Wall clock time and date at job start Tue Mar 9 2021 13:19:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36777 * 125.80250 * 2 1 4 4 C 1.47263 * 126.93750 * 359.97438 * 3 2 1 5 5 O 1.21626 * 120.00314 * 359.70288 * 4 3 2 6 6 N 1.34783 * 119.99535 * 179.70613 * 4 3 2 7 7 C 1.46497 * 119.99775 * 180.02562 * 6 4 3 8 8 H 1.08998 * 112.85143 * 336.18989 * 7 6 4 9 9 C 1.53776 * 113.69545 * 107.46323 * 7 6 4 10 10 C 1.53780 * 87.08139 * 89.12187 * 9 7 6 11 11 H 1.08994 * 113.69485 * 270.87441 * 10 9 7 12 12 C 1.50706 * 113.61241 * 139.98036 * 10 9 7 13 13 C 1.38216 * 119.99819 * 142.50500 * 12 10 9 14 14 C 1.50700 * 120.00003 * 359.97438 * 13 12 10 15 15 C 1.38254 * 119.99725 * 179.97438 * 13 12 10 16 16 C 1.38212 * 120.00319 * 0.02562 * 15 13 12 17 17 C 1.38260 * 119.99650 * 0.26336 * 16 15 13 18 18 C 1.38209 * 120.00092 * 359.45889 * 17 16 15 19 19 C 1.53781 * 87.08203 * 25.43625 * 10 9 7 20 20 C 1.46678 * 106.11426 * 179.72443 * 3 2 1 21 21 C 1.34485 * 106.33738 * 0.24532 * 20 3 2 22 22 C 1.50701 * 125.57733 * 179.97438 * 21 20 3 23 23 O 1.42908 * 109.46791 * 300.00141 * 22 21 20 24 24 Si 1.86292 * 109.47347 * 179.97438 * 22 21 20 25 25 N 1.34652 * 125.80348 * 180.14261 * 2 1 3 26 26 H 1.09006 * 109.47336 * 89.99421 * 1 2 3 27 27 H 1.08997 * 109.47289 * 209.99518 * 1 2 3 28 28 H 1.09008 * 109.47014 * 329.99923 * 1 2 3 29 29 H 0.96998 * 119.99909 * 359.97438 * 6 4 3 30 30 H 1.09000 * 113.61017 * 334.57605 * 9 7 6 31 31 H 1.08997 * 113.61976 * 203.67535 * 9 7 6 32 32 H 1.09000 * 109.46827 * 269.97514 * 14 13 12 33 33 H 1.08999 * 109.47240 * 29.97943 * 14 13 12 34 34 H 1.08999 * 109.46861 * 149.97563 * 14 13 12 35 35 H 1.07999 * 119.99740 * 180.02562 * 15 13 12 36 36 H 1.08002 * 119.99812 * 179.97438 * 16 15 13 37 37 H 1.08004 * 119.99616 * 179.72197 * 17 16 15 38 38 H 1.08000 * 119.99979 * 180.30237 * 18 17 16 39 39 H 1.09002 * 113.61545 * 89.10601 * 19 10 9 40 40 H 1.08996 * 113.61552 * 220.01959 * 19 10 9 41 41 H 1.08004 * 126.83197 * 180.26261 * 20 3 2 42 42 H 1.08998 * 109.47275 * 59.99345 * 22 21 20 43 43 H 0.96697 * 113.99692 * 180.02562 * 23 22 21 44 44 H 1.48506 * 109.99835 * 59.99903 * 24 22 21 45 45 H 1.48501 * 110.00038 * 181.31659 * 24 22 21 46 46 H 0.97002 * 124.84934 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0065 6 7 2.7850 3.5055 0.0055 7 6 2.3504 4.9045 0.0056 8 1 1.3492 5.0367 -0.4047 9 6 2.5640 5.6179 1.3510 10 6 3.9633 5.9971 0.8383 11 1 4.7292 5.2561 1.0668 12 6 4.3794 7.3996 1.2006 13 6 5.6926 7.6647 1.5405 14 6 6.7081 6.5514 1.5495 15 6 6.0743 8.9514 1.8724 16 6 5.1428 9.9724 1.8647 17 6 3.8280 9.7060 1.5304 18 6 3.4475 8.4208 1.1931 19 6 3.3902 5.8725 -0.5833 20 6 3.6882 0.6152 0.0068 21 6 3.6096 -0.7274 0.0047 22 6 4.7819 -1.6743 0.0093 23 8 5.5815 -1.4480 -1.1534 24 14 4.1615 -3.4309 0.0048 25 7 2.2947 -1.0921 -0.0027 26 1 -0.3634 0.0001 -1.0277 27 1 -0.3634 -0.8900 0.5137 28 1 -0.3633 0.8900 0.5139 29 1 3.7311 3.2915 0.0106 30 1 2.5806 4.9418 2.2058 31 1 1.9067 6.4745 1.5003 32 1 6.7363 6.0933 2.5381 33 1 6.4312 5.8010 0.8090 34 1 7.6915 6.9547 1.3078 35 1 7.1005 9.1587 2.1376 36 1 5.4411 10.9775 2.1243 37 1 3.0991 10.5030 1.5287 38 1 2.4214 8.2137 0.9272 39 1 2.9586 6.7987 -0.9628 40 1 4.0737 5.4020 -1.2900 41 1 4.5890 1.2110 0.0126 42 1 5.3831 -1.5039 0.9024 43 1 6.3555 -2.0242 -1.2166 44 1 3.3400 -3.6763 -1.2077 45 1 5.3076 -4.3744 0.0414 46 1 1.9734 -2.0073 -0.0054 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:11 Heat of formation + Delta-G solvation = 24.981613 kcal Electronic energy + Delta-G solvation = -27100.252651 eV Core-core repulsion = 23343.501553 eV Total energy + Delta-G solvation = -3756.751098 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 1.96 seconds Orbital eigenvalues (eV) -42.43852 -41.42611 -39.94415 -38.51026 -37.93096 -34.43904 -33.69294 -32.86225 -32.20770 -31.26596 -29.02767 -27.86704 -26.65378 -26.36165 -25.33114 -23.67228 -22.66545 -21.79359 -21.41325 -20.58630 -19.89590 -18.79336 -18.17370 -17.67093 -17.00214 -16.80135 -16.42554 -16.25827 -15.94270 -15.74212 -15.30296 -15.18512 -14.81952 -14.73994 -14.68292 -14.54938 -14.16933 -14.12393 -13.94924 -13.64264 -13.46709 -13.42893 -13.40257 -13.18638 -12.95057 -12.75869 -12.63786 -12.53313 -12.17535 -12.02978 -11.62147 -11.49713 -11.08628 -10.82449 -10.54914 -9.95793 -9.75125 -9.59686 -9.35909 -9.08685 -5.27557 0.50107 0.55557 0.82186 0.96146 1.27250 1.31727 1.67478 1.98425 2.44043 2.69940 2.86914 3.24950 3.53776 3.62501 3.74837 3.80662 3.88408 3.96568 4.05247 4.09026 4.13466 4.20705 4.22016 4.28208 4.28595 4.42986 4.54756 4.63746 4.69568 4.73868 4.75231 4.77828 4.79806 4.82988 4.92144 4.94465 5.03307 5.07985 5.09618 5.21120 5.23383 5.30705 5.33865 5.65638 5.70420 5.73315 5.77999 5.85115 5.91879 6.18678 6.23664 6.38688 6.76245 7.53508 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.126 3.874 3 C -0.241 4.241 4 C 0.597 3.403 5 O -0.547 6.547 6 N -0.710 5.710 7 C 0.123 3.877 8 H 0.105 0.895 9 C -0.143 4.143 10 C -0.077 4.077 11 H 0.100 0.900 12 C -0.071 4.071 13 C -0.083 4.083 14 C -0.118 4.118 15 C -0.120 4.120 16 C -0.121 4.121 17 C -0.123 4.123 18 C -0.113 4.113 19 C -0.136 4.136 20 C -0.126 4.126 21 C 0.017 3.983 22 C -0.042 4.042 23 O -0.531 6.531 24 Si 0.665 3.335 25 N -0.544 5.544 26 H 0.081 0.919 27 H 0.068 0.932 28 H 0.104 0.896 29 H 0.400 0.600 30 H 0.074 0.926 31 H 0.094 0.906 32 H 0.070 0.930 33 H 0.069 0.931 34 H 0.066 0.934 35 H 0.120 0.880 36 H 0.121 0.879 37 H 0.121 0.879 38 H 0.123 0.877 39 H 0.097 0.903 40 H 0.075 0.925 41 H 0.145 0.855 42 H 0.088 0.912 43 H 0.383 0.617 44 H -0.250 1.250 45 H -0.249 1.249 46 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.561 -3.213 2.354 4.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.007 3.993 3 C -0.251 4.251 4 C 0.387 3.613 5 O -0.426 6.426 6 N -0.360 5.360 7 C 0.017 3.983 8 H 0.123 0.877 9 C -0.182 4.182 10 C -0.095 4.095 11 H 0.118 0.882 12 C -0.071 4.071 13 C -0.083 4.083 14 C -0.175 4.175 15 C -0.138 4.138 16 C -0.139 4.139 17 C -0.142 4.142 18 C -0.131 4.131 19 C -0.174 4.174 20 C -0.151 4.151 21 C -0.090 4.090 22 C -0.152 4.152 23 O -0.338 6.338 24 Si 0.564 3.436 25 N -0.143 5.143 26 H 0.099 0.901 27 H 0.087 0.913 28 H 0.123 0.877 29 H 0.235 0.765 30 H 0.093 0.907 31 H 0.112 0.888 32 H 0.089 0.911 33 H 0.088 0.912 34 H 0.085 0.915 35 H 0.138 0.862 36 H 0.139 0.861 37 H 0.139 0.861 38 H 0.141 0.859 39 H 0.115 0.885 40 H 0.094 0.906 41 H 0.163 0.837 42 H 0.106 0.894 43 H 0.232 0.768 44 H -0.174 1.174 45 H -0.173 1.173 46 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 1.254 -3.497 1.803 4.129 hybrid contribution 1.698 -0.282 -0.570 1.814 sum 2.952 -3.779 1.233 4.951 Atomic orbital electron populations 1.20658 0.86446 1.04647 1.03886 1.20383 0.93770 0.85129 0.99977 1.20059 0.92991 0.91973 1.20076 1.17294 0.85210 0.83945 0.74869 1.90749 1.16565 1.84316 1.50921 1.45419 1.09701 1.04904 1.76022 1.21788 0.99503 0.80180 0.96795 0.87714 1.23559 0.95918 1.00710 0.98003 1.21655 0.97327 0.93818 0.96685 0.88176 1.19547 0.92919 0.94874 0.99770 1.19793 0.94246 0.95005 0.99287 1.20855 0.97418 0.96760 1.02453 1.21049 0.99651 0.92482 1.00591 1.21158 0.93504 0.99157 1.00076 1.21145 0.96286 0.96782 0.99939 1.21004 0.99359 0.92589 1.00174 1.23424 0.98107 0.99875 0.96022 1.21736 0.95635 0.92519 1.05186 1.19083 0.83270 0.94333 1.12357 1.23974 0.92631 1.07738 0.90884 1.86610 1.41397 1.62406 1.43394 0.95693 0.85734 0.74351 0.87803 1.41634 1.05368 1.08539 1.58798 0.90076 0.91347 0.87713 0.76538 0.90744 0.88792 0.91112 0.91245 0.91521 0.86159 0.86143 0.86096 0.85924 0.88477 0.90606 0.83688 0.89402 0.76831 1.17420 1.17331 0.74722 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.02 9.88 36.01 0.36 0.33 16 2 C 0.13 0.19 7.17 -81.88 -0.59 -0.39 16 3 C -0.24 -0.64 6.29 -103.35 -0.65 -1.29 16 4 C 0.60 2.21 7.81 -12.59 -0.10 2.11 16 5 O -0.55 -3.55 14.42 5.25 0.08 -3.48 16 6 N -0.71 -0.74 5.26 -54.14 -0.28 -1.03 16 7 C 0.12 0.09 4.32 -67.12 -0.29 -0.20 16 8 H 0.10 0.24 7.46 -51.93 -0.39 -0.15 16 9 C -0.14 -0.03 7.26 -25.92 -0.19 -0.22 16 10 C -0.08 0.03 3.41 -90.96 -0.31 -0.28 16 11 H 0.10 -0.11 6.07 -51.93 -0.32 -0.42 16 12 C -0.07 -0.08 5.29 -104.62 -0.55 -0.63 16 13 C -0.08 -0.11 5.88 -104.62 -0.62 -0.72 16 14 C -0.12 0.08 9.33 36.01 0.34 0.41 16 15 C -0.12 -0.17 9.70 -39.58 -0.38 -0.55 16 16 C -0.12 -0.16 10.05 -39.58 -0.40 -0.56 16 17 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 18 C -0.11 -0.13 8.61 -39.59 -0.34 -0.47 16 19 C -0.14 0.08 7.29 -25.92 -0.19 -0.11 16 20 C -0.13 -0.16 10.43 -37.50 -0.39 -0.56 16 21 C 0.02 0.01 6.14 -81.86 -0.50 -0.49 16 22 C -0.04 0.06 2.97 36.01 0.11 0.17 16 23 O -0.53 0.09 12.84 -35.23 -0.45 -0.36 16 24 Si 0.66 -1.68 30.94 -169.99 -5.26 -6.94 16 25 N -0.54 0.11 5.41 -5.42 -0.03 0.08 16 26 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 27 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.10 0.21 6.47 -51.92 -0.34 -0.12 16 29 H 0.40 -0.36 7.83 -40.82 -0.32 -0.68 16 30 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 31 H 0.09 -0.01 6.31 -51.93 -0.33 -0.33 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 -0.10 6.33 -51.93 -0.33 -0.43 16 34 H 0.07 -0.08 8.09 -51.93 -0.42 -0.50 16 35 H 0.12 -0.01 8.06 -52.49 -0.42 -0.44 16 36 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 37 H 0.12 -0.04 8.06 -52.48 -0.42 -0.47 16 38 H 0.12 -0.03 6.66 -52.49 -0.35 -0.38 16 39 H 0.10 -0.06 7.72 -51.93 -0.40 -0.46 16 40 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 41 H 0.15 -0.06 7.70 -52.48 -0.40 -0.46 16 42 H 0.09 -0.29 7.96 -51.93 -0.41 -0.70 16 43 H 0.38 -1.63 8.74 45.56 0.40 -1.23 16 44 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 45 H -0.25 0.10 7.11 56.52 0.40 0.51 16 46 H 0.41 -1.16 6.70 -40.82 -0.27 -1.43 16 LS Contribution 373.90 15.07 5.63 5.63 Total: 0.00 -8.44 373.90 -11.87 -20.31 By element: Atomic # 1 Polarization: -3.76 SS G_CDS: -6.46 Total: -10.21 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -5.10 Total: -4.00 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -0.31 Total: -0.95 kcal Atomic # 8 Polarization: -3.46 SS G_CDS: -0.38 Total: -3.84 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.26 Total: -6.94 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -8.44 -11.87 -20.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.290 kcal (2) G-P(sol) polarization free energy of solvation -8.437 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.872 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.309 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.982 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.97 seconds