Wall clock time and date at job start Tue Mar 9 2021 13:27:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33817 * 122.44683 * 2 1 4 4 C 1.50703 * 124.52400 * 359.95562 * 3 2 1 5 5 O 1.42905 * 109.46828 * 113.45282 * 4 3 2 6 6 Si 1.86291 * 109.47207 * 233.45155 * 4 3 2 7 7 S 1.70621 * 110.95098 * 179.97438 * 3 2 1 8 8 C 1.75831 * 91.56257 * 0.02562 * 7 3 2 9 9 C 1.46580 * 125.45294 * 179.97438 * 8 7 3 10 10 O 1.21705 * 119.99830 * 180.02562 * 9 8 7 11 11 N 1.34775 * 120.00363 * 0.02684 * 9 8 7 12 12 C 1.46496 * 120.00153 * 179.97438 * 11 9 8 13 13 H 1.09003 * 112.91026 * 23.75137 * 12 11 9 14 14 C 1.53785 * 113.61836 * 154.99844 * 12 11 9 15 15 C 1.53786 * 87.17102 * 89.15844 * 14 12 11 16 16 H 1.08999 * 113.61608 * 270.76046 * 15 14 12 17 17 C 1.50694 * 113.60914 * 139.94302 * 15 14 12 18 18 C 1.38203 * 119.97940 * 120.00649 * 17 15 14 19 19 C 1.38353 * 120.00019 * 179.97438 * 18 17 15 20 20 Cl 1.73595 * 120.02006 * 179.97438 * 19 18 17 21 21 C 1.38444 * 119.95906 * 359.97438 * 19 18 17 22 22 Cl 1.73598 * 120.01547 * 179.97438 * 21 19 18 23 23 C 1.38342 * 119.96570 * 359.97438 * 21 19 18 24 24 C 1.38211 * 119.99755 * 359.72791 * 23 21 19 25 25 C 1.53778 * 87.07834 * 25.39422 * 15 14 12 26 26 C 1.36645 * 109.08443 * 0.24391 * 8 7 3 27 27 H 1.09003 * 109.47632 * 85.00783 * 1 2 3 28 28 H 1.08997 * 109.47456 * 205.00545 * 1 2 3 29 29 H 1.08998 * 109.47303 * 325.00817 * 1 2 3 30 30 H 1.08991 * 109.46949 * 353.45744 * 4 3 2 31 31 H 0.96701 * 114.00279 * 179.97438 * 5 4 3 32 32 H 1.48503 * 110.00513 * 300.00111 * 6 4 3 33 33 H 1.48505 * 109.99973 * 61.32564 * 6 4 3 34 34 H 0.97001 * 119.99715 * 359.97438 * 11 9 8 35 35 H 1.09000 * 113.60917 * 334.57090 * 14 12 11 36 36 H 1.08992 * 113.61732 * 203.75257 * 14 12 11 37 37 H 1.08001 * 120.00586 * 0.02562 * 18 17 15 38 38 H 1.07997 * 120.00333 * 180.02562 * 23 21 19 39 39 H 1.07998 * 119.98054 * 180.29099 * 24 23 21 40 40 H 1.08998 * 113.61575 * 89.11710 * 25 15 14 41 41 H 1.09007 * 113.61406 * 219.93205 * 25 15 14 42 42 H 1.08000 * 123.34989 * 179.75638 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1293 0.0000 4 6 1.6354 2.5162 -0.0010 5 8 1.9418 3.1648 1.2350 6 14 2.3559 3.4963 -1.4119 7 16 3.8969 0.7892 0.0007 8 6 3.5936 -0.9427 0.0002 9 6 4.6231 -1.9862 0.0000 10 8 4.3001 -3.1596 -0.0008 11 7 5.9272 -1.6462 0.0006 12 6 6.9561 -2.6891 0.0009 13 1 6.6001 -3.6365 -0.4038 14 6 8.2981 -2.2308 -0.5939 15 6 8.6847 -1.7773 0.8239 16 1 8.3939 -0.7511 1.0486 17 6 10.1188 -2.0708 1.1814 18 6 10.9736 -1.0366 1.5127 19 6 12.2902 -1.3056 1.8415 20 17 13.3645 -0.0068 2.2570 21 6 12.7505 -2.6113 1.8391 22 17 14.4025 -2.9505 2.2508 23 6 11.8933 -3.6455 1.5083 24 6 10.5767 -3.3755 1.1860 25 6 7.6919 -2.8292 1.3460 26 6 2.2446 -1.1601 -0.0059 27 1 -0.3634 0.0894 -1.0238 28 1 -0.3634 -0.9313 0.4344 29 1 -0.3634 0.8419 0.5893 30 1 0.5538 2.4511 -0.1187 31 1 1.5929 4.0640 1.3044 32 1 3.8304 3.5923 -1.2629 33 1 2.0171 2.8493 -2.7049 34 1 6.1846 -0.7110 0.0009 35 1 8.2031 -1.4095 -1.3042 36 1 8.9102 -3.0493 -0.9726 37 1 10.6136 -0.0183 1.5156 38 1 12.2516 -4.6643 1.5066 39 1 9.9065 -4.1835 0.9324 40 1 8.1373 -3.8123 1.4982 41 1 7.1084 -2.4917 2.2026 42 1 1.8019 -2.1451 -0.0113 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:04 Heat of formation + Delta-G solvation = 5.980281 kcal Electronic energy + Delta-G solvation = -28392.410990 eV Core-core repulsion = 24097.125983 eV Total energy + Delta-G solvation = -4295.285007 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.030 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.78583 -40.75454 -39.84122 -39.03359 -37.59873 -37.54326 -37.42637 -34.77485 -32.68563 -32.15043 -31.47426 -29.98588 -27.35579 -26.77608 -25.90269 -24.40816 -24.05364 -22.81150 -22.10269 -20.47862 -19.91128 -19.39205 -18.53484 -18.43218 -17.50450 -17.33420 -17.03267 -16.63257 -16.37181 -16.10170 -15.82848 -15.70299 -15.33623 -15.20805 -14.97059 -14.76145 -14.67116 -14.38309 -14.28214 -13.85085 -13.63569 -13.46099 -13.33335 -13.16555 -13.04517 -12.97834 -12.96340 -12.66483 -12.48098 -12.42048 -12.31833 -11.98628 -11.91255 -11.88745 -11.66026 -11.41363 -11.34288 -10.61411 -10.32840 -10.02838 -9.86137 -9.64353 -9.56108 -5.11517 -0.81666 -0.16990 0.02434 0.19864 0.61597 0.76804 1.00594 1.16269 1.25213 1.58322 1.83600 1.90189 1.92207 2.31234 3.22455 3.33144 3.47878 3.51865 3.61939 3.63506 3.81389 3.83667 3.94480 3.98371 4.04774 4.14913 4.15399 4.32146 4.34602 4.45087 4.52845 4.62157 4.65853 4.70930 4.75151 4.78667 4.81110 4.89608 4.91403 4.95059 5.02998 5.05153 5.19472 5.28918 5.30716 5.49414 5.54845 6.19176 6.82893 6.88177 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.107 4.107 3 C -0.203 4.203 4 C -0.046 4.046 5 O -0.560 6.560 6 Si 0.759 3.241 7 S 0.221 5.779 8 C -0.284 4.284 9 C 0.595 3.405 10 O -0.563 6.563 11 N -0.699 5.699 12 C 0.111 3.889 13 H 0.097 0.903 14 C -0.124 4.124 15 C -0.069 4.069 16 H 0.111 0.889 17 C -0.050 4.050 18 C -0.100 4.100 19 C -0.043 4.043 20 Cl -0.060 7.060 21 C -0.052 4.052 22 Cl -0.061 7.061 23 C -0.097 4.097 24 C -0.097 4.097 25 C -0.140 4.140 26 C -0.054 4.054 27 H 0.085 0.915 28 H 0.077 0.923 29 H 0.083 0.917 30 H 0.110 0.890 31 H 0.408 0.592 32 H -0.275 1.275 33 H -0.289 1.289 34 H 0.408 0.592 35 H 0.086 0.914 36 H 0.114 0.886 37 H 0.153 0.847 38 H 0.158 0.842 39 H 0.163 0.837 40 H 0.110 0.890 41 H 0.068 0.932 42 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.010 5.429 -2.028 7.661 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.120 4.120 3 C -0.323 4.323 4 C -0.157 4.157 5 O -0.371 6.371 6 Si 0.662 3.338 7 S 0.491 5.509 8 C -0.405 4.405 9 C 0.382 3.618 10 O -0.444 6.444 11 N -0.350 5.350 12 C 0.006 3.994 13 H 0.115 0.885 14 C -0.161 4.161 15 C -0.087 4.087 16 H 0.129 0.871 17 C -0.051 4.051 18 C -0.118 4.118 19 C -0.071 4.071 20 Cl -0.031 7.031 21 C -0.080 4.080 22 Cl -0.032 7.032 23 C -0.116 4.116 24 C -0.115 4.115 25 C -0.178 4.178 26 C -0.088 4.088 27 H 0.103 0.897 28 H 0.096 0.904 29 H 0.102 0.898 30 H 0.128 0.872 31 H 0.261 0.739 32 H -0.201 1.201 33 H -0.215 1.215 34 H 0.245 0.755 35 H 0.105 0.895 36 H 0.132 0.868 37 H 0.171 0.829 38 H 0.175 0.825 39 H 0.180 0.820 40 H 0.129 0.871 41 H 0.087 0.913 42 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -2.779 5.048 -2.509 6.285 hybrid contribution -0.724 -0.947 0.458 1.277 sum -3.504 4.101 -2.052 5.771 Atomic orbital electron populations 1.20687 0.87140 1.04301 1.03674 1.18959 0.99597 0.90224 1.03244 1.23673 0.98556 0.99731 1.10300 1.24293 1.04271 0.90411 0.96755 1.86462 1.80712 1.34632 1.35312 0.94505 0.79537 0.86380 0.73417 1.82895 1.04223 0.96538 1.67263 1.24639 0.98208 0.97896 1.19729 1.17057 0.82387 0.86959 0.75420 1.90828 1.82235 1.19599 1.51689 1.45483 1.04417 1.10623 1.74451 1.22026 0.87266 0.91816 0.98278 0.88484 1.23429 0.93991 1.02998 0.95716 1.21645 0.89180 1.00814 0.97085 0.87077 1.19849 0.95552 0.92597 0.97075 1.21147 0.90098 1.01514 0.99080 1.20966 0.92991 0.88012 1.05128 1.98403 1.64629 1.48256 1.91829 1.21040 0.87703 0.93506 1.05714 1.98402 1.17587 1.95314 1.91940 1.21311 0.93052 0.99023 0.98201 1.21393 0.94797 0.97319 0.97958 1.23631 0.96699 1.00518 0.96999 1.20862 0.91142 1.00510 0.96265 0.89658 0.90405 0.89813 0.87194 0.73934 1.20116 1.21544 0.75529 0.89517 0.86810 0.82899 0.82454 0.81964 0.87137 0.91308 0.82586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.29 9.48 71.24 0.68 0.97 16 2 C -0.11 -0.27 5.78 -21.05 -0.12 -0.39 16 3 C -0.20 -0.47 4.86 24.68 0.12 -0.35 16 4 C -0.05 0.16 2.76 71.24 0.20 0.36 16 5 O -0.56 2.05 12.86 -148.98 -1.92 0.14 16 6 Si 0.76 -3.44 32.13 68.60 2.20 -1.24 16 7 S 0.22 0.53 20.83 -56.49 -1.18 -0.65 16 8 C -0.28 -1.64 6.45 24.07 0.16 -1.48 16 9 C 0.59 4.37 7.78 86.42 0.67 5.05 16 10 O -0.56 -8.17 16.44 -4.36 -0.07 -8.24 16 11 N -0.70 -0.30 5.26 -443.81 -2.33 -2.63 16 12 C 0.11 -0.23 4.33 45.58 0.20 -0.04 16 13 H 0.10 0.13 7.46 -2.39 -0.02 0.11 16 14 C -0.12 0.84 7.29 31.12 0.23 1.07 16 15 C -0.07 0.44 3.86 -11.01 -0.04 0.40 16 16 H 0.11 -0.87 8.09 -2.39 -0.02 -0.89 16 17 C -0.05 0.19 5.29 -19.87 -0.11 0.09 16 18 C -0.10 0.12 9.49 22.29 0.21 0.33 16 19 C -0.04 -0.12 6.32 22.35 0.14 0.02 16 20 Cl -0.06 -0.27 27.96 -2.72 -0.08 -0.34 16 21 C -0.05 -0.14 6.32 22.34 0.14 0.00 16 22 Cl -0.06 -0.28 27.96 -2.72 -0.08 -0.35 16 23 C -0.10 0.17 9.83 22.29 0.22 0.38 16 24 C -0.10 0.44 8.63 22.27 0.19 0.63 16 25 C -0.14 0.60 7.26 31.18 0.23 0.83 16 26 C -0.05 -0.29 9.78 21.72 0.21 -0.08 16 27 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 28 H 0.08 -0.28 8.11 -2.39 -0.02 -0.29 16 29 H 0.08 -0.42 6.99 -2.39 -0.02 -0.43 16 30 H 0.11 -0.88 6.24 -2.39 -0.01 -0.89 16 31 H 0.41 -5.83 8.74 -74.06 -0.65 -6.48 16 32 H -0.28 -0.31 7.11 99.48 0.71 0.40 16 33 H -0.29 -0.61 7.11 99.48 0.71 0.10 16 34 H 0.41 -1.49 7.82 -92.71 -0.72 -2.22 16 35 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 36 H 0.11 -0.97 7.73 -2.39 -0.02 -0.98 16 37 H 0.15 -0.64 8.05 -2.91 -0.02 -0.66 16 38 H 0.16 -0.78 8.06 -2.91 -0.02 -0.81 16 39 H 0.16 -1.51 6.63 -2.91 -0.02 -1.53 16 40 H 0.11 -0.72 6.29 -2.39 -0.02 -0.74 16 41 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 42 H 0.16 0.75 8.06 -2.91 -0.02 0.73 16 Total: 0.00 -21.00 395.88 -0.36 -21.35 By element: Atomic # 1 Polarization: -15.60 SS G_CDS: -0.23 Total: -15.83 kcal Atomic # 6 Polarization: 4.48 SS G_CDS: 3.32 Total: 7.80 kcal Atomic # 7 Polarization: -0.30 SS G_CDS: -2.33 Total: -2.63 kcal Atomic # 8 Polarization: -6.12 SS G_CDS: -1.99 Total: -8.11 kcal Atomic # 14 Polarization: -3.44 SS G_CDS: 2.20 Total: -1.24 kcal Atomic # 16 Polarization: 0.53 SS G_CDS: -1.18 Total: -0.65 kcal Atomic # 17 Polarization: -0.54 SS G_CDS: -0.15 Total: -0.70 kcal Total: -21.00 -0.36 -21.35 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.333 kcal (2) G-P(sol) polarization free energy of solvation -20.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.336 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.355 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.353 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.980 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds