Wall clock time and date at job start Tue Mar 9 2021 13:17:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38211 * 120.00172 * 2 1 4 4 C 1.50699 * 120.00199 * 359.97438 * 3 2 1 5 5 H 1.09004 * 112.90280 * 10.98531 * 4 3 2 6 6 C 1.53780 * 113.61363 * 142.23197 * 4 3 2 7 7 C 1.53786 * 87.07830 * 139.98539 * 6 4 3 8 8 H 1.09001 * 113.68967 * 220.00606 * 7 6 4 9 9 N 1.46503 * 113.61465 * 89.11756 * 7 6 4 10 10 C 1.34778 * 119.99797 * 107.49862 * 9 7 6 11 11 O 1.21688 * 120.00252 * 354.91085 * 10 9 7 12 12 C 1.46677 * 119.99704 * 174.90732 * 10 9 7 13 13 C 1.37885 * 126.22260 * 4.63824 * 12 10 9 14 14 C 1.39882 * 107.09042 * 179.88256 * 13 12 10 15 15 Br 1.89095 * 126.07423 * 180.10706 * 14 13 12 16 16 C 1.35509 * 107.84960 * 0.38018 * 14 13 12 17 17 C 1.50699 * 125.56907 * 179.78711 * 16 14 13 18 18 O 1.42905 * 109.46998 * 245.81950 * 17 16 14 19 19 Si 1.86295 * 109.47198 * 125.82138 * 17 16 14 20 20 N 1.35594 * 108.85979 * 359.76427 * 16 14 13 21 21 C 1.46501 * 125.67996 * 180.02562 * 20 16 14 22 22 C 1.53775 * 87.08006 * 334.56726 * 7 6 4 23 23 C 1.38262 * 119.99685 * 179.72618 * 3 2 1 24 24 C 1.38202 * 120.00157 * 0.24951 * 23 3 2 25 25 C 1.38261 * 120.00293 * 0.02562 * 24 23 3 26 26 C 1.38217 * 119.99575 * 359.95409 * 25 24 23 27 27 H 1.09001 * 109.47032 * 90.00059 * 1 2 3 28 28 H 1.09005 * 109.47328 * 210.00366 * 1 2 3 29 29 H 1.09001 * 109.47044 * 330.00078 * 1 2 3 30 30 H 1.09001 * 113.61587 * 25.43557 * 6 4 3 31 31 H 1.09000 * 113.68705 * 254.54242 * 6 4 3 32 32 H 0.96995 * 119.99642 * 287.50424 * 9 7 6 33 33 H 1.07994 * 126.45880 * 0.02562 * 13 12 10 34 34 H 1.09005 * 109.46945 * 5.81937 * 17 16 14 35 35 H 0.96703 * 113.99938 * 300.00310 * 18 17 16 36 36 H 1.48502 * 110.00091 * 184.87786 * 19 17 16 37 37 H 1.48504 * 110.00136 * 306.19686 * 19 17 16 38 38 H 1.08994 * 109.47342 * 264.38077 * 21 20 16 39 39 H 1.08999 * 109.46756 * 24.38209 * 21 20 16 40 40 H 1.09002 * 109.47185 * 144.37394 * 21 20 16 41 41 H 1.09001 * 113.61390 * 139.98422 * 22 7 6 42 42 H 1.09005 * 113.61714 * 270.88302 * 22 7 6 43 43 H 1.08007 * 119.99365 * 180.27040 * 23 3 2 44 44 H 1.08003 * 119.99809 * 180.02562 * 24 23 3 45 45 H 1.08001 * 119.99963 * 179.97438 * 25 24 23 46 46 H 1.07999 * 119.99340 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4447 2.5021 -0.0006 5 1 0.3788 2.3767 0.1904 6 6 2.1010 3.5926 0.8624 7 6 1.7304 4.5864 -0.2512 8 1 2.5051 5.3258 -0.4539 9 7 0.4029 5.1838 -0.0866 10 6 0.2860 6.4737 0.2865 11 8 1.2783 7.1156 0.5763 12 6 -1.0374 7.1036 0.3431 13 6 -2.2475 6.4777 0.1306 14 6 -3.2443 7.4469 0.2848 15 35 -5.1063 7.1663 0.1122 16 6 -2.6381 8.6238 0.5739 17 6 -3.3400 9.9356 0.8141 18 8 -3.0032 10.8539 -0.2278 19 14 -2.8041 10.6351 2.4555 20 7 -1.2969 8.4283 0.6121 21 6 -0.2912 9.4558 0.8935 22 6 1.7522 3.3904 -1.2175 23 6 3.5807 1.1968 0.0057 24 6 4.2716 -0.0001 0.0062 25 6 3.5803 -1.1975 0.0005 26 6 2.1982 -1.1974 -0.0048 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3634 -0.8900 0.5139 29 1 -0.3633 0.8900 0.5138 30 1 3.1755 3.4606 0.9901 31 1 1.5825 3.7777 1.8032 32 1 -0.3918 4.6511 -0.2461 33 1 -2.3977 5.4351 -0.1074 34 1 -4.4180 9.7747 0.8222 35 1 -2.0574 11.0442 -0.2938 36 1 -3.5753 11.8675 2.7586 37 1 -3.0116 9.6294 3.5284 38 1 0.0909 9.8570 -0.0452 39 1 -0.7451 10.2590 1.4739 40 1 0.5287 9.0159 1.4612 41 1 0.9511 3.4114 -1.9564 42 1 2.7313 3.2031 -1.6586 43 1 4.1207 2.1322 0.0101 44 1 5.3517 -0.0001 0.0111 45 1 4.1204 -2.1328 0.0005 46 1 1.6582 -2.1327 -0.0089 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:17:48 Heat of formation + Delta-G solvation = 45.219771 kcal Electronic energy + Delta-G solvation = -29356.706041 eV Core-core repulsion = 25261.014532 eV Total energy + Delta-G solvation = -4095.691508 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.073 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -42.91858 -41.53380 -40.19969 -38.70567 -37.86390 -35.07237 -34.25625 -33.70810 -32.31132 -31.48009 -30.88305 -27.92149 -27.39221 -27.25484 -26.67738 -25.81523 -23.58421 -22.85421 -21.88438 -21.73801 -20.65411 -20.02230 -19.02013 -18.08908 -17.74302 -17.20390 -17.03847 -16.75921 -16.50064 -16.04412 -15.96047 -15.66261 -15.51654 -14.92317 -14.85536 -14.73752 -14.40864 -14.37944 -14.35980 -14.23406 -13.95180 -13.72607 -13.58531 -13.39691 -13.23703 -13.15964 -12.94741 -12.80465 -12.68388 -12.36619 -12.03180 -11.94283 -11.69413 -11.50563 -11.34237 -11.15056 -11.09818 -10.82000 -10.19694 -9.81989 -9.65574 -9.40669 -9.31169 -5.22553 0.12430 0.45189 0.50075 0.60383 0.90143 1.16173 1.40305 1.52663 1.81323 2.13979 2.22764 2.82151 3.18534 3.42330 3.47764 3.51055 3.70224 3.71943 3.75268 3.89327 3.96839 4.03765 4.08299 4.19918 4.24452 4.27317 4.31442 4.39802 4.43479 4.60364 4.60786 4.63205 4.71866 4.78073 4.83333 4.84656 4.88717 4.95787 5.02201 5.04469 5.16142 5.21284 5.23603 5.34757 5.50714 5.55337 5.65098 5.66030 5.80742 5.81089 6.16307 6.39136 6.46781 7.04002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.096 4.096 3 C -0.080 4.080 4 C -0.072 4.072 5 H 0.112 0.888 6 C -0.142 4.142 7 C 0.124 3.876 8 H 0.095 0.905 9 N -0.688 5.688 10 C 0.596 3.404 11 O -0.566 6.566 12 C -0.043 4.043 13 C -0.106 4.106 14 C -0.181 4.181 15 Br -0.028 7.028 16 C 0.047 3.953 17 C -0.054 4.054 18 O -0.539 6.539 19 Si 0.751 3.249 20 N -0.395 5.395 21 C 0.053 3.947 22 C -0.124 4.124 23 C -0.122 4.122 24 C -0.137 4.137 25 C -0.134 4.134 26 C -0.135 4.135 27 H 0.077 0.923 28 H 0.067 0.933 29 H 0.078 0.922 30 H 0.097 0.903 31 H 0.066 0.934 32 H 0.415 0.585 33 H 0.177 0.823 34 H 0.125 0.875 35 H 0.391 0.609 36 H -0.268 1.268 37 H -0.285 1.285 38 H 0.112 0.888 39 H 0.108 0.892 40 H 0.109 0.891 41 H 0.087 0.913 42 H 0.101 0.899 43 H 0.134 0.866 44 H 0.132 0.868 45 H 0.130 0.870 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.736 -0.722 -0.671 2.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.096 4.096 3 C -0.080 4.080 4 C -0.090 4.090 5 H 0.130 0.870 6 C -0.180 4.180 7 C 0.019 3.981 8 H 0.113 0.887 9 N -0.339 5.339 10 C 0.384 3.616 11 O -0.447 6.447 12 C -0.157 4.157 13 C -0.133 4.133 14 C -0.267 4.267 15 Br 0.056 6.944 16 C -0.074 4.074 17 C -0.164 4.164 18 O -0.346 6.346 19 Si 0.652 3.348 20 N -0.068 5.068 21 C -0.085 4.085 22 C -0.162 4.162 23 C -0.140 4.140 24 C -0.155 4.155 25 C -0.152 4.152 26 C -0.153 4.153 27 H 0.096 0.904 28 H 0.086 0.914 29 H 0.097 0.903 30 H 0.115 0.885 31 H 0.085 0.915 32 H 0.253 0.747 33 H 0.194 0.806 34 H 0.142 0.858 35 H 0.240 0.760 36 H -0.194 1.194 37 H -0.211 1.211 38 H 0.130 0.870 39 H 0.126 0.874 40 H 0.128 0.872 41 H 0.106 0.894 42 H 0.119 0.881 43 H 0.152 0.848 44 H 0.150 0.850 45 H 0.148 0.852 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.196 0.096 0.216 2.208 hybrid contribution -0.446 -0.959 -0.230 1.083 sum 1.750 -0.863 -0.014 1.951 Atomic orbital electron populations 1.20907 0.90134 1.03428 1.03002 1.20085 0.97107 0.92738 0.99634 1.19714 0.93624 0.94360 1.00317 1.21696 1.00075 0.89938 0.97280 0.87000 1.23553 1.02060 0.94722 0.97702 1.21850 0.84457 0.94603 0.97213 0.88677 1.45216 1.09665 1.10289 1.68706 1.16860 0.86056 0.82216 0.76472 1.90807 1.39348 1.64049 1.50489 1.20015 0.94379 0.84946 1.16358 1.21504 0.88647 1.00209 1.02958 1.20995 0.91532 0.96286 1.17886 1.96659 1.03502 1.96726 1.97496 1.20849 0.83176 0.97458 1.05928 1.24955 1.02211 0.85663 1.03575 1.86595 1.31412 1.62391 1.54203 0.94396 0.89902 0.78604 0.71873 1.43903 1.05341 1.08213 1.49373 1.22786 0.91002 0.89677 1.05057 1.23365 1.04165 0.92560 0.96105 1.21218 0.93945 0.98618 1.00214 1.21389 1.00746 0.92697 1.00685 1.21401 0.94661 0.98842 1.00279 1.21296 0.94648 0.98201 1.01164 0.90416 0.91363 0.90314 0.88470 0.91475 0.74728 0.80585 0.85787 0.75951 1.19422 1.21139 0.86979 0.87429 0.87247 0.89436 0.88085 0.84803 0.85005 0.85170 0.85311 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.42 9.53 71.24 0.68 1.09 16 2 C -0.10 -0.07 5.88 -19.87 -0.12 -0.19 16 3 C -0.08 0.02 5.29 -19.87 -0.11 -0.08 16 4 C -0.07 0.32 3.57 -11.02 -0.04 0.28 16 5 H 0.11 -0.74 5.76 -2.39 -0.01 -0.75 16 6 C -0.14 0.45 7.25 31.12 0.23 0.68 16 7 C 0.12 -0.42 4.29 45.52 0.20 -0.23 16 8 H 0.10 -0.03 7.53 -2.39 -0.02 -0.05 16 9 N -0.69 2.46 5.25 -444.00 -2.33 0.13 16 10 C 0.60 0.96 7.77 86.45 0.67 1.63 16 11 O -0.57 -3.88 14.41 -4.31 -0.06 -3.94 16 12 C -0.04 -0.04 6.89 40.35 0.28 0.24 16 13 C -0.11 -0.01 10.34 22.58 0.23 0.23 16 14 C -0.18 -0.61 6.53 22.04 0.14 -0.46 16 15 Br -0.03 -0.11 33.06 -20.37 -0.67 -0.78 16 16 C 0.05 0.08 5.31 41.35 0.22 0.30 16 17 C -0.05 -0.02 2.87 71.24 0.20 0.18 16 18 O -0.54 0.26 12.88 -148.98 -1.92 -1.66 16 19 Si 0.75 -1.41 29.16 68.60 2.00 0.59 16 20 N -0.39 0.14 3.10 -519.61 -1.61 -1.46 16 21 C 0.05 -0.35 8.98 127.77 1.15 0.80 16 22 C -0.12 0.72 7.29 31.12 0.23 0.94 16 23 C -0.12 -0.02 8.61 22.27 0.19 0.17 16 24 C -0.14 -0.16 10.05 22.27 0.22 0.07 16 25 C -0.13 -0.23 10.05 22.27 0.22 0.00 16 26 C -0.14 -0.23 9.70 22.27 0.22 -0.01 16 27 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 28 H 0.07 -0.26 8.09 -2.38 -0.02 -0.27 16 29 H 0.08 -0.44 5.99 -2.39 -0.01 -0.45 16 30 H 0.10 -0.32 6.31 -2.39 -0.02 -0.33 16 31 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.42 -3.40 7.60 -92.71 -0.70 -4.10 16 33 H 0.18 -0.98 7.45 -2.91 -0.02 -1.01 16 34 H 0.12 0.32 6.96 -2.38 -0.02 0.30 16 35 H 0.39 -3.50 7.56 -74.05 -0.56 -4.06 16 36 H -0.27 -0.90 7.11 99.48 0.71 -0.20 16 37 H -0.28 -1.40 7.11 99.48 0.71 -0.69 16 38 H 0.11 -1.10 8.14 -2.39 -0.02 -1.12 16 39 H 0.11 -1.27 3.72 -2.39 -0.01 -1.28 16 40 H 0.11 -0.43 6.54 -2.39 -0.02 -0.44 16 41 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 42 H 0.10 -0.56 7.72 -2.38 -0.02 -0.57 16 43 H 0.13 -0.41 6.66 -2.91 -0.02 -0.43 16 44 H 0.13 -0.27 8.06 -2.91 -0.02 -0.29 16 45 H 0.13 -0.17 8.06 -2.91 -0.02 -0.20 16 46 H 0.13 -0.13 8.06 -2.91 -0.02 -0.15 16 Total: 0.00 -18.76 386.90 0.05 -18.71 By element: Atomic # 1 Polarization: -17.04 SS G_CDS: -0.18 Total: -17.22 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: 4.82 Total: 5.63 kcal Atomic # 7 Polarization: 2.61 SS G_CDS: -3.94 Total: -1.33 kcal Atomic # 8 Polarization: -3.62 SS G_CDS: -1.98 Total: -5.60 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: 2.00 Total: 0.59 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -0.67 Total: -0.78 kcal Total: -18.76 0.05 -18.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.931 kcal (2) G-P(sol) polarization free energy of solvation -18.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.046 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.712 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds