Wall clock time and date at job start Tue Mar 9 2021 13:26:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47052 * 2 1 4 4 C 1.50693 * 109.47517 * 120.00373 * 2 1 3 5 5 C 1.35455 * 125.56526 * 245.02832 * 4 2 1 6 6 C 1.39829 * 107.86642 * 179.72977 * 5 4 2 7 7 C 1.37873 * 107.08553 * 0.02562 * 6 5 4 8 8 C 1.46681 * 126.23371 * 179.97438 * 7 6 5 9 9 O 1.21692 * 119.99858 * 0.02562 * 8 7 6 10 10 N 1.34780 * 120.00103 * 180.02562 * 8 7 6 11 11 C 1.46491 * 119.99979 * 180.02562 * 10 8 7 12 12 H 1.09001 * 112.85126 * 336.19557 * 11 10 8 13 13 C 1.53779 * 113.61595 * 107.50222 * 11 10 8 14 14 C 1.53780 * 87.08349 * 89.11715 * 13 11 10 15 15 H 1.09005 * 113.68810 * 270.87681 * 14 13 11 16 16 C 1.50693 * 113.61961 * 139.98431 * 14 13 11 17 17 C 1.38222 * 119.98428 * 142.49875 * 16 14 13 18 18 C 1.38247 * 120.03758 * 179.97438 * 17 16 14 19 19 C 1.38306 * 120.00454 * 0.02562 * 18 17 16 20 20 Cl 1.73595 * 120.02323 * 179.97438 * 19 18 17 21 21 C 1.38488 * 119.95586 * 0.02562 * 19 18 17 22 22 Cl 1.73602 * 120.01516 * 179.97438 * 21 19 18 23 23 C 1.38251 * 119.98082 * 322.22469 * 16 14 13 24 24 C 1.53781 * 87.08084 * 25.43058 * 14 13 11 25 25 N 1.35538 * 125.56415 * 64.71081 * 4 2 1 26 26 H 0.96697 * 113.99731 * 299.99496 * 1 2 3 27 27 H 1.08999 * 109.46997 * 240.00541 * 2 1 3 28 28 H 1.48505 * 110.00415 * 300.00646 * 3 2 1 29 29 H 1.48508 * 109.99896 * 61.31973 * 3 2 1 30 30 H 1.08001 * 126.06224 * 359.72726 * 5 4 2 31 31 H 1.07997 * 126.45929 * 179.97438 * 6 5 4 32 32 H 0.96999 * 119.99621 * 359.97438 * 10 8 7 33 33 H 1.09004 * 113.61806 * 203.66084 * 13 11 10 34 34 H 1.09003 * 113.61728 * 334.56575 * 13 11 10 35 35 H 1.07997 * 119.98350 * 359.95973 * 17 16 14 36 36 H 1.08001 * 119.99778 * 179.97438 * 18 17 16 37 37 H 1.08002 * 119.99721 * 0.02562 * 23 16 14 38 38 H 1.08995 * 113.61492 * 220.02140 * 24 14 13 39 39 H 1.09002 * 113.60843 * 89.11986 * 24 14 13 40 40 H 0.97000 * 125.67555 * 0.27530 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.6326 -0.1393 2.2387 6 6 2.9022 -1.1296 3.1884 7 6 2.3459 -2.3013 2.7209 8 6 2.3818 -3.6058 3.3907 9 8 2.9425 -3.7232 4.4643 10 7 1.7939 -4.6743 2.8169 11 6 1.8294 -5.9770 3.4861 12 1 2.6621 -6.0724 4.1830 13 6 0.4757 -6.4020 4.0791 14 6 0.1717 -7.0498 2.7179 15 1 -0.3081 -6.3749 2.0091 16 6 -0.5285 -8.3799 2.8252 17 6 -1.5067 -8.7214 1.9103 18 6 -2.1494 -9.9415 2.0074 19 6 -1.8141 -10.8211 3.0207 20 17 -2.6213 -12.3531 3.1434 21 6 -0.8347 -10.4785 3.9379 22 17 -0.4132 -11.5812 5.2108 23 6 -0.1881 -9.2603 3.8353 24 6 1.6925 -7.1681 2.5231 25 7 1.7502 -2.0239 1.5114 26 1 -0.3933 0.4416 0.7651 27 1 1.7923 -0.5137 -0.8900 28 1 1.5614 2.4680 -1.2084 29 1 1.5878 2.4585 1.2243 30 1 2.9306 0.8970 2.2985 31 1 3.4447 -1.0011 4.1133 32 1 1.3467 -4.5805 1.9613 33 1 0.5623 -7.1200 4.8947 34 1 -0.1783 -5.5637 4.3195 35 1 -1.7693 -8.0345 1.1193 36 1 -2.9139 -10.2075 1.2925 37 1 0.5791 -8.9946 4.5475 38 1 2.0210 -6.9483 1.5073 39 1 2.1118 -8.0955 2.9133 40 1 1.2795 -2.6622 0.9529 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:26:57 Heat of formation + Delta-G solvation = 20.389993 kcal Electronic energy + Delta-G solvation = -26769.938309 eV Core-core repulsion = 22604.463757 eV Total energy + Delta-G solvation = -4165.474553 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.053 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.55420 -41.55981 -40.31720 -39.02052 -37.80456 -37.59466 -37.47240 -34.75945 -32.28960 -31.97795 -31.79971 -31.12831 -27.26487 -26.76064 -26.03005 -24.19989 -23.51648 -22.68630 -21.60004 -21.18114 -20.29748 -19.87434 -18.62150 -18.15264 -17.29773 -16.99252 -16.68391 -16.67368 -16.30318 -16.09694 -15.63724 -15.42771 -15.24860 -15.13224 -14.97076 -14.71704 -14.45785 -14.33714 -13.97835 -13.76283 -13.70815 -13.56903 -13.46735 -12.97050 -12.94133 -12.46112 -12.34418 -12.30979 -12.07815 -11.90071 -11.85366 -11.63028 -11.38098 -11.30856 -10.82148 -10.28012 -10.06449 -10.01182 -9.63606 -9.28324 -4.81894 -0.15234 0.02522 0.29467 0.77578 1.17379 1.23757 1.55207 1.70496 1.87966 1.97548 2.22580 2.25771 2.32890 3.35859 3.37440 3.52473 3.58548 3.60827 3.62711 3.79054 3.87310 4.02046 4.07362 4.21058 4.23945 4.26537 4.32622 4.52435 4.56332 4.68093 4.73368 4.78827 4.83061 4.92605 4.97013 4.98066 5.00379 5.09182 5.12543 5.33193 5.50103 5.57478 5.60152 5.79468 6.28290 6.41645 6.46359 7.03423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.060 4.060 3 Si 0.790 3.210 4 C 0.034 3.966 5 C -0.207 4.207 6 C -0.118 4.118 7 C -0.062 4.062 8 C 0.592 3.408 9 O -0.569 6.569 10 N -0.698 5.698 11 C 0.114 3.886 12 H 0.089 0.911 13 C -0.145 4.145 14 C -0.063 4.063 15 H 0.125 0.875 16 C -0.052 4.052 17 C -0.093 4.093 18 C -0.100 4.100 19 C -0.053 4.053 20 Cl -0.063 7.063 21 C -0.044 4.044 22 Cl -0.062 7.062 23 C -0.101 4.101 24 C -0.124 4.124 25 N -0.510 5.510 26 H 0.390 0.610 27 H 0.137 0.863 28 H -0.299 1.299 29 H -0.284 1.284 30 H 0.164 0.836 31 H 0.144 0.856 32 H 0.411 0.589 33 H 0.096 0.904 34 H 0.070 0.930 35 H 0.167 0.833 36 H 0.157 0.843 37 H 0.151 0.849 38 H 0.094 0.906 39 H 0.102 0.898 40 H 0.429 0.571 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.149 3.310 -6.709 7.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.169 4.169 3 Si 0.694 3.306 4 C -0.085 4.085 5 C -0.231 4.231 6 C -0.145 4.145 7 C -0.176 4.176 8 C 0.380 3.620 9 O -0.448 6.448 10 N -0.349 5.349 11 C 0.009 3.991 12 H 0.107 0.893 13 C -0.184 4.184 14 C -0.081 4.081 15 H 0.143 0.857 16 C -0.053 4.053 17 C -0.111 4.111 18 C -0.118 4.118 19 C -0.080 4.080 20 Cl -0.034 7.034 21 C -0.072 4.072 22 Cl -0.033 7.033 23 C -0.120 4.120 24 C -0.162 4.162 25 N -0.108 5.108 26 H 0.239 0.761 27 H 0.154 0.846 28 H -0.227 1.227 29 H -0.210 1.210 30 H 0.182 0.818 31 H 0.162 0.838 32 H 0.247 0.753 33 H 0.115 0.885 34 H 0.089 0.911 35 H 0.185 0.815 36 H 0.175 0.825 37 H 0.168 0.832 38 H 0.112 0.888 39 H 0.120 0.880 40 H 0.269 0.731 Dipole moment (debyes) X Y Z Total from point charges 0.302 3.312 -6.433 7.241 hybrid contribution -1.591 -1.009 0.512 1.952 sum -1.288 2.303 -5.920 6.482 Atomic orbital electron populations 1.86579 1.18058 1.80482 1.50448 1.25007 0.83601 1.11912 0.96397 0.93314 0.90307 0.70458 0.76543 1.21230 1.03701 0.84244 0.99342 1.20940 1.06260 1.00837 0.95020 1.21483 1.01364 0.91089 1.00570 1.20258 1.10840 0.95319 0.91168 1.17219 0.77747 0.82930 0.84066 1.90856 1.46183 1.84948 1.22832 1.45388 1.56856 1.08055 1.24584 1.21883 0.98881 0.82136 0.96197 0.89296 1.23587 0.96707 1.00877 0.97189 1.21671 0.95230 0.92472 0.98754 0.85746 1.19900 0.95884 0.95732 0.93763 1.21483 0.94506 0.95891 0.99245 1.21344 1.00679 0.93186 0.96610 1.21052 0.97807 0.90271 0.98905 1.98403 1.78315 1.28861 1.97784 1.20952 0.99179 0.93987 0.93049 1.98406 1.92486 1.62602 1.49776 1.21067 1.00163 0.90953 0.99795 1.23400 0.94285 0.97662 1.00848 1.41867 1.42544 1.09643 1.16699 0.76066 0.84556 1.22708 1.20993 0.81824 0.83804 0.75257 0.88528 0.91104 0.81550 0.82506 0.83168 0.88766 0.88008 0.73122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.10 12.88 -148.98 -1.92 0.18 16 2 C -0.06 0.40 3.08 71.23 0.22 0.61 16 3 Si 0.79 -4.78 30.56 68.60 2.10 -2.68 16 4 C 0.03 -0.15 6.46 41.34 0.27 0.12 16 5 C -0.21 0.38 9.32 22.01 0.21 0.59 16 6 C -0.12 -0.30 10.65 22.57 0.24 -0.06 16 7 C -0.06 -0.06 7.06 40.35 0.28 0.22 16 8 C 0.59 2.11 7.79 86.45 0.67 2.78 16 9 O -0.57 -7.26 16.48 -4.32 -0.07 -7.33 16 10 N -0.70 3.09 5.26 -444.01 -2.33 0.75 16 11 C 0.11 -0.46 4.32 45.52 0.20 -0.27 16 12 H 0.09 0.09 7.46 -2.39 -0.02 0.07 16 13 C -0.15 0.76 7.25 31.12 0.23 0.99 16 14 C -0.06 0.58 3.86 -11.02 -0.04 0.53 16 15 H 0.12 -1.63 8.09 -2.38 -0.02 -1.65 16 16 C -0.05 0.29 5.29 -19.87 -0.11 0.18 16 17 C -0.09 0.60 9.71 22.27 0.22 0.81 16 18 C -0.10 0.28 9.83 22.29 0.22 0.50 16 19 C -0.05 -0.10 6.32 22.35 0.14 0.04 16 20 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 21 C -0.04 -0.09 6.32 22.34 0.14 0.05 16 22 Cl -0.06 -0.27 27.96 -2.72 -0.08 -0.34 16 23 C -0.10 0.21 8.38 22.29 0.19 0.39 16 24 C -0.12 1.08 7.29 31.12 0.23 1.31 16 25 N -0.51 2.60 5.99 -171.93 -1.03 1.57 16 26 H 0.39 -3.18 8.70 -74.06 -0.64 -3.82 16 27 H 0.14 -1.31 7.96 -2.39 -0.02 -1.33 16 28 H -0.30 -0.45 7.11 99.48 0.71 0.26 16 29 H -0.28 0.34 7.11 99.48 0.71 1.04 16 30 H 0.16 -0.88 6.19 -2.91 -0.02 -0.90 16 31 H 0.14 0.51 8.06 -2.91 -0.02 0.49 16 32 H 0.41 -4.55 7.83 -92.71 -0.73 -5.28 16 33 H 0.10 -0.46 6.32 -2.39 -0.02 -0.48 16 34 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 35 H 0.17 -2.05 8.05 -2.91 -0.02 -2.07 16 36 H 0.16 -0.96 8.06 -2.91 -0.02 -0.98 16 37 H 0.15 -0.61 6.67 -2.91 -0.02 -0.63 16 38 H 0.09 -1.03 8.14 -2.39 -0.02 -1.05 16 39 H 0.10 -0.82 7.71 -2.39 -0.02 -0.83 16 40 H 0.43 -4.65 8.19 -92.71 -0.76 -5.41 16 Total: 0.00 -21.13 369.83 -1.07 -22.20 By element: Atomic # 1 Polarization: -21.86 SS G_CDS: -0.95 Total: -22.81 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: 3.30 Total: 8.80 kcal Atomic # 7 Polarization: 5.69 SS G_CDS: -3.37 Total: 2.32 kcal Atomic # 8 Polarization: -5.16 SS G_CDS: -1.99 Total: -7.15 kcal Atomic # 14 Polarization: -4.78 SS G_CDS: 2.10 Total: -2.68 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -0.15 Total: -0.67 kcal Total: -21.13 -1.07 -22.20 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.585 kcal (2) G-P(sol) polarization free energy of solvation -21.129 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.195 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds