Wall clock time and date at job start Tue Mar 9 2021 13:18:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35958 * 117.00041 * 2 1 4 4 C 1.39452 * 120.12444 * 180.02562 * 3 2 1 5 5 O 1.34770 * 133.23922 * 0.38571 * 4 3 2 6 6 C 1.34928 * 110.84460 * 180.10338 * 5 4 3 7 7 C 1.46989 * 125.14446 * 179.81362 * 6 5 4 8 8 O 1.21652 * 120.00006 * 179.69904 * 7 6 5 9 9 N 1.34776 * 119.99647 * 359.69643 * 7 6 5 10 10 C 1.46505 * 119.99597 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.85296 * 23.80222 * 10 9 7 12 12 C 1.53781 * 113.61334 * 154.99978 * 10 9 7 13 13 C 1.53786 * 87.17350 * 89.07333 * 12 10 9 14 14 H 1.09000 * 113.60973 * 270.92699 * 13 12 10 15 15 C 1.50690 * 113.61518 * 140.02616 * 13 12 10 16 16 C 1.38216 * 120.00286 * 119.72655 * 15 13 12 17 17 C 1.50703 * 119.99729 * 359.97438 * 16 15 13 18 18 C 1.38257 * 119.99735 * 179.81058 * 16 15 13 19 19 C 1.38209 * 120.00482 * 0.38938 * 18 16 15 20 20 C 1.38257 * 119.99591 * 359.86372 * 19 18 16 21 21 C 1.38213 * 120.00286 * 359.95192 * 20 19 18 22 22 C 1.53781 * 113.61146 * 252.49455 * 10 9 7 23 23 C 1.35816 * 109.71540 * 359.55049 * 6 5 4 24 24 C 1.40606 * 119.13754 * 180.02562 * 4 3 2 25 25 C 1.39774 * 120.12218 * 359.97438 * 24 4 3 26 26 C 1.50702 * 120.09672 * 179.97438 * 25 24 4 27 27 O 1.42905 * 109.47164 * 74.99656 * 26 25 24 28 28 Si 1.86300 * 109.47173 * 195.00088 * 26 25 24 29 29 C 1.36631 * 119.81436 * 0.02562 * 25 24 4 30 30 C 1.38266 * 120.12151 * 0.02562 * 3 2 1 31 31 H 1.09004 * 109.47060 * 180.02562 * 1 2 3 32 32 H 1.09004 * 109.46641 * 299.99925 * 1 2 3 33 33 H 1.08994 * 109.47287 * 60.00031 * 1 2 3 34 34 H 0.96995 * 120.00232 * 359.97438 * 9 7 6 35 35 H 1.09002 * 113.61445 * 203.66333 * 12 10 9 36 36 H 1.09002 * 113.61408 * 334.48063 * 12 10 9 37 37 H 1.09000 * 109.47004 * 90.00411 * 17 16 15 38 38 H 1.09002 * 109.46753 * 210.00095 * 17 16 15 39 39 H 1.08996 * 109.47036 * 330.00487 * 17 16 15 40 40 H 1.08005 * 119.99825 * 180.23376 * 18 16 15 41 41 H 1.08004 * 120.00259 * 179.83704 * 19 18 16 42 42 H 1.08000 * 119.99695 * 179.97438 * 20 19 18 43 43 H 1.08003 * 119.99797 * 179.97438 * 21 20 19 44 44 H 1.09005 * 113.61471 * 25.43638 * 22 10 9 45 45 H 1.08996 * 113.61178 * 156.24980 * 22 10 9 46 46 H 1.07996 * 126.95384 * 180.24571 * 23 6 5 47 47 H 1.09006 * 109.47003 * 315.00279 * 26 25 24 48 48 H 0.96701 * 113.99913 * 180.02562 * 27 26 25 49 49 H 1.48503 * 109.99645 * 178.67792 * 28 26 25 50 50 H 1.48493 * 109.99924 * 299.99465 * 28 26 25 51 51 H 1.08001 * 119.75414 * 180.02562 * 29 25 24 52 52 H 1.08002 * 119.65963 * 0.02562 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4141 0.3574 -0.0077 6 6 5.6317 0.9386 -0.0024 7 6 6.9131 0.2185 -0.0038 8 8 7.9595 0.8389 -0.0040 9 7 6.9286 -1.1292 -0.0047 10 6 8.2058 -1.8470 -0.0055 11 1 9.0252 -1.2535 0.4000 12 6 8.1173 -3.2625 0.5890 13 6 7.7790 -3.7542 -0.8283 14 1 6.7123 -3.7406 -1.0521 15 6 8.4369 -5.0617 -1.1866 16 6 7.6620 -6.1592 -1.5114 17 6 6.1591 -6.0483 -1.5065 18 6 8.2658 -7.3577 -1.8439 19 6 9.6441 -7.4606 -1.8439 20 6 10.4191 -6.3642 -1.5139 21 6 9.8156 -5.1651 -1.1852 22 6 8.5347 -2.5174 -1.3499 23 6 5.4944 2.2898 -0.0013 24 6 4.0554 2.5510 0.0000 25 6 3.2765 3.7116 0.0006 26 6 3.9381 5.0657 0.0017 27 8 4.4610 5.3415 -1.2993 28 14 2.6862 6.3681 0.4569 29 6 1.9136 3.6151 0.0011 30 6 1.2957 2.3726 0.0005 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3633 0.5139 0.8900 33 1 -0.3633 0.5138 -0.8899 34 1 6.0943 -1.6238 -0.0040 35 1 9.0686 -3.6380 0.9661 36 1 7.3011 -3.3868 1.3008 37 1 5.8142 -5.7415 -2.4939 38 1 5.7243 -7.0155 -1.2541 39 1 5.8518 -5.3079 -0.7680 40 1 7.6604 -8.2142 -2.1014 41 1 10.1156 -8.3976 -2.1011 42 1 11.4961 -6.4448 -1.5135 43 1 10.4211 -4.3088 -0.9270 44 1 8.0547 -2.0405 -2.2046 45 1 9.6002 -2.6878 -1.5036 46 1 6.2874 3.0230 -0.0011 47 1 4.7503 5.0726 0.7287 48 1 4.9024 6.1988 -1.3721 49 1 3.3335 7.7042 0.4927 50 1 1.5737 6.3689 -0.5267 51 1 1.3128 4.5126 0.0011 52 1 0.2174 2.3120 0.0014 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_6672420.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:35 Heat of formation + Delta-G solvation = -6.953044 kcal Electronic energy + Delta-G solvation = -35887.483290 eV Core-core repulsion = 31172.730507 eV Total energy + Delta-G solvation = -4714.752783 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.166 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -43.78579 -41.71768 -40.78112 -40.31117 -39.01772 -38.83634 -37.22145 -34.84851 -33.73687 -33.69151 -32.08675 -31.72189 -30.92319 -28.60392 -27.87913 -26.75196 -26.58269 -26.14535 -24.95996 -24.03608 -23.03761 -22.06745 -21.87825 -21.71995 -20.17352 -19.85651 -18.94260 -18.59669 -18.43617 -17.81081 -17.68704 -17.14235 -17.02184 -16.62287 -16.59467 -16.33039 -16.03429 -15.85697 -15.69909 -15.61166 -15.04114 -14.89032 -14.79229 -14.59844 -14.45666 -14.22925 -14.01424 -13.97842 -13.94041 -13.66082 -13.45382 -13.39146 -13.23695 -13.17200 -12.85735 -12.76760 -12.54252 -12.38259 -12.08746 -12.07327 -11.80007 -11.74358 -11.72501 -11.48720 -11.21552 -11.04498 -10.49407 -10.35465 -9.85905 -9.68016 -9.43032 -9.02768 -4.90818 -0.70539 0.07048 0.42238 0.47963 0.58075 1.13484 1.28548 1.61420 1.82281 1.84207 1.93491 2.11579 2.34069 2.79057 3.11832 3.35429 3.39958 3.53146 3.62568 3.68471 3.70053 3.79260 3.88708 3.92446 3.96574 4.00198 4.05553 4.12135 4.17911 4.23561 4.31853 4.35420 4.41827 4.42077 4.42954 4.55406 4.57315 4.72551 4.74634 4.76353 4.78525 4.80640 4.81019 4.83955 4.90503 4.95828 4.97921 5.01586 5.05129 5.18786 5.20993 5.29353 5.30490 5.40745 5.55808 5.62079 5.63704 5.76790 6.13704 6.15271 6.26219 6.57555 6.77056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.331 6.331 3 C 0.138 3.862 4 C 0.023 3.977 5 O -0.179 6.179 6 C -0.034 4.034 7 C 0.607 3.393 8 O -0.542 6.542 9 N -0.686 5.686 10 C 0.114 3.886 11 H 0.100 0.900 12 C -0.122 4.122 13 C -0.072 4.072 14 H 0.107 0.893 15 C -0.080 4.080 16 C -0.096 4.096 17 C -0.118 4.118 18 C -0.134 4.134 19 C -0.132 4.132 20 C -0.136 4.136 21 C -0.122 4.122 22 C -0.141 4.141 23 C -0.110 4.110 24 C -0.098 4.098 25 C -0.065 4.065 26 C -0.093 4.093 27 O -0.557 6.557 28 Si 0.778 3.222 29 C -0.090 4.090 30 C -0.166 4.166 31 H 0.117 0.883 32 H 0.078 0.922 33 H 0.071 0.929 34 H 0.417 0.583 35 H 0.107 0.893 36 H 0.086 0.914 37 H 0.072 0.928 38 H 0.072 0.928 39 H 0.076 0.924 40 H 0.130 0.870 41 H 0.132 0.868 42 H 0.134 0.866 43 H 0.135 0.865 44 H 0.065 0.935 45 H 0.103 0.897 46 H 0.175 0.825 47 H 0.086 0.914 48 H 0.394 0.606 49 H -0.287 1.287 50 H -0.281 1.281 51 H 0.161 0.839 52 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.052 -0.624 3.307 6.924 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.245 6.245 3 C 0.092 3.908 4 C -0.026 4.026 5 O -0.081 6.081 6 C -0.084 4.084 7 C 0.393 3.607 8 O -0.421 6.421 9 N -0.336 5.336 10 C 0.009 3.991 11 H 0.118 0.882 12 C -0.160 4.160 13 C -0.090 4.090 14 H 0.125 0.875 15 C -0.080 4.080 16 C -0.096 4.096 17 C -0.175 4.175 18 C -0.152 4.152 19 C -0.150 4.150 20 C -0.154 4.154 21 C -0.140 4.140 22 C -0.179 4.179 23 C -0.130 4.130 24 C -0.099 4.099 25 C -0.065 4.065 26 C -0.200 4.200 27 O -0.368 6.368 28 Si 0.681 3.319 29 C -0.107 4.107 30 C -0.184 4.184 31 H 0.135 0.865 32 H 0.096 0.904 33 H 0.090 0.910 34 H 0.254 0.746 35 H 0.125 0.875 36 H 0.104 0.896 37 H 0.091 0.909 38 H 0.091 0.909 39 H 0.095 0.905 40 H 0.148 0.852 41 H 0.150 0.850 42 H 0.152 0.848 43 H 0.152 0.848 44 H 0.084 0.916 45 H 0.122 0.878 46 H 0.193 0.807 47 H 0.104 0.896 48 H 0.245 0.755 49 H -0.214 1.214 50 H -0.208 1.208 51 H 0.178 0.822 52 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -5.921 -0.588 2.949 6.641 hybrid contribution 0.722 0.135 -1.120 1.339 sum -5.199 -0.453 1.829 5.530 Atomic orbital electron populations 1.23495 0.75322 1.06074 1.03138 1.86141 1.24299 1.25624 1.88423 1.17940 0.86107 0.86813 0.99922 1.19161 0.88235 0.87040 1.08121 1.84005 1.12665 1.34956 1.76518 1.21911 0.83987 0.92715 1.09759 1.16617 0.84987 0.82653 0.76485 1.90888 1.31316 1.68176 1.51739 1.45521 1.10608 1.04810 1.72693 1.22009 0.85745 0.93176 0.98142 0.88183 1.23371 1.04270 0.92350 0.96029 1.21686 1.00121 0.90436 0.96741 0.87522 1.19670 0.93521 0.94743 1.00089 1.20075 0.96938 0.93395 0.99185 1.20887 0.90355 1.03412 1.02827 1.21294 0.95253 0.97831 1.00789 1.21410 0.94126 0.99443 1.00021 1.21398 1.00755 0.93241 0.99983 1.21218 0.94347 0.98269 1.00126 1.23606 1.02041 0.95365 0.96891 1.22850 0.95191 0.94476 1.00513 1.19589 0.92572 0.92773 1.05013 1.18657 0.93097 0.92264 1.02507 1.25155 1.06172 1.00733 0.87938 1.86572 1.77272 1.42561 1.30347 0.93962 0.76605 0.73777 0.87518 1.20835 0.92996 0.98828 0.98084 1.21352 1.01852 0.89487 1.05728 0.86481 0.90383 0.91014 0.74607 0.87499 0.89578 0.90938 0.90946 0.90509 0.85165 0.84964 0.84848 0.84766 0.91619 0.87844 0.80737 0.89577 0.75510 1.21373 1.20796 0.82221 0.80201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.03 16 2 O -0.33 -1.02 10.50 -93.07 -0.98 -1.99 16 3 C 0.14 0.60 6.70 22.57 0.15 0.75 16 4 C 0.02 0.19 7.35 23.14 0.17 0.36 16 5 O -0.18 -1.57 10.28 -13.35 -0.14 -1.71 16 6 C -0.03 -0.29 7.07 24.00 0.17 -0.12 16 7 C 0.61 5.08 7.80 86.54 0.67 5.75 16 8 O -0.54 -7.65 16.42 -4.19 -0.07 -7.72 16 9 N -0.69 -1.62 5.26 -443.70 -2.33 -3.95 16 10 C 0.11 0.07 4.32 45.52 0.20 0.27 16 11 H 0.10 0.31 7.46 -2.39 -0.02 0.29 16 12 C -0.12 0.33 7.28 31.12 0.23 0.56 16 13 C -0.07 0.10 3.41 -10.92 -0.04 0.06 16 14 H 0.11 -0.26 6.09 -2.39 -0.01 -0.28 16 15 C -0.08 -0.14 5.29 -19.87 -0.11 -0.25 16 16 C -0.10 -0.24 5.88 -19.86 -0.12 -0.35 16 17 C -0.12 0.16 9.32 71.24 0.66 0.82 16 18 C -0.13 -0.37 9.70 22.27 0.22 -0.15 16 19 C -0.13 -0.33 10.05 22.27 0.22 -0.10 16 20 C -0.14 -0.29 10.05 22.27 0.22 -0.06 16 21 C -0.12 -0.20 8.62 22.27 0.19 -0.01 16 22 C -0.14 -0.01 7.26 31.21 0.23 0.22 16 23 C -0.11 -0.93 10.68 23.79 0.25 -0.67 16 24 C -0.10 -0.77 6.16 -20.25 -0.12 -0.89 16 25 C -0.06 -0.25 5.30 -19.87 -0.11 -0.36 16 26 C -0.09 -0.06 2.70 71.24 0.19 0.13 16 27 O -0.56 -2.05 12.86 -148.98 -1.92 -3.96 16 28 Si 0.78 -2.64 30.20 68.60 2.07 -0.57 16 29 C -0.09 0.01 8.62 22.02 0.19 0.20 16 30 C -0.17 0.18 9.03 22.40 0.20 0.38 16 31 H 0.12 -1.05 8.14 -2.39 -0.02 -1.07 16 32 H 0.08 -0.75 7.66 -2.38 -0.02 -0.77 16 33 H 0.07 -0.62 7.66 -2.39 -0.02 -0.64 16 34 H 0.42 -0.39 8.42 -92.71 -0.78 -1.17 16 35 H 0.11 -0.37 7.72 -2.39 -0.02 -0.39 16 36 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 37 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 38 H 0.07 -0.17 8.09 -2.39 -0.02 -0.19 16 39 H 0.08 -0.23 6.34 -2.39 -0.02 -0.25 16 40 H 0.13 -0.03 8.06 -2.91 -0.02 -0.05 16 41 H 0.13 -0.11 8.06 -2.91 -0.02 -0.13 16 42 H 0.13 -0.17 8.06 -2.91 -0.02 -0.19 16 43 H 0.13 -0.21 6.66 -2.91 -0.02 -0.23 16 44 H 0.07 0.16 8.14 -2.38 -0.02 0.14 16 45 H 0.10 -0.11 6.33 -2.39 -0.02 -0.12 16 46 H 0.18 1.17 8.06 -2.91 -0.02 1.14 16 47 H 0.09 -0.16 7.96 -2.38 -0.02 -0.18 16 48 H 0.39 -1.76 8.74 -74.06 -0.65 -2.41 16 49 H -0.29 -0.33 7.11 99.48 0.71 0.38 16 50 H -0.28 -0.36 6.75 99.48 0.67 0.32 16 51 H 0.16 -0.74 4.85 -2.91 -0.01 -0.76 16 52 H 0.18 -1.50 6.26 -2.91 -0.02 -1.52 16 Total: 0.00 -21.96 426.83 1.01 -20.95 By element: Atomic # 1 Polarization: -8.16 SS G_CDS: -0.43 Total: -8.59 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: 4.80 Total: 7.55 kcal Atomic # 7 Polarization: -1.62 SS G_CDS: -2.33 Total: -3.95 kcal Atomic # 8 Polarization: -12.29 SS G_CDS: -3.10 Total: -15.39 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.07 Total: -0.57 kcal Total: -21.96 1.01 -20.95 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_6672420.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.999 kcal (2) G-P(sol) polarization free energy of solvation -21.959 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.952 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds