Wall clock time and date at job start Tue Mar 9 2021 13:17:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50691 * 1 3 3 C 1.38217 * 120.00200 * 2 1 4 4 C 1.50708 * 119.99434 * 359.97438 * 3 2 1 5 5 H 1.09000 * 112.85020 * 348.79894 * 4 3 2 6 6 C 1.53783 * 113.61476 * 119.99994 * 4 3 2 7 7 C 1.53779 * 87.07923 * 140.05865 * 6 4 3 8 8 H 1.08996 * 113.61637 * 219.93069 * 7 6 4 9 9 N 1.46508 * 113.61073 * 89.11942 * 7 6 4 10 10 C 1.34777 * 119.99997 * 154.99827 * 9 7 6 11 11 O 1.21284 * 119.99863 * 359.97438 * 10 9 7 12 12 C 1.50692 * 119.99847 * 179.97438 * 10 9 7 13 13 O 1.42905 * 109.47141 * 180.02562 * 12 10 9 14 14 C 1.35901 * 117.00063 * 180.02562 * 13 12 10 15 15 C 1.38713 * 120.05607 * 179.97438 * 14 13 12 16 16 C 1.38165 * 119.94238 * 179.97438 * 15 14 13 17 17 C 1.50699 * 119.96726 * 180.02562 * 16 15 14 18 18 O 1.42900 * 109.47071 * 299.99892 * 17 16 15 19 19 Si 1.86301 * 109.46997 * 180.02562 * 17 16 15 20 20 C 1.38244 * 120.05717 * 0.02562 * 16 15 14 21 21 C 1.38286 * 120.11199 * 359.97438 * 20 16 15 22 22 C 1.38119 * 120.05462 * 0.02562 * 21 20 16 23 23 C 1.53777 * 87.08253 * 334.56782 * 7 6 4 24 24 C 1.38259 * 120.00394 * 180.24870 * 3 2 1 25 25 C 1.38216 * 119.99549 * 359.53985 * 24 3 2 26 26 C 1.38248 * 120.00196 * 0.42083 * 25 24 3 27 27 C 1.38220 * 119.99846 * 359.80470 * 26 25 24 28 28 H 1.09005 * 109.47275 * 90.00227 * 1 2 3 29 29 H 1.09005 * 109.47190 * 209.99823 * 1 2 3 30 30 H 1.09003 * 109.47509 * 330.00133 * 1 2 3 31 31 H 1.09001 * 113.61296 * 25.50996 * 6 4 3 32 32 H 1.08999 * 113.61442 * 254.61607 * 6 4 3 33 33 H 0.97002 * 119.99482 * 334.99101 * 9 7 6 34 34 H 1.09007 * 109.47135 * 60.00262 * 12 10 9 35 35 H 1.08998 * 109.47587 * 300.00060 * 12 10 9 36 36 H 1.07994 * 120.02419 * 0.25672 * 15 14 13 37 37 H 1.08993 * 109.47201 * 59.99794 * 17 16 15 38 38 H 0.96705 * 114.00328 * 299.99762 * 18 17 16 39 39 H 1.48492 * 110.00316 * 58.67708 * 19 17 16 40 40 H 1.48502 * 110.00282 * 180.02562 * 19 17 16 41 41 H 1.07998 * 119.94034 * 179.97438 * 20 16 15 42 42 H 1.07999 * 119.97218 * 180.02562 * 21 20 16 43 43 H 1.08005 * 120.02406 * 179.97438 * 22 21 20 44 44 H 1.09004 * 113.61488 * 139.98285 * 23 7 6 45 45 H 1.09002 * 113.61568 * 270.88005 * 23 7 6 46 46 H 1.07993 * 119.99931 * 179.72399 * 24 3 2 47 47 H 1.07999 * 119.99612 * 180.20326 * 25 24 3 48 48 H 1.07997 * 120.00107 * 179.79031 * 26 25 24 49 49 H 1.08002 * 119.99620 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1980 1.1970 0.0000 4 6 1.4444 2.5021 -0.0006 5 1 0.3795 2.3759 -0.1961 6 6 1.7460 3.3881 1.2196 7 6 1.7267 4.5862 0.2557 8 1 2.4997 5.3261 0.4632 9 7 0.3991 5.1824 0.0872 10 6 0.2821 6.4729 -0.2835 11 8 1.2758 7.1407 -0.4771 12 6 -1.0835 7.0860 -0.4573 13 8 -0.9454 8.4528 -0.8510 14 6 -2.0910 9.1562 -1.0507 15 6 -2.0307 10.4880 -1.4335 16 6 -3.1968 11.2007 -1.6364 17 6 -3.1320 12.6476 -2.0529 18 8 -2.4364 13.3994 -1.0565 19 14 -4.8601 13.3174 -2.2416 20 6 -4.4230 10.5877 -1.4576 21 6 -4.4857 9.2600 -1.0760 22 6 -3.3229 8.5432 -0.8719 23 6 2.1029 3.5953 -0.8585 24 6 3.5806 1.1970 -0.0052 25 6 4.2717 0.0000 -0.0008 26 6 3.5804 -1.1973 0.0000 27 6 2.1982 -1.1972 0.0005 28 1 -0.3634 0.0000 -1.0277 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8900 0.5138 31 1 2.7235 3.2011 1.6641 32 1 0.9420 3.4065 1.9553 33 1 -0.3956 4.6483 0.2423 34 1 -1.6286 7.0323 0.4851 35 1 -1.6315 6.5407 -1.2256 36 1 -1.0731 10.9662 -1.5773 37 1 -2.6047 12.7288 -3.0033 38 1 -2.8503 13.3722 -0.1829 39 1 -5.5996 13.1833 -0.9609 40 1 -4.8101 14.7435 -2.6527 41 1 -5.3333 11.1467 -1.6163 42 1 -5.4448 8.7832 -0.9374 43 1 -3.3725 7.5064 -0.5734 44 1 1.5870 3.7810 -1.8006 45 1 3.1780 3.4649 -0.9822 46 1 4.1205 2.1323 -0.0097 47 1 5.3517 0.0001 -0.0015 48 1 4.1204 -2.1325 0.0001 49 1 1.6583 -2.1326 0.0007 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:17:27 Heat of formation + Delta-G solvation = -21.403468 kcal Electronic energy + Delta-G solvation = -29555.638900 eV Core-core repulsion = 25415.393973 eV Total energy + Delta-G solvation = -4140.244928 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.84515 -41.34322 -40.37749 -39.22506 -38.54235 -37.29236 -34.73131 -33.80455 -32.51731 -31.98631 -31.45161 -29.34469 -27.92202 -26.86013 -26.84066 -26.03993 -23.70463 -23.40697 -22.61539 -21.92151 -21.65296 -20.19937 -19.37486 -18.61804 -17.79880 -17.68499 -17.47617 -17.26102 -17.00585 -16.81919 -16.42824 -16.20120 -15.99675 -15.57613 -15.49615 -15.12504 -14.98185 -14.89872 -14.79137 -14.47833 -14.12880 -14.05078 -13.93747 -13.79289 -13.56418 -13.44839 -13.30143 -13.00404 -12.88184 -12.79761 -12.58498 -12.20020 -12.14350 -12.01347 -11.81483 -11.63470 -11.59941 -11.26942 -10.94096 -10.65463 -10.22066 -9.95571 -9.69798 -9.46244 -9.29688 -4.95476 0.17006 0.37594 0.40350 0.46485 1.24202 1.40523 1.42939 1.60553 1.96714 2.49485 2.63638 2.76691 3.32569 3.36998 3.41559 3.55858 3.60368 3.61823 3.71858 3.80302 3.84679 3.86660 3.93452 3.97892 3.98338 4.08024 4.16452 4.16940 4.33180 4.34758 4.50409 4.52619 4.53283 4.61528 4.62175 4.63867 4.70407 4.72855 4.82556 4.87407 4.90710 4.94313 5.02362 5.13437 5.20426 5.20775 5.32265 5.40116 5.41961 5.58679 5.61933 5.62221 5.72765 6.09383 6.19835 6.34210 6.41253 7.04474 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.077 4.077 5 H 0.101 0.899 6 C -0.134 4.134 7 C 0.121 3.879 8 H 0.107 0.893 9 N -0.710 5.710 10 C 0.518 3.482 11 O -0.509 6.509 12 C 0.041 3.959 13 O -0.288 6.288 14 C 0.129 3.871 15 C -0.120 4.120 16 C -0.078 4.078 17 C -0.077 4.077 18 O -0.527 6.527 19 Si 0.690 3.310 20 C -0.153 4.153 21 C -0.073 4.073 22 C -0.206 4.206 23 C -0.143 4.143 24 C -0.113 4.113 25 C -0.123 4.123 26 C -0.119 4.119 27 C -0.119 4.119 28 H 0.070 0.930 29 H 0.067 0.933 30 H 0.068 0.932 31 H 0.100 0.900 32 H 0.077 0.923 33 H 0.402 0.598 34 H 0.095 0.905 35 H 0.096 0.904 36 H 0.136 0.864 37 H 0.121 0.879 38 H 0.376 0.624 39 H -0.260 1.260 40 H -0.257 1.257 41 H 0.130 0.870 42 H 0.131 0.869 43 H 0.130 0.870 44 H 0.075 0.925 45 H 0.097 0.903 46 H 0.123 0.877 47 H 0.122 0.878 48 H 0.121 0.879 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.348 -5.669 0.393 7.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.073 4.073 4 C -0.095 4.095 5 H 0.119 0.881 6 C -0.172 4.172 7 C 0.015 3.985 8 H 0.125 0.875 9 N -0.364 5.364 10 C 0.303 3.697 11 O -0.382 6.382 12 C -0.038 4.038 13 O -0.200 6.200 14 C 0.083 3.917 15 C -0.139 4.139 16 C -0.079 4.079 17 C -0.187 4.187 18 O -0.334 6.334 19 Si 0.591 3.409 20 C -0.171 4.171 21 C -0.091 4.091 22 C -0.225 4.225 23 C -0.182 4.182 24 C -0.131 4.131 25 C -0.141 4.141 26 C -0.137 4.137 27 C -0.137 4.137 28 H 0.089 0.911 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.118 0.882 32 H 0.095 0.905 33 H 0.237 0.763 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.154 0.846 37 H 0.139 0.861 38 H 0.224 0.776 39 H -0.185 1.185 40 H -0.182 1.182 41 H 0.147 0.853 42 H 0.149 0.851 43 H 0.148 0.852 44 H 0.093 0.907 45 H 0.115 0.885 46 H 0.141 0.859 47 H 0.140 0.860 48 H 0.139 0.861 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -4.598 -4.367 0.001 6.341 hybrid contribution 0.011 -0.635 1.229 1.383 sum -4.587 -5.002 1.230 6.897 Atomic orbital electron populations 1.20855 0.91349 1.02851 1.02417 1.19782 0.95994 0.92658 0.99867 1.19499 0.93461 0.93689 1.00662 1.21663 0.99683 0.90924 0.97210 0.88123 1.23425 1.03728 0.93816 0.96256 1.21883 0.85123 0.94765 0.96689 0.87474 1.45476 1.08973 1.11143 1.70813 1.20036 0.90559 0.81931 0.77177 1.90796 1.38758 1.60845 1.47781 1.22453 0.96114 0.82878 1.02339 1.86177 1.28637 1.22108 1.83113 1.19043 0.84744 0.91757 0.96109 1.20275 0.99472 0.91039 1.03130 1.20106 0.92690 0.96194 0.98868 1.25109 1.10085 0.88910 0.94601 1.86621 1.52900 1.71875 1.21969 0.94931 0.76067 0.82603 0.87328 1.20944 0.96758 0.95800 1.03598 1.20903 0.97993 0.93691 0.96491 1.21297 0.92049 1.01057 1.08068 1.23568 1.02038 0.94502 0.98064 1.21003 0.93600 0.98202 1.00314 1.21154 1.00008 0.92501 1.00427 1.21174 0.94347 0.98220 0.99992 1.21062 0.94358 0.97514 1.00807 0.91100 0.91445 0.91331 0.88206 0.90461 0.76317 0.88725 0.88666 0.84587 0.86116 0.77600 1.18483 1.18179 0.85289 0.85075 0.85247 0.90660 0.88507 0.85942 0.86032 0.86064 0.86088 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.22 9.33 36.00 0.34 0.56 16 2 C -0.08 -0.02 5.88 -104.63 -0.62 -0.63 16 3 C -0.07 0.01 5.29 -104.62 -0.55 -0.55 16 4 C -0.08 0.15 3.40 -90.96 -0.31 -0.16 16 5 H 0.10 -0.31 6.08 -51.93 -0.32 -0.63 16 6 C -0.13 0.32 7.29 -25.92 -0.19 0.13 16 7 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 8 H 0.11 0.09 7.46 -51.93 -0.39 -0.30 16 9 N -0.71 1.40 5.26 -53.02 -0.28 1.12 16 10 C 0.52 0.62 7.91 -10.99 -0.09 0.53 16 11 O -0.51 -3.25 16.10 -14.36 -0.23 -3.48 16 12 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 13 O -0.29 -0.85 9.67 -39.34 -0.38 -1.23 16 14 C 0.13 0.24 6.69 -39.21 -0.26 -0.02 16 15 C -0.12 -0.27 9.55 -39.43 -0.38 -0.65 16 16 C -0.08 -0.06 5.39 -104.65 -0.56 -0.62 16 17 C -0.08 -0.02 2.82 36.01 0.10 0.08 16 18 O -0.53 -1.01 12.77 -35.23 -0.45 -1.46 16 19 Si 0.69 -0.63 29.79 -169.99 -5.06 -5.69 16 20 C -0.15 0.08 8.67 -39.56 -0.34 -0.26 16 21 C -0.07 0.08 10.04 -39.61 -0.40 -0.32 16 22 C -0.21 0.11 9.04 -39.43 -0.36 -0.25 16 23 C -0.14 0.18 7.25 -25.92 -0.19 -0.01 16 24 C -0.11 -0.02 8.63 -39.58 -0.34 -0.36 16 25 C -0.12 -0.06 10.05 -39.59 -0.40 -0.45 16 26 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 27 C -0.12 -0.06 9.70 -39.58 -0.38 -0.45 16 28 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 29 H 0.07 -0.15 8.09 -51.93 -0.42 -0.57 16 30 H 0.07 -0.20 6.34 -51.93 -0.33 -0.53 16 31 H 0.10 -0.21 7.73 -51.93 -0.40 -0.61 16 32 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.40 -2.07 8.70 -40.82 -0.36 -2.43 16 34 H 0.09 -0.35 7.66 -51.92 -0.40 -0.75 16 35 H 0.10 -0.36 7.66 -51.93 -0.40 -0.76 16 36 H 0.14 0.41 8.06 -52.49 -0.42 -0.01 16 37 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 38 H 0.38 -0.38 8.70 45.56 0.40 0.02 16 39 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 40 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 41 H 0.13 -0.30 4.87 -52.49 -0.26 -0.56 16 42 H 0.13 -0.44 8.06 -52.49 -0.42 -0.87 16 43 H 0.13 -0.42 6.30 -52.48 -0.33 -0.75 16 44 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 45 H 0.10 -0.12 6.31 -51.93 -0.33 -0.45 16 46 H 0.12 -0.15 6.65 -52.49 -0.35 -0.50 16 47 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 48 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 49 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 LS Contribution 399.54 15.07 6.02 6.02 Total: 0.00 -9.74 399.54 -12.67 -22.42 By element: Atomic # 1 Polarization: -6.67 SS G_CDS: -6.86 Total: -13.53 kcal Atomic # 6 Polarization: 1.26 SS G_CDS: -5.43 Total: -4.17 kcal Atomic # 7 Polarization: 1.40 SS G_CDS: -0.28 Total: 1.12 kcal Atomic # 8 Polarization: -5.11 SS G_CDS: -1.06 Total: -6.17 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.06 Total: -5.69 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.74 -12.67 -22.42 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.012 kcal (2) G-P(sol) polarization free energy of solvation -9.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.415 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds