Wall clock time and date at job start Tue Mar 9 2021 13:18:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38333 * 119.85667 * 2 1 4 4 C 1.37982 * 120.14984 * 179.97438 * 3 2 1 5 5 C 1.50697 * 120.07373 * 179.97438 * 4 3 2 6 6 C 1.39556 * 119.84983 * 0.04159 * 4 3 2 7 7 C 1.47840 * 120.14490 * 180.02562 * 6 4 3 8 8 O 1.21553 * 119.99776 * 6.20652 * 7 6 4 9 9 N 1.34775 * 120.00341 * 186.20975 * 7 6 4 10 10 C 1.46496 * 120.00116 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.84914 * 334.66700 * 10 9 7 12 12 C 1.53778 * 113.61386 * 105.86441 * 10 9 7 13 13 C 1.54055 * 86.98602 * 89.16385 * 12 10 9 14 14 H 1.09007 * 113.60714 * 270.88398 * 13 12 10 15 15 C 1.50701 * 113.69686 * 139.99338 * 13 12 10 16 16 C 1.38215 * 119.99693 * 142.46784 * 15 13 12 17 17 C 1.50694 * 120.00317 * 359.97438 * 16 15 13 18 18 C 1.38256 * 119.99341 * 179.97438 * 16 15 13 19 19 C 1.38212 * 120.00387 * 359.95737 * 18 16 15 20 20 C 1.38254 * 120.00097 * 359.97438 * 19 18 16 21 21 C 1.38216 * 119.99688 * 359.81827 * 20 19 18 22 22 C 1.53780 * 87.07801 * 25.43096 * 13 12 10 23 23 C 1.39600 * 119.71047 * 359.95950 * 6 4 3 24 24 C 1.37929 * 119.85528 * 0.02562 * 23 6 4 25 25 C 1.50701 * 119.93016 * 179.97438 * 24 23 6 26 26 O 1.42896 * 109.47388 * 104.99603 * 25 24 23 27 27 Si 1.86303 * 109.46645 * 344.99471 * 25 24 23 28 28 H 1.09003 * 109.46425 * 270.02118 * 1 2 3 29 29 H 1.08995 * 109.47114 * 30.01800 * 1 2 3 30 30 H 1.09005 * 109.47166 * 150.02267 * 1 2 3 31 31 H 1.08005 * 119.92382 * 359.97438 * 3 2 1 32 32 H 1.09007 * 109.47021 * 96.59419 * 5 4 3 33 33 H 1.08995 * 109.46950 * 216.58733 * 5 4 3 34 34 H 1.08999 * 109.47315 * 336.59279 * 5 4 3 35 35 H 0.96998 * 119.99832 * 0.02562 * 9 7 6 36 36 H 1.08998 * 113.61817 * 203.66124 * 12 10 9 37 37 H 1.09003 * 113.61711 * 334.57145 * 12 10 9 38 38 H 1.09001 * 109.47300 * 90.00453 * 17 16 15 39 39 H 1.09000 * 109.47169 * 210.00345 * 17 16 15 40 40 H 1.08999 * 109.47550 * 330.00126 * 17 16 15 41 41 H 1.07999 * 119.99634 * 179.97438 * 18 16 15 42 42 H 1.08000 * 120.00396 * 180.02562 * 19 18 16 43 43 H 1.07997 * 120.00405 * 180.02562 * 20 19 18 44 44 H 1.07997 * 120.00081 * 180.23421 * 21 20 19 45 45 H 1.08991 * 113.61576 * 220.02522 * 22 13 12 46 46 H 1.08999 * 113.61481 * 89.11819 * 22 13 12 47 47 H 1.08003 * 120.06843 * 180.29534 * 23 6 4 48 48 H 1.08999 * 109.47112 * 224.99904 * 25 24 23 49 49 H 0.96701 * 114.00332 * 300.00185 * 26 25 24 50 50 H 1.48504 * 109.99884 * 180.02562 * 27 25 24 51 51 H 1.48495 * 110.00305 * 301.31958 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1957 1.1997 0.0000 4 6 3.5755 1.2068 0.0005 5 6 4.3240 2.5147 -0.0001 6 6 4.2763 -0.0001 0.0002 7 6 5.7547 -0.0001 0.0013 8 8 6.3624 1.0463 0.1164 9 7 6.4287 -1.1603 -0.1252 10 6 7.8936 -1.1603 -0.1247 11 1 8.3170 -0.2110 -0.4531 12 6 8.5092 -1.6904 1.1810 13 6 8.4565 -3.0911 0.5418 14 1 7.5202 -3.6190 0.7236 15 6 9.6704 -3.9355 0.8323 16 6 9.5312 -5.2927 1.0536 17 6 8.1655 -5.9280 1.0048 18 6 10.6450 -6.0674 1.3196 19 6 11.8976 -5.4850 1.3634 20 6 12.0369 -4.1276 1.1407 21 6 10.9240 -3.3538 0.8705 22 6 8.5100 -2.3841 -0.8228 23 6 3.5752 -1.2072 0.0002 24 6 2.1959 -1.2002 0.0000 25 6 1.4374 -2.5024 -0.0007 26 8 0.8962 -2.7391 1.3005 27 14 2.5910 -3.8927 -0.4558 28 1 -0.3632 0.0004 1.0277 29 1 -0.3633 0.8898 -0.5141 30 1 -0.3634 -0.8902 -0.5135 31 1 1.6521 2.1330 -0.0004 32 1 4.6065 2.7722 1.0208 33 1 5.2208 2.4198 -0.6121 34 1 3.6861 3.2982 -0.4091 35 1 5.9438 -1.9953 -0.2175 36 1 9.5221 -1.3317 1.3635 37 1 7.8573 -1.5796 2.0476 38 1 7.9540 -6.2572 -0.0125 39 1 8.1396 -6.7856 1.6771 40 1 7.4151 -5.2007 1.3147 41 1 10.5362 -7.1279 1.4929 42 1 12.7677 -6.0902 1.5708 43 1 13.0157 -3.6725 1.1745 44 1 11.0332 -2.2942 0.6928 45 1 7.8589 -2.8328 -1.5729 46 1 9.5232 -2.2145 -1.1872 47 1 4.1117 -2.1446 0.0047 48 1 0.6267 -2.4503 -0.7274 49 1 1.5624 -2.7973 1.9990 50 1 1.8549 -5.1825 -0.4605 51 1 3.1850 -3.6426 -1.7935 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:59 Heat of formation + Delta-G solvation = 5.170661 kcal Electronic energy + Delta-G solvation = -30981.191018 eV Core-core repulsion = 27005.243005 eV Total energy + Delta-G solvation = -3975.948014 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.183 amu Computer time = 3.27 seconds Orbital eigenvalues (eV) -41.91571 -41.17431 -39.99320 -38.77254 -37.61605 -34.96143 -34.39643 -33.82058 -33.15101 -31.56827 -29.30766 -28.61445 -27.87777 -26.78031 -26.17404 -25.56131 -23.81096 -23.33287 -22.38365 -21.84907 -21.00788 -20.06929 -19.11431 -17.82860 -17.46388 -17.33213 -16.77785 -16.50561 -16.38081 -16.25991 -16.12758 -15.81095 -15.57287 -15.07051 -15.04534 -14.86365 -14.67720 -14.58229 -14.31381 -14.13345 -14.01338 -13.93226 -13.62826 -13.51060 -13.41581 -13.27632 -13.10226 -12.85764 -12.82331 -12.68079 -12.65633 -12.53024 -12.13473 -12.08431 -11.87677 -11.74607 -11.55430 -11.20438 -10.61852 -10.51150 -10.12484 -9.91251 -9.66701 -9.60300 -9.42761 -5.21385 -0.23460 0.15169 0.44149 0.49777 1.15559 1.50166 1.79661 1.86223 2.02018 2.66419 2.80785 3.33829 3.38543 3.44784 3.54616 3.63362 3.64631 3.68919 3.80217 3.88138 3.96483 4.01815 4.09004 4.10916 4.14165 4.20775 4.36006 4.37887 4.49051 4.50661 4.56300 4.59152 4.67153 4.68596 4.69283 4.70136 4.75348 4.78735 4.85436 4.87184 4.93641 4.94527 4.97160 5.03686 5.06371 5.09867 5.16900 5.25266 5.29706 5.45562 5.51367 5.57565 5.63261 5.65323 5.77396 5.79777 6.12855 6.42570 6.47094 7.19094 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.024 4.024 3 C -0.132 4.132 4 C -0.008 4.008 5 C -0.124 4.124 6 C -0.146 4.146 7 C 0.563 3.437 8 O -0.524 6.524 9 N -0.711 5.711 10 C 0.120 3.880 11 H 0.106 0.894 12 C -0.143 4.143 13 C -0.078 4.078 14 H 0.102 0.898 15 C -0.072 4.072 16 C -0.083 4.083 17 C -0.120 4.120 18 C -0.119 4.119 19 C -0.120 4.120 20 C -0.123 4.123 21 C -0.113 4.113 22 C -0.135 4.135 23 C -0.071 4.071 24 C -0.138 4.138 25 C -0.064 4.064 26 O -0.536 6.536 27 Si 0.670 3.330 28 H 0.082 0.918 29 H 0.068 0.932 30 H 0.071 0.929 31 H 0.133 0.867 32 H 0.079 0.921 33 H 0.096 0.904 34 H 0.060 0.940 35 H 0.398 0.602 36 H 0.095 0.905 37 H 0.075 0.925 38 H 0.071 0.929 39 H 0.066 0.934 40 H 0.070 0.930 41 H 0.121 0.879 42 H 0.121 0.879 43 H 0.121 0.879 44 H 0.122 0.878 45 H 0.076 0.924 46 H 0.099 0.901 47 H 0.126 0.874 48 H 0.116 0.884 49 H 0.379 0.621 50 H -0.250 1.250 51 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.129 -2.306 0.574 2.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.025 4.025 3 C -0.150 4.150 4 C -0.009 4.009 5 C -0.180 4.180 6 C -0.149 4.149 7 C 0.352 3.648 8 O -0.401 6.401 9 N -0.363 5.363 10 C 0.015 3.985 11 H 0.124 0.876 12 C -0.181 4.181 13 C -0.096 4.096 14 H 0.120 0.880 15 C -0.072 4.072 16 C -0.083 4.083 17 C -0.176 4.176 18 C -0.137 4.137 19 C -0.138 4.138 20 C -0.141 4.141 21 C -0.131 4.131 22 C -0.173 4.173 23 C -0.089 4.089 24 C -0.138 4.138 25 C -0.175 4.175 26 O -0.341 6.341 27 Si 0.571 3.429 28 H 0.100 0.900 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.151 0.849 32 H 0.097 0.903 33 H 0.115 0.885 34 H 0.079 0.921 35 H 0.234 0.766 36 H 0.114 0.886 37 H 0.094 0.906 38 H 0.090 0.910 39 H 0.085 0.915 40 H 0.089 0.911 41 H 0.139 0.861 42 H 0.139 0.861 43 H 0.139 0.861 44 H 0.140 0.860 45 H 0.095 0.905 46 H 0.117 0.883 47 H 0.143 0.857 48 H 0.133 0.867 49 H 0.226 0.774 50 H -0.174 1.174 51 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 0.192 -2.193 -0.263 2.217 hybrid contribution -0.526 -0.149 -0.181 0.576 sum -0.334 -2.341 -0.444 2.406 Atomic orbital electron populations 1.20927 0.90406 1.03008 1.03374 1.20003 0.96599 0.92018 0.93863 1.21044 0.93187 0.98073 1.02696 1.20103 0.93364 0.94922 0.92480 1.21130 1.00898 0.92060 1.03933 1.19602 0.92534 0.93659 1.09071 1.18211 0.86971 0.83574 0.76042 1.90755 1.69861 1.30682 1.48812 1.45605 1.06495 1.09289 1.74896 1.21862 0.79555 1.00072 0.97010 0.87574 1.23609 1.02191 0.94637 0.97706 1.21748 0.96771 0.94360 0.96756 0.87972 1.19499 0.94322 0.93143 1.00277 1.19785 0.95756 0.93221 0.99509 1.20884 0.93478 1.00749 1.02513 1.21057 0.92312 0.99708 1.00657 1.21167 0.97408 0.95189 1.00040 1.21148 0.98694 0.94142 1.00159 1.20995 0.92017 0.99886 1.00200 1.23418 1.02342 0.95292 0.96286 1.20973 0.93470 0.96439 0.98043 1.20048 0.93201 0.95781 1.04807 1.24999 1.03576 0.99555 0.89348 1.86519 1.37109 1.94463 1.16051 0.95254 0.84166 0.78012 0.85471 0.89956 0.91261 0.91018 0.84914 0.90288 0.88524 0.92136 0.76622 0.88641 0.90592 0.91049 0.91458 0.91109 0.86116 0.86124 0.86093 0.85966 0.90529 0.88283 0.85659 0.86668 0.77406 1.17419 1.17657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.10 9.53 36.01 0.34 0.44 16 2 C -0.02 -0.01 5.89 -104.53 -0.62 -0.62 16 3 C -0.13 -0.07 9.31 -39.64 -0.37 -0.44 16 4 C -0.01 -0.01 5.91 -104.23 -0.62 -0.63 16 5 C -0.12 -0.19 8.73 36.00 0.31 0.13 16 6 C -0.15 -0.14 5.87 -104.97 -0.62 -0.76 16 7 C 0.56 0.96 7.70 -12.33 -0.09 0.87 16 8 O -0.52 -2.43 12.97 5.32 0.07 -2.36 16 9 N -0.71 0.73 5.21 -53.96 -0.28 0.45 16 10 C 0.12 -0.12 4.29 -67.12 -0.29 -0.41 16 11 H 0.11 0.06 7.50 -51.93 -0.39 -0.33 16 12 C -0.14 0.19 7.27 -25.78 -0.19 0.00 16 13 C -0.08 0.15 3.58 -90.81 -0.33 -0.17 16 14 H 0.10 -0.33 5.76 -51.93 -0.30 -0.63 16 15 C -0.07 0.01 5.29 -104.62 -0.55 -0.54 16 16 C -0.08 -0.01 5.88 -104.63 -0.62 -0.63 16 17 C -0.12 0.24 9.53 36.00 0.34 0.59 16 18 C -0.12 -0.06 9.70 -39.58 -0.38 -0.44 16 19 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 20 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 21 C -0.11 -0.01 8.60 -39.58 -0.34 -0.35 16 22 C -0.14 0.29 7.29 -25.92 -0.19 0.10 16 23 C -0.07 0.07 8.13 -39.19 -0.32 -0.25 16 24 C -0.14 0.06 5.26 -104.68 -0.55 -0.49 16 25 C -0.06 0.07 2.04 36.01 0.07 0.15 16 26 O -0.54 0.46 12.80 -35.23 -0.45 0.00 16 27 Si 0.67 -1.40 29.91 -169.99 -5.08 -6.49 16 28 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 -0.11 8.08 -51.93 -0.42 -0.53 16 30 H 0.07 -0.06 6.22 -51.93 -0.32 -0.38 16 31 H 0.13 -0.13 8.06 -52.48 -0.42 -0.55 16 32 H 0.08 0.14 8.14 -51.92 -0.42 -0.28 16 33 H 0.10 0.30 5.86 -51.93 -0.30 0.00 16 34 H 0.06 0.00 8.04 -51.93 -0.42 -0.41 16 35 H 0.40 -1.37 6.78 -40.82 -0.28 -1.64 16 36 H 0.10 -0.13 6.34 -51.93 -0.33 -0.46 16 37 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 39 H 0.07 -0.16 8.09 -51.93 -0.42 -0.58 16 40 H 0.07 -0.23 5.99 -51.93 -0.31 -0.54 16 41 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 42 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 43 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 44 H 0.12 -0.15 6.69 -52.49 -0.35 -0.51 16 45 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 46 H 0.10 -0.20 7.71 -51.93 -0.40 -0.60 16 47 H 0.13 -0.48 3.53 -52.48 -0.19 -0.67 16 48 H 0.12 -0.09 6.48 -51.93 -0.34 -0.42 16 49 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 50 H -0.25 -0.31 7.11 56.52 0.40 0.10 16 51 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 LS Contribution 399.70 15.07 6.02 6.02 Total: 0.00 -7.04 399.70 -12.88 -19.92 By element: Atomic # 1 Polarization: -5.80 SS G_CDS: -7.37 Total: -13.17 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -5.79 Total: -4.37 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.28 Total: 0.45 kcal Atomic # 8 Polarization: -1.98 SS G_CDS: -0.38 Total: -2.36 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.08 Total: -6.49 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -7.04 -12.88 -19.92 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.087 kcal (2) G-P(sol) polarization free energy of solvation -7.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.879 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.917 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.171 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.27 seconds