1.59580 1.92924 2.48069 2.60935 2.76630 3.31869 3.35343 3.42082 3.55381 3.59649 3.64826 3.75757 3.79594 3.81031 3.86282 3.92086 3.92426 3.97481 4.04448 4.16868 4.21011 4.31795 4.35669 4.43770 4.50858 4.53166 4.61546 4.61603 4.63822 4.69897 4.73596 4.82247 4.87400 4.89458 4.90275 5.02117 5.12709 5.12922 5.20623 5.20635 5.40629 5.48256 5.58175 5.61687 5.64595 5.72887 6.09018 6.17706 6.31998 6.61242 7.03299 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.078 4.078 5 H 0.101 0.899 6 C -0.134 4.134 7 C 0.120 3.880 8 H 0.108 0.892 9 N -0.710 5.710 10 C 0.519 3.481 11 O -0.508 6.508 12 C 0.040 3.960 13 O -0.287 6.287 14 C 0.134 3.866 15 C -0.204 4.204 16 C -0.083 4.083 17 C -0.112 4.112 18 C -0.067 4.067 19 O -0.546 6.546 20 Si 0.682 3.318 21 C -0.047 4.047 22 C -0.143 4.143 23 C -0.143 4.143 24 C -0.113 4.113 25 C -0.123 4.123 26 C -0.119 4.119 27 C -0.119 4.119 28 H 0.071 0.929 29 H 0.068 0.932 30 H 0.066 0.934 31 H 0.077 0.923 32 H 0.100 0.900 33 H 0.402 0.598 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.131 0.869 37 H 0.121 0.879 38 H 0.074 0.926 39 H 0.382 0.618 40 H -0.256 1.256 41 H -0.252 1.252 42 H 0.137 0.863 43 H 0.139 0.861 44 H 0.097 0.903 45 H 0.074 0.926 46 H 0.123 0.877 47 H 0.122 0.878 48 H 0.121 0.879 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.526 -2.434 -0.016 6.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.096 4.096 5 H 0.119 0.881 6 C -0.172 4.172 7 C 0.015 3.985 8 H 0.126 0.874 9 N -0.364 5.364 10 C 0.304 3.696 11 O -0.382 6.382 12 C -0.039 4.039 13 O -0.199 6.199 14 C 0.088 3.912 15 C -0.223 4.223 16 C -0.100 4.100 17 C -0.113 4.113 18 C -0.177 4.177 19 O -0.353 6.353 20 Si 0.583 3.417 21 C -0.065 4.065 22 C -0.162 4.162 23 C -0.182 4.182 24 C -0.131 4.131 25 C -0.141 4.141 26 C -0.137 4.137 27 C -0.137 4.137 28 H 0.089 0.911 29 H 0.087 0.913 30 H 0.085 0.915 31 H 0.096 0.904 32 H 0.118 0.882 33 H 0.237 0.763 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.149 0.851 37 H 0.138 0.862 38 H 0.092 0.908 39 H 0.230 0.770 40 H -0.181 1.181 41 H -0.176 1.176 42 H 0.155 0.845 43 H 0.156 0.844 44 H 0.115 0.885 45 H 0.093 0.907 46 H 0.140 0.860 47 H 0.140 0.860 48 H 0.139 0.861 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -4.284 -2.911 0.205 5.184 hybrid contribution 0.025 -0.650 -0.012 0.651 sum -4.260 -3.561 0.193 5.556 Atomic orbital electron populations 1.20869 0.91377 1.02839 1.02420 1.19780 0.95985 0.92672 0.99881 1.19491 0.93466 0.93695 1.00666 1.21691 0.99760 0.90933 0.97197 0.88076 1.23416 1.03666 0.93777 0.96292 1.21925 0.85047 0.94781 0.96710 0.87444 1.45475 1.09034 1.11712 1.70181 1.20012 0.90483 0.81889 0.77240 1.90792 1.39193 1.60813 1.47371 1.22470 0.96197 0.83056 1.02209 1.86172 1.28459 1.22657 1.82593 1.19039 0.84464 0.91900 0.95761 1.21104 0.91704 1.01013 1.08493 1.20634 0.97404 0.93978 0.98016 1.19272 0.94337 0.93724 1.03922 1.24609 1.02603 0.94297 0.96237 1.86497 1.46447 1.39872 1.62434 0.95324 0.84711 0.80853 0.80771 1.20848 0.90275 0.99637 0.95757 1.20550 0.99825 0.91655 1.04132 1.23604 1.02195 0.94530 0.97870 1.20995 0.93582 0.98202 1.00315 1.21154 1.00009 0.92496 1.00426 1.21174 0.94340 0.98224 0.99987 1.21061 0.94362 0.97503 1.00796 0.91065 0.91312 0.91471 0.90447 0.88192 0.76312 0.88705 0.88685 0.85097 0.86212 0.90788 0.77046 1.18086 1.17622 0.84511 0.84363 0.88509 0.90686 0.85952 0.86021 0.86052 0.86086 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.19 9.51 36.01 0.34 0.53 16 2 C -0.08 -0.04 5.88 -104.63 -0.62 -0.65 16 3 C -0.07 -0.01 5.29 -104.63 -0.55 -0.56 16 4 C -0.08 0.13 3.57 -90.96 -0.33 -0.19 16 5 H 0.10 -0.28 5.75 -51.93 -0.30 -0.58 16 6 C -0.13 0.28 7.29 -25.92 -0.19 0.09 16 7 C 0.12 -0.10 4.33 -67.02 -0.29 -0.39 16 8 H 0.11 0.11 7.46 -51.93 -0.39 -0.27 16 9 N -0.71 1.09 5.26 -52.93 -0.28 0.81 16 10 C 0.52 0.85 7.91 -10.98 -0.09 0.77 16 11 O -0.51 -3.38 16.10 -14.36 -0.23 -3.61 16 12 C 0.04 -0.01 5.22 36.01 0.19 0.17 16 13 O -0.29 -1.02 9.67 -39.32 -0.38 -1.40 16 14 C 0.13 0.40 6.69 -39.22 -0.26 0.14 16 15 C -0.20 -0.32 9.04 -39.43 -0.36 -0.67 16 16 C -0.08 -0.18 8.66 -39.61 -0.34 -0.53 16 17 C -0.11 -0.27 5.42 -104.60 -0.57 -0.84 16 18 C -0.07 0.00 2.81 36.01 0.10 0.10 16 19 O -0.55 -0.14 12.74 -35.23 -0.45 -0.58 16 20 Si 0.68 -0.80 29.78 -169.99 -5.06 -5.86 16 21 C -0.05 -0.11 9.60 -39.60 -0.38 -0.49 16 22 C -0.14 -0.41 9.99 -39.43 -0.39 -0.80 16 23 C -0.14 0.14 7.27 -25.82 -0.19 -0.05 16 24 C -0.11 -0.04 8.54 -39.58 -0.34 -0.38 16 25 C -0.12 -0.08 10.05 -39.58 -0.40 -0.47 16 26 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 27 C -0.12 -0.09 9.70 -39.58 -0.38 -0.47 16 28 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.07 -0.17 6.02 -51.93 -0.31 -0.48 16 30 H 0.07 -0.12 8.09 -51.93 -0.42 -0.54 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.10 -0.19 7.64 -51.93 -0.40 -0.59 16 33 H 0.40 -1.87 8.70 -40.82 -0.36 -2.22 16 34 H 0.10 -0.28 7.65 -51.93 -0.40 -0.67 16 35 H 0.10 -0.26 7.67 -51.93 -0.40 -0.66 16 36 H 0.13 -0.18 6.30 -52.48 -0.33 -0.51 16 37 H 0.12 0.16 4.87 -52.48 -0.26 -0.10 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 39 H 0.38 -1.84 8.74 45.56 0.40 -1.44 16 40 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 41 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 42 H 0.14 0.12 8.06 -52.49 -0.42 -0.31 16 43 H 0.14 0.27 8.06 -52.49 -0.42 -0.15 16 44 H 0.10 -0.09 6.39 -51.93 -0.33 -0.43 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 46 H 0.12 -0.13 6.73 -52.49 -0.35 -0.48 16 47 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 48 H 0.12 -0.10 8.06 -52.49 -0.42 -0.53 16 49 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 LS Contribution 399.28 15.07 6.02 6.02 Total: 0.00 -10.32 399.28 -12.65 -22.98 By element: Atomic # 1 Polarization: -6.33 SS G_CDS: -6.83 Total: -13.17 kcal Atomic # 6 Polarization: 0.25 SS G_CDS: -5.44 Total: -5.18 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.28 Total: 0.81 kcal Atomic # 8 Polarization: -4.53 SS G_CDS: -1.06 Total: -5.59 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.06 Total: -5.86 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -10.32 -12.65 -22.98 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.892 kcal (2) G-P(sol) polarization free energy of solvation -10.322 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.976 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.084 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds