Wall clock time and date at job start Tue Mar 9 2021 13:18:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38215 * 120.00248 * 2 1 4 4 C 1.50701 * 119.99815 * 359.72401 * 3 2 1 5 5 H 1.09004 * 112.85091 * 348.80679 * 4 3 2 6 6 C 1.53777 * 113.61500 * 119.99778 * 4 3 2 7 7 C 1.53780 * 87.08033 * 139.98152 * 6 4 3 8 8 H 1.09000 * 113.61142 * 220.01793 * 7 6 4 9 9 N 1.46504 * 113.61204 * 89.20678 * 7 6 4 10 10 C 1.34773 * 119.99904 * 155.00103 * 9 7 6 11 11 O 1.21278 * 120.00236 * 359.97438 * 10 9 7 12 12 C 1.50703 * 119.99787 * 179.97438 * 10 9 7 13 13 O 1.42896 * 109.47331 * 180.02562 * 12 10 9 14 14 C 1.35913 * 117.00543 * 180.02562 * 13 12 10 15 15 C 1.38784 * 120.06123 * 179.72378 * 14 13 12 16 16 Br 1.89098 * 120.03635 * 0.02562 * 15 14 13 17 17 C 1.38237 * 119.92529 * 179.77046 * 15 14 13 18 18 C 1.38241 * 120.05080 * 0.48023 * 17 15 14 19 19 C 1.50701 * 119.94638 * 179.76812 * 18 17 15 20 20 O 1.42900 * 109.47253 * 245.02345 * 19 18 17 21 21 Si 1.86301 * 109.46789 * 5.02606 * 19 18 17 22 22 C 1.38282 * 120.11288 * 359.79345 * 18 17 15 23 23 C 1.38146 * 120.07480 * 359.95380 * 22 18 17 24 24 C 1.53776 * 113.61476 * 217.49878 * 4 3 2 25 25 C 1.38253 * 120.00294 * 179.70563 * 3 2 1 26 26 C 1.38220 * 120.00051 * 0.02562 * 25 3 2 27 27 C 1.38255 * 119.99697 * 359.95697 * 26 25 3 28 28 C 1.38217 * 120.00132 * 0.07194 * 27 26 25 29 29 H 1.09000 * 109.47344 * 89.99954 * 1 2 3 30 30 H 1.09003 * 109.46871 * 209.99884 * 1 2 3 31 31 H 1.09006 * 109.46644 * 329.99467 * 1 2 3 32 32 H 1.09005 * 113.61743 * 254.53410 * 6 4 3 33 33 H 1.08999 * 113.61222 * 25.43685 * 6 4 3 34 34 H 0.96997 * 119.99626 * 334.99320 * 9 7 6 35 35 H 1.09003 * 109.47225 * 299.99833 * 12 10 9 36 36 H 1.08995 * 109.47260 * 59.99753 * 12 10 9 37 37 H 1.08003 * 119.98002 * 180.22860 * 17 15 14 38 38 H 1.09006 * 109.46938 * 125.02310 * 19 18 17 39 39 H 0.96696 * 113.99869 * 59.99951 * 20 19 18 40 40 H 1.48494 * 110.00399 * 58.68022 * 21 19 18 41 41 H 1.48502 * 109.99642 * 179.97438 * 21 19 18 42 42 H 1.08005 * 119.96493 * 179.97438 * 22 18 17 43 43 H 1.07995 * 120.02514 * 180.02562 * 23 22 18 44 44 H 1.08992 * 113.61626 * 334.56900 * 24 4 3 45 45 H 1.08999 * 113.61663 * 105.47516 * 24 4 3 46 46 H 1.08002 * 120.00348 * 180.02562 * 25 3 2 47 47 H 1.07999 * 120.00153 * 179.97438 * 26 25 3 48 48 H 1.08005 * 119.99804 * 179.97438 * 27 26 25 49 49 H 1.08001 * 119.99701 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4447 2.5021 -0.0063 5 1 0.3805 2.3755 -0.2054 6 6 1.7417 3.3907 1.2131 7 6 1.7282 4.5864 0.2462 8 1 2.5020 5.3252 0.4546 9 7 0.4024 5.1851 0.0717 10 6 0.2894 6.4748 -0.3025 11 8 1.2852 7.1401 -0.4944 12 6 -1.0743 7.0904 -0.4826 13 8 -0.9320 8.4559 -0.8791 14 6 -2.0754 9.1613 -1.0845 15 6 -2.0111 10.4942 -1.4656 16 35 -0.3319 11.3314 -1.7006 17 6 -3.1758 11.2077 -1.6783 18 6 -4.4035 10.5972 -1.5021 19 6 -5.6718 11.3787 -1.7296 20 8 -6.3808 11.5060 -0.4954 21 14 -5.2493 13.0723 -2.3807 22 6 -4.4699 9.2708 -1.1169 23 6 -3.3090 8.5517 -0.9080 24 6 2.1083 3.5924 -0.8639 25 6 3.5807 1.1970 0.0062 26 6 4.2718 0.0000 0.0118 27 6 3.5805 -1.1973 0.0121 28 6 2.1983 -1.1973 0.0054 29 1 -0.3634 0.0000 -1.0276 30 1 -0.3633 -0.8900 0.5138 31 1 -0.3633 0.8900 0.5140 32 1 0.9342 3.4118 1.9451 33 1 2.7169 3.2036 1.6625 34 1 -0.3939 4.6530 0.2254 35 1 -1.6209 6.5443 -1.2515 36 1 -1.6227 7.0401 0.4580 37 1 -3.1267 12.2440 -1.9785 38 1 -6.2956 10.8559 -2.4547 39 1 -5.8847 11.9626 0.1978 40 1 -4.4841 12.9531 -3.6477 41 1 -6.4917 13.8529 -2.6098 42 1 -5.4304 8.7963 -0.9795 43 1 -3.3617 7.5157 -0.6076 44 1 3.1837 3.4604 -0.9823 45 1 1.5969 3.7765 -1.8086 46 1 4.1207 2.1323 0.0066 47 1 5.3518 0.0000 0.0162 48 1 4.1205 -2.1327 0.0161 49 1 1.6583 -2.1327 0.0052 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:07 Heat of formation + Delta-G solvation = -11.480533 kcal Electronic energy + Delta-G solvation = -31720.340385 eV Core-core repulsion = 27240.707746 eV Total energy + Delta-G solvation = -4479.632640 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.077 amu Computer time = 5.40 seconds Orbital eigenvalues (eV) -41.84710 -41.40925 -40.41739 -39.28422 -38.58969 -37.19700 -34.73198 -33.72231 -33.48691 -32.16261 -31.72704 -30.45018 -29.47479 -27.81185 -26.71130 -26.45803 -25.92394 -24.12187 -23.12127 -22.45677 -21.87760 -21.79882 -20.13277 -19.51647 -18.60428 -18.09737 -17.71280 -17.48720 -17.18027 -16.83496 -16.49387 -16.43363 -15.99914 -15.93413 -15.64345 -15.62049 -15.30721 -14.97719 -14.80579 -14.77033 -14.44849 -14.28529 -14.08580 -13.96398 -13.92218 -13.53775 -13.43147 -13.42475 -13.12833 -12.82092 -12.72755 -12.40034 -12.27786 -12.17697 -12.06154 -11.87772 -11.85538 -11.71426 -11.52430 -11.19648 -11.17641 -11.01990 -10.45349 -10.17252 -9.99297 -9.67402 -9.41473 -9.31550 -5.03173 -0.03039 0.08683 0.43245 0.48389 0.64394 1.28792 1.38247 1.43114 1.59853 1.93454 2.40179 2.48240 2.79885 3.45866 3.46795 3.49537 3.57659 3.67887 3.72313 3.79669 3.83767 3.93132 4.02549 4.03104 4.06946 4.08418 4.09328 4.20541 4.25576 4.34540 4.44266 4.45509 4.58992 4.62703 4.64426 4.75781 4.79117 4.81838 4.82705 4.85774 4.94668 5.00934 5.01482 5.03701 5.14069 5.20105 5.30604 5.33727 5.45159 5.50803 5.63866 5.64508 5.78299 6.05584 6.14772 6.43843 6.77537 7.12822 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.094 4.094 3 C -0.081 4.081 4 C -0.067 4.067 5 H 0.119 0.881 6 C -0.123 4.123 7 C 0.119 3.881 8 H 0.082 0.918 9 N -0.691 5.691 10 C 0.515 3.485 11 O -0.566 6.566 12 C 0.034 3.966 13 O -0.304 6.304 14 C 0.150 3.850 15 C -0.140 4.140 16 Br -0.049 7.049 17 C -0.054 4.054 18 C -0.152 4.152 19 C -0.052 4.052 20 O -0.550 6.550 21 Si 0.742 3.258 22 C -0.034 4.034 23 C -0.195 4.195 24 C -0.144 4.144 25 C -0.124 4.124 26 C -0.139 4.139 27 C -0.134 4.134 28 C -0.135 4.135 29 H 0.075 0.925 30 H 0.070 0.930 31 H 0.083 0.917 32 H 0.093 0.907 33 H 0.095 0.905 34 H 0.421 0.579 35 H 0.129 0.871 36 H 0.132 0.868 37 H 0.148 0.852 38 H 0.119 0.881 39 H 0.396 0.604 40 H -0.289 1.289 41 H -0.292 1.292 42 H 0.156 0.844 43 H 0.173 0.827 44 H 0.091 0.909 45 H 0.068 0.932 46 H 0.130 0.870 47 H 0.130 0.870 48 H 0.130 0.870 49 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.176 -5.320 3.741 8.312 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.094 4.094 3 C -0.081 4.081 4 C -0.085 4.085 5 H 0.137 0.863 6 C -0.161 4.161 7 C 0.013 3.987 8 H 0.101 0.899 9 N -0.346 5.346 10 C 0.301 3.699 11 O -0.444 6.444 12 C -0.044 4.044 13 O -0.216 6.216 14 C 0.102 3.898 15 C -0.220 4.220 16 Br 0.036 6.964 17 C -0.073 4.073 18 C -0.154 4.154 19 C -0.164 4.164 20 O -0.358 6.358 21 Si 0.649 3.351 22 C -0.052 4.052 23 C -0.214 4.214 24 C -0.182 4.182 25 C -0.142 4.142 26 C -0.157 4.157 27 C -0.151 4.151 28 C -0.153 4.153 29 H 0.093 0.907 30 H 0.089 0.911 31 H 0.101 0.899 32 H 0.111 0.889 33 H 0.114 0.886 34 H 0.260 0.740 35 H 0.147 0.853 36 H 0.150 0.850 37 H 0.165 0.835 38 H 0.136 0.864 39 H 0.246 0.754 40 H -0.216 1.216 41 H -0.220 1.220 42 H 0.173 0.827 43 H 0.191 0.809 44 H 0.109 0.891 45 H 0.087 0.913 46 H 0.147 0.853 47 H 0.148 0.852 48 H 0.148 0.852 49 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -4.160 -4.204 2.522 6.429 hybrid contribution -0.274 -1.070 -0.308 1.147 sum -4.434 -5.274 2.214 7.237 Atomic orbital electron populations 1.20902 0.89797 1.03768 1.02934 1.20108 0.97298 0.92551 0.99434 1.19723 0.93487 0.94504 1.00342 1.21666 1.00223 0.89651 0.96948 0.86349 1.23352 1.04158 0.92424 0.96174 1.21803 0.85165 0.94385 0.97348 0.89938 1.45310 1.09455 1.10520 1.69275 1.20507 0.90827 0.82299 0.76262 1.90791 1.40537 1.62449 1.50620 1.22829 0.95291 0.81070 1.05182 1.86241 1.28637 1.24158 1.82610 1.18805 0.86283 0.90081 0.94667 1.21140 0.92771 0.94102 1.14015 1.96777 1.24006 1.79256 1.96373 1.20909 0.90004 0.99565 0.96810 1.20299 0.94106 0.96251 1.04709 1.24825 0.92390 1.07767 0.91413 1.86476 1.44616 1.81907 1.22830 0.94020 0.79999 0.77571 0.83502 1.21220 0.99187 0.92494 0.92308 1.21609 0.89893 1.02840 1.07014 1.23545 1.01826 0.94985 0.97883 1.21211 0.94176 0.98468 1.00375 1.21379 1.00686 0.92775 1.00811 1.21400 0.94775 0.98729 1.00243 1.21320 0.94563 0.98327 1.01081 0.90675 0.91141 0.89851 0.88874 0.88650 0.74049 0.85309 0.85027 0.83529 0.86416 0.75412 1.21637 1.21995 0.82680 0.80927 0.89080 0.91301 0.85252 0.85222 0.85174 0.85131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.64 9.32 71.24 0.66 1.31 16 2 C -0.09 0.03 5.88 -19.86 -0.12 -0.09 16 3 C -0.08 0.06 5.29 -19.87 -0.11 -0.05 16 4 C -0.07 0.36 3.41 -11.02 -0.04 0.32 16 5 H 0.12 -1.06 6.09 -2.38 -0.01 -1.08 16 6 C -0.12 0.75 7.29 31.12 0.23 0.98 16 7 C 0.12 -0.32 4.32 45.52 0.20 -0.13 16 8 H 0.08 0.24 7.46 -2.39 -0.02 0.22 16 9 N -0.69 4.02 5.27 -440.04 -2.32 1.70 16 10 C 0.51 0.53 7.91 87.66 0.69 1.22 16 11 O -0.57 -7.53 16.10 16.01 0.26 -7.27 16 12 C 0.03 -0.19 5.22 71.24 0.37 0.19 16 13 O -0.30 -1.21 9.00 -73.54 -0.66 -1.87 16 14 C 0.15 0.24 6.68 22.52 0.15 0.39 16 15 C -0.14 -0.57 6.24 22.40 0.14 -0.43 16 16 Br -0.05 -0.38 33.16 -20.37 -0.68 -1.06 16 17 C -0.05 -0.01 8.40 22.27 0.19 0.17 16 18 C -0.15 0.37 5.35 -19.85 -0.11 0.26 16 19 C -0.05 0.16 2.80 71.24 0.20 0.36 16 20 O -0.55 1.65 12.83 -148.98 -1.91 -0.26 16 21 Si 0.74 -1.36 29.80 68.60 2.04 0.69 16 22 C -0.03 0.16 9.68 22.26 0.22 0.37 16 23 C -0.19 0.98 9.04 22.36 0.20 1.18 16 24 C -0.14 0.38 7.26 31.12 0.23 0.61 16 25 C -0.12 -0.09 8.61 22.27 0.19 0.10 16 26 C -0.14 -0.22 10.05 22.27 0.22 0.01 16 27 C -0.13 -0.21 10.05 22.27 0.22 0.01 16 28 C -0.13 -0.14 9.70 22.27 0.22 0.08 16 29 H 0.07 -0.46 8.14 -2.39 -0.02 -0.48 16 30 H 0.07 -0.41 8.08 -2.39 -0.02 -0.43 16 31 H 0.08 -0.72 6.35 -2.38 -0.02 -0.73 16 32 H 0.09 -0.82 8.14 -2.38 -0.02 -0.84 16 33 H 0.10 -0.45 7.72 -2.39 -0.02 -0.47 16 34 H 0.42 -5.77 8.70 -92.71 -0.81 -6.57 16 35 H 0.13 -1.56 7.66 -2.39 -0.02 -1.58 16 36 H 0.13 -1.65 7.66 -2.39 -0.02 -1.67 16 37 H 0.15 -0.29 4.90 -2.91 -0.01 -0.31 16 38 H 0.12 -0.38 7.96 -2.38 -0.02 -0.40 16 39 H 0.40 -4.07 8.70 -74.06 -0.64 -4.72 16 40 H -0.29 -1.18 7.11 99.48 0.71 -0.47 16 41 H -0.29 -1.52 7.11 99.48 0.71 -0.82 16 42 H 0.16 -1.26 8.06 -2.91 -0.02 -1.29 16 43 H 0.17 -2.18 6.30 -2.91 -0.02 -2.20 16 44 H 0.09 -0.14 6.31 -2.39 -0.02 -0.16 16 45 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 46 H 0.13 -0.22 6.66 -2.91 -0.02 -0.23 16 47 H 0.13 -0.16 8.06 -2.91 -0.02 -0.18 16 48 H 0.13 -0.18 8.06 -2.91 -0.02 -0.21 16 49 H 0.13 -0.25 8.06 -2.91 -0.02 -0.28 16 Total: 0.00 -26.50 420.08 0.30 -26.20 By element: Atomic # 1 Polarization: -24.60 SS G_CDS: -0.40 Total: -25.00 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: 3.96 Total: 6.87 kcal Atomic # 7 Polarization: 4.02 SS G_CDS: -2.32 Total: 1.70 kcal Atomic # 8 Polarization: -7.09 SS G_CDS: -2.32 Total: -9.41 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: 2.04 Total: 0.69 kcal Atomic # 35 Polarization: -0.38 SS G_CDS: -0.68 Total: -1.06 kcal Total: -26.50 0.30 -26.20 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.720 kcal (2) G-P(sol) polarization free energy of solvation -26.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.780 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.300 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.201 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 5.40 seconds